Wall clock time and date at job start Sun Mar 7 2021 02:06:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38979 * 119.95523 * 2 1 4 4 O 1.35709 * 119.90873 * 359.97438 * 3 2 1 5 5 C 1.39015 * 120.17583 * 180.02562 * 3 2 1 6 6 C 1.50698 * 119.95530 * 179.97438 * 5 3 2 7 7 O 1.42898 * 109.47093 * 284.99953 * 6 5 3 8 8 Si 1.86301 * 109.47155 * 164.99964 * 6 5 3 9 9 C 1.37685 * 120.08849 * 359.95241 * 5 3 2 10 10 C 1.39750 * 119.90930 * 0.02562 * 9 5 3 11 11 C 1.47608 * 120.08425 * 180.02562 * 10 9 5 12 12 O 1.21585 * 120.00179 * 359.97438 * 11 10 9 13 13 N 1.34778 * 119.99882 * 179.97438 * 11 10 9 14 14 C 1.46505 * 120.00015 * 180.02562 * 13 11 10 15 15 H 1.09001 * 109.46836 * 324.99400 * 14 13 11 16 16 C 1.52998 * 109.47318 * 84.99873 * 14 13 11 17 17 C 1.52993 * 109.47180 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.47396 * 299.99914 * 17 16 14 19 19 H 1.08998 * 109.47163 * 300.00100 * 18 17 16 20 20 C 1.52992 * 109.47115 * 179.97438 * 18 17 16 21 21 C 1.52999 * 109.47473 * 60.00311 * 20 18 17 22 22 C 1.53002 * 109.47115 * 179.97438 * 20 18 17 23 23 C 1.52998 * 109.46887 * 59.99906 * 18 17 16 24 24 C 1.52998 * 109.46999 * 204.99787 * 14 13 11 25 25 C 1.37718 * 119.95692 * 179.72436 * 2 1 3 26 26 H 1.09002 * 109.47152 * 90.00151 * 1 2 3 27 27 H 1.09001 * 109.46980 * 330.00251 * 1 2 3 28 28 H 1.09004 * 109.47113 * 210.00232 * 1 2 3 29 29 H 0.96693 * 114.00620 * 90.00566 * 4 3 2 30 30 H 1.09001 * 109.46929 * 44.99883 * 6 5 3 31 31 H 0.96701 * 113.99986 * 299.99715 * 7 6 5 32 32 H 1.48499 * 109.99976 * 179.97438 * 8 6 5 33 33 H 1.48499 * 109.99875 * 301.31651 * 8 6 5 34 34 H 1.08000 * 120.04385 * 180.02562 * 9 5 3 35 35 H 0.97000 * 120.00178 * 359.97438 * 13 11 10 36 36 H 1.09001 * 109.47076 * 300.00013 * 16 14 13 37 37 H 1.08998 * 109.47061 * 60.00107 * 16 14 13 38 38 H 1.09002 * 109.47210 * 179.97438 * 17 16 14 39 39 H 1.09004 * 109.47394 * 59.99484 * 17 16 14 40 40 H 1.09004 * 109.47749 * 299.99615 * 20 18 17 41 41 H 1.09001 * 109.46886 * 299.99720 * 21 20 18 42 42 H 1.09002 * 109.46708 * 59.99110 * 21 20 18 43 43 H 1.09000 * 109.47712 * 179.97438 * 21 20 18 44 44 H 1.09002 * 109.46994 * 60.00067 * 22 20 18 45 45 H 1.08999 * 109.47593 * 179.97438 * 22 20 18 46 46 H 1.09007 * 109.47394 * 300.00293 * 22 20 18 47 47 H 1.09001 * 109.47076 * 180.02562 * 23 18 17 48 48 H 1.09001 * 109.47553 * 60.00272 * 23 18 17 49 49 H 1.08998 * 109.47372 * 299.99888 * 24 14 13 50 50 H 1.09002 * 109.47122 * 59.99798 * 24 14 13 51 51 H 1.08005 * 120.04651 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2095 -0.0005 6 6 4.3386 2.5180 -0.0011 7 8 4.2715 3.1043 -1.3026 8 14 6.1200 2.2159 0.4529 9 6 4.2860 0.0208 -0.0001 10 6 3.5918 -1.1921 0.0004 11 6 4.3329 -2.4687 0.0014 12 8 5.5487 -2.4659 0.0014 13 7 3.6617 -3.6375 0.0024 14 6 4.3972 -4.9045 0.0040 15 1 5.3078 -4.7968 -0.5853 16 6 4.7614 -5.2810 1.4415 17 6 5.5300 -6.6039 1.4431 18 6 4.6561 -7.7022 0.8341 19 1 3.7454 -7.8104 1.4232 