Wall clock time and date at job start Sun Mar 7 2021 02:06:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 C 1.52999 * 109.47317 * 239.99858 * 2 1 3 5 5 H 1.09002 * 109.46716 * 60.00091 * 4 2 1 6 6 C 1.53002 * 109.47628 * 180.02562 * 4 2 1 7 7 C 1.52993 * 109.47066 * 180.02562 * 6 4 2 8 8 C 1.52997 * 109.47347 * 299.99927 * 7 6 4 9 9 H 1.09002 * 109.47045 * 300.00186 * 8 7 6 10 10 N 1.46500 * 109.47204 * 180.02562 * 8 7 6 11 11 C 1.34782 * 119.99783 * 154.99869 * 10 8 7 12 12 O 1.21549 * 120.00040 * 359.97438 * 11 10 8 13 13 C 1.47842 * 119.99919 * 180.02562 * 11 10 8 14 14 C 1.39526 * 120.55681 * 359.97438 * 13 11 10 15 15 N 1.31700 * 120.56442 * 180.02562 * 14 13 11 16 16 C 1.31929 * 121.87986 * 0.02562 * 15 14 13 17 17 C 1.38348 * 121.07658 * 0.02562 * 16 15 14 18 18 C 1.50705 * 120.34557 * 180.02562 * 17 16 15 19 19 O 1.42904 * 109.47057 * 245.00323 * 18 17 16 20 20 Si 1.86298 * 109.46996 * 5.00027 * 18 17 16 21 21 C 1.38357 * 119.30807 * 359.71991 * 17 16 15 22 22 C 1.52997 * 109.47232 * 60.00244 * 8 7 6 23 23 C 1.53002 * 109.47143 * 300.00043 * 22 8 7 24 24 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 25 25 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 26 26 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.47153 * 120.00216 * 2 1 3 28 28 H 1.09001 * 109.47066 * 60.00169 * 3 2 1 29 29 H 1.08996 * 109.47747 * 179.97438 * 3 2 1 30 30 H 1.09002 * 109.47103 * 300.00247 * 3 2 1 31 31 H 1.08996 * 109.46698 * 300.00222 * 6 4 2 32 32 H 1.09002 * 109.46838 * 59.99718 * 6 4 2 33 33 H 1.09002 * 109.47726 * 60.00012 * 7 6 4 34 34 H 1.09000 * 109.46925 * 179.97438 * 7 6 4 35 35 H 0.96997 * 120.00274 * 335.00160 * 10 8 7 36 36 H 1.07999 * 119.72140 * 359.97438 * 14 13 11 37 37 H 1.08000 * 119.45744 * 179.97438 * 16 15 14 38 38 H 1.08998 * 109.47493 * 124.99843 * 18 17 16 39 39 H 0.96693 * 114.00362 * 59.99486 * 19 18 17 40 40 H 1.48504 * 110.00138 * 180.02562 * 20 18 17 41 41 H 1.48503 * 109.99928 * 301.31947 * 20 18 17 42 42 H 1.07996 * 120.85783 * 180.29658 * 21 17 16 43 43 H 1.09002 * 109.47153 * 60.00008 * 22 8 7 44 44 H 1.09004 * 109.47261 * 180.02562 * 22 8 7 45 45 H 1.09002 * 109.47067 * 300.00018 * 23 22 8 46 46 H 1.08992 * 109.47461 * 179.97438 * 23 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 1 1.6767 -0.2074 -2.1392 6 6 3.5700 -0.7219 -1.2489 7 6 4.0799 -1.4426 -2.4985 8 6 3.5694 -2.8849 -2.4994 9 1 3.9324 -3.3993 -1.6096 10 7 4.0582 -3.5751 -3.6956 11 6 4.1864 -4.9168 -3.6943 12 8 3.8970 -5.5540 -2.7005 13 6 4.6802 -5.6134 -4.9012 14 6 5.0163 -4.8934 -6.0481 15 7 5.4557 -5.5138 -7.1235 16 6 5.5950 -6.8251 -7.1634 17 6 5.2822 -7.6101 -6.0680 18 6 5.4482 -9.1067 -6.1315 19 8 4.1684 -9.7330 -6.0213 20 14 6.2316 -9.5762 -7.7552 21 6 4.8214 -7.0064 -4.9115 22 6 2.0394 -2.8843 -2.4997 23 6 1.5294 -2.1636 -1.2501 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 -1.0277 -0.0005 27 1 1.8933 -0.5139 0.8900 28 1 1.6768 1.9562 0.8900 29 1 3.1300 1.4424 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 3.9337 0.3056 -1.2487 32 1 3.9330 -1.2359 -0.3589 33 1 3.7170 -0.9282 -3.3883 34 1 5.1699 -1.4426 -2.4985 35 1 4.2895 -3.0666 -4.4885 36 1 4.9145 -3.8182 -6.0544 37 1 5.9584 -7.2934 -8.0662 38 1 6.0860 -9.4367 -5.3115 39 1 3.5476 -9.4848 -6.7198 40 1 6.4002 -11.0498 -7.8305 41 1 5.3873 -9.1039 -8.8819 42 1 4.5744 -7.5946 -4.0402 43 1 1.6764 -2.3698 -3.3895 44 1 1.6757 -3.9119 -2.4999 45 1 1.8924 -2.6781 -0.3604 46 1 0.4395 -2.1628 -1.2505 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13287814.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:14 Heat of formation + Delta-G solvation = -53.595488 kcal Electronic energy + Delta-G solvation = -25039.972286 eV Core-core repulsion = 21508.954631 eV Total energy + Delta-G solvation = -3531.017654 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.178 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.95279 -40.83415 -39.60125 -38.09509 -36.73844 -34.42150 -33.78958 -32.93607 -31.99172 -29.56044 -28.09377 -27.34717 -25.88347 -23.99327 -23.57966 -23.53972 -21.54417 -21.24416 -20.67400 -19.25655 -18.29614 -18.00484 -17.77358 -17.02450 -16.53138 -16.45155 -15.94148 -15.86814 -15.42681 -15.24503 -15.02874 -14.78579 -14.51073 -14.46136 -14.40986 -14.24022 -14.16498 -13.47974 -13.45062 -13.15888 -12.85590 -12.83167 -12.73608 -12.34636 -12.17130 -12.11998 -12.09111 -11.69414 -11.42306 -11.38608 -11.11673 -11.05438 -10.98150 -10.73561 -10.53196 -10.40898 -10.07960 -5.09229 -0.58604 -0.03687 1.10282 1.45432 1.72970 1.83880 1.97207 2.62293 3.00090 3.21567 3.36125 3.55081 3.58927 3.60575 3.64970 3.72460 3.76981 3.93949 4.04813 4.08441 4.17732 4.23335 4.25700 4.32101 4.43871 4.44596 4.47248 4.57223 4.60363 4.73036 4.74521 4.81879 4.87750 4.91323 4.94641 4.97606 5.02133 5.07658 5.11436 5.13558 5.21439 5.27776 5.30433 5.31476 5.43634 5.47695 5.55351 6.24780 6.35089 6.60961 7.08729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.113 4.113 7 C -0.127 4.127 8 C 0.146 3.854 9 H 0.091 0.909 10 N -0.722 5.722 11 C 0.565 3.435 12 O -0.528 6.528 13 C -0.188 4.188 14 C 0.140 3.860 15 N -0.478 5.478 16 C 0.126 3.874 17 C -0.177 4.177 18 C -0.071 4.071 19 O -0.525 6.525 20 Si 0.687 3.313 21 C 0.012 3.988 22 C -0.129 4.129 23 C -0.114 4.114 24 H 0.054 0.946 25 H 0.053 0.947 26 H 0.057 0.943 27 H 0.070 0.930 28 H 0.053 0.947 29 H 0.057 0.943 30 H 0.054 0.946 31 H 0.072 0.928 32 H 0.066 0.934 33 H 0.069 0.931 34 H 0.070 0.930 35 H 0.399 0.601 36 H 0.161 0.839 37 H 0.