20 6 5.4250 -9.0249 0.8352 21 6 5.7897 -9.4018 2.2725 22 6 4.5509 -10.1234 0.2268 23 6 4.2919 -7.3258 -0.6034 24 6 3.5227 -6.0025 -0.6047 25 6 2.1947 -1.1932 0.0057 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 0.8900 0.5138 28 1 -0.3633 -0.8900 0.5139 29 1 1.3219 2.7183 0.8826 30 1 3.8880 3.1941 0.7256 31 1 4.6550 2.5564 -2.0010 32 1 6.8681 3.4987 0.4552 33 1 6.2017 1.5772 1.7910 34 1 5.3660 0.0258 -0.0001 35 1 2.6917 -3.6397 0.0028 36 1 5.3844 -4.4987 1.8752 37 1 3.8507 -5.3888 2.0307 38 1 5.7899 -6.8718 2.4672 39 1 6.4407 -6.4957 0.8539 40 1 6.3355 -8.9165 0.2457 41 1 6.4123 -8.6193 2.7063 42 1 4.8792 -9.5102 2.8618 43 1 6.3371 -10.3443 2.2733 44 1 4.2906 -9.8553 -0.7972 45 1 5.0987 -11.0657 0.2271 46 1 3.6405 -10.2318 0.8165 47 1 3.6689 -8.1080 -1.0371 48 1 5.2025 -7.2176 -1.1926 49 1 2.6121 -6.1103 -0.0155 50 1 3.2632 -5.7343 -1.6289 51 1 1.6548 -2.1286 0.0098 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13287732.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:05 Heat of formation + Delta-G solvation = -112.502023 kcal Electronic energy + Delta-G solvation = -29389.402156 eV Core-core repulsion = 25447.036223 eV Total energy + Delta-G solvation = -3942.365933 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.198 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.77179 -40.83655 -39.67665 -37.83648 -37.51711 -36.67830 -34.31082 -33.96337 -31.97613 -31.87871 -29.38967 -28.11856 -28.08820 -26.87010 -25.12397 -23.53216 -23.47047 -22.10839 -21.42004 -21.12893 -20.64817 -19.61527 -18.74164 -18.06317 -17.57207 -16.86778 -16.64982 -16.44409 -15.97743 -15.82653 -15.53338 -15.39352 -15.22472 -15.05864 -14.77949 -14.56350 -14.44895 -14.44080 -14.23079 -14.10233 -13.94375 -13.44562 -13.36020 -13.15995 -13.07483 -12.88931 -12.82971 -12.67042 -12.32111 -12.30800 -12.15575 -12.10545 -11.99780 -11.69010 -11.64065 -11.39045 -11.23752 -11.00968 -10.81747 -10.40371 -10.10175 -10.00194 -9.68074 -4.98032 -0.39859 0.03770 1.27051 1.64583 1.70061 1.97710 2.05179 2.58936 3.01614 3.34187 3.50136 3.52272 3.60962 3.63052 3.68446 3.76433 3.90945 3.96728 4.06819 4.14129 4.23358 4.25273 4.27022 4.33692 4.39420 4.46031 4.48743 4.50445 4.58183 4.58348 4.60684 4.63502 4.74535 4.74809 4.91718 4.94718 4.95706 4.96855 5.02089 5.04288 5.05621 5.10287 5.12892 5.15012 5.23089 5.23760 5.31556 5.32843 5.44571 5.48188 5.52251 5.56630 6.43893 6.52119 6.59290 7.17855 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.118 4.118 3 C 0.159 3.841 4 O -0.483 6.483 5 C -0.152 4.152 6 C -0.055 4.055 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.045 4.045 10 C -0.138 4.138 11 C 0.561 3.439 12 O -0.531 6.531 13 N -0.723 5.723 14 C 0.145 3.855 15 H 0.091 0.909 16 C -0.129 4.129 17 C -0.114 4.114 18 C -0.084 4.084 19 H 0.071 0.929 20 C -0.093 4.093 21 C -0.151 4.151 22 C -0.151 4.151 23 C -0.113 4.113 24 C -0.127 4.127 25 C -0.066 4.066 26 H 0.076 0.924 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.392 0.608 30 H 0.112 0.888 31 H 0.378 0.622 32 H -0.250 1.250 33 H -0.255 1.255 34 H 0.145 0.855 35 H 0.398 0.602 36 H 0.068 0.932 37 H 0.063 0.937 38 H 0.069 0.931 39 H 0.065 0.935 40 H 0.070 0.930 41 H 0.058 0.942 42 H 0.053 0.947 43 H 0.053 0.947 44 H 0.057 0.943 45 H 0.053 0.947 46 H 0.053 0.947 47 H 0.072 0.928 48 H 0.066 0.934 49 H 0.068 0.932 50 H 0.070 0.930 51 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.530 -3.810 0.393 5.209 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.118 4.118 3 C 0.113 3.887 4 O -0.293 6.293 5 C -0.153 4.153 6 C -0.166 4.166 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.064 4.064 10 C -0.141 4.141 11 C 0.349 3.651 12 O -0.408 6.408 13 N -0.374 5.374 14 C 0.042 3.958 15 H 0.109 0.891 16 C -0.168 4.168 17 C -0.152 4.152 18 C -0.102 4.102 19 H 0.089 0.911 20 C -0.111 4.111 21 C -0.208 4.208 22 C -0.208 4.208 23 C -0.151 4.151 24 C -0.165 4.165 25 C -0.085 4.085 26 H 0.095 0.905 27 H 0.090 0.910 28 H 0.088 0.912 29 H 0.250 0.750 30 H 0.129 0.871 31 H 0.225 0.775 32 H -0.174 1.174 33 H -0.179 1.179 34 H 0.162 0.838 35 H 0.234 0.766 36 H 0.087 0.913 37 H 0.082 0.918 38 H 0.088 0.912 39 H 0.084 0.916 40 H 0.088 0.912 41 H 0.077 0.923 42 H 0.072 0.928 43 H 0.072 0.928 44 H 0.076 0.924 45 H 0.072 0.928 46 H 0.073 0.927 47 H 0.090 0.910 48 H 0.085 0.915 49 H 0.086 0.914 50 H 0.088 0.912 51 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -2.259 -3.215 0.696 3.991 hybrid contribution -1.215 0.153 0.728 1.425 sum -3.474 -3.062 1.424 4.845 Atomic orbital electron populations 1.20698 0.89693 1.03111 1.03161 1.20217 0.97311 0.92123 1.02174 1.18316 0.88816 0.85262 0.96272 1.84819 1.75640 1.35675 1.33204 1.20687 0.93928 0.96057 1.04600 1.24860 1.09348 0.92829 0.89541 1.86553 1.84559 1.46649 1.15872 0.94629 0.77343 0.83815 0.86433 1.20944 0.99985 0.90156 0.95286 1.19846 0.93464 0.93511 1.07272 1.18128 0.87273 0.83569 0.76175 1.90808 1.13201 1.87485 1.49302 1.46014 1.10290 1.05616 1.75529 1.21066 0.95945 0.81717 0.97120 0.89085 1.21920 1.00751 0.97856 0.96226 1.21614 0.98521 0.93502 1.01525 1.21254 0.98669 0.94116 0.96180 0.91096 1.21142 0.98693 0.94378 0.96892 1.21910 1.01451 1.01343 0.96116 1.21912 0.99788 0.98258 1.00829 1.21611 1.00509 0.96014 0.96929 1.21827 0.98706 0.94660 1.01261 1.21094 0.92610 0.97781 0.97022 0.90489 0.91033 0.91213 0.75034 0.87104 0.77498 1.17415 1.17890 0.83772 0.76623 0.91344 0.91836 0.91235 0.91613 0.91171 0.92341 0.92759 0.92759 0.92382 0.92759 0.92744 0.90973 0.91513 0.91370 0.91172 0.85015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.23 9.79 36.01 0.35 0.58 16 2 C -0.12 0.05 5.89 -104.54 -0.62 -0.56 16 3 C 0.16 0.10 6.66 -39.02 -0.26 -0.16 16 4 O -0.48 -0.15 11.84 -18.83 -0.22 -0.37 16 5 C -0.15 -0.12 5.27 -104.54 -0.55 -0.67 16 6 C -0.05 -0.03 2.37 36.00 0.09 0.05 16 7 O -0.53 -0.82 12.88 -35.23 -0.45 -1.27 16 8 Si 0.68 0.24 29.91 -169.99 -5.08 -4.84 16 9 C -0.05 -0.05 8.20 -39.22 -0.32 -0.37 16 10 C -0.14 -0.11 5.87 -104.96 -0.62 -0.72 16 11 C 0.56 1.06 7.73 -12.44 -0.10 0.97 16 12 O -0.53 -2.79 16.00 5.29 0.08 -2.70 16 13 N -0.72 0.57 5.03 -54.82 -0.28 0.30 16 14 C 0.15 -0.08 2.45 -67.93 -0.17 -0.25 16 15 H 0.09 0.13 7.58 -51.93 -0.39 -0.27 16 16 C -0.13 0.04 5.49 -26.74 -0.15 -0.11 16 17 C -0.11 0.10 4.85 -26.73 -0.13 -0.03 16 18 C -0.08 0.13 1.78 -90.62 -0.16 -0.03 16 19 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 20 C -0.09 0.11 2.51 -90.62 -0.23 -0.11 16 21 C -0.15 0.15 8.84 37.16 0.33 0.48 16 22 C -0.15 0.20 8.84 37.16 0.33 0.53 16 23 C -0.11 0.22 4.85 -26.70 -0.13 0.09 16 24 C -0.13 0.29 5.40 -26.70 -0.14 0.14 16 25 C -0.07 0.07 9.18 -39.22 -0.36 -0.29 16 26 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.07 -0.17 7.52 -51.93 -0.39 -0.56 16 28 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 29 H 0.39 -1.55 9.06 45.56 0.41 -1.14 16 30 H 0.11 0.04 7.82 -51.93 -0.41 -0.36 16 31 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 32 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 33 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 34 H 0.15 0.09 4.70 -52.49 -0.25 -0.16 16 35 H 0.40 -1.32 6.62 -40.82 -0.27 -1.59 16 36 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 37 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.07 -0.05 6.43 -51.93 -0.33 -0.39 16 39 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 40 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.06 -0.06 6.43 -51.93 -0.33 -0.39 16 42 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 44 H 0.06 -0.09 6.43 -51.93 -0.33 -0.43 16 45 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 46 H 0.05 -0.07 8.14 -51.92 -0.42 -0.49 16 47 H 0.07 -0.16 6.43 -51.93 -0.33 -0.49 16 48 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 49 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 50 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 51 H 0.13 -0.51 6.39 -52.48 -0.34 -0.84 16 LS Contribution 393.88 15.07 5.94 5.94 Total: 0.00 -7.66 393.88 -10.53 -18.19 By element: Atomic # 1 Polarization: -7.10 SS G_CDS: -7.68 Total: -14.78 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -2.83 Total: -0.45 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.28 Total: 0.30 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -0.59 Total: -4.35 kcal Atomic # 14 Polarization: 0.24 SS G_CDS: -5.08 Total: -4.84 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -7.66 -10.53 -18.19 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13287732.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.315 kcal (2) G-P(sol) polarization free energy of solvation -7.658 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.973 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.529 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.187 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.502 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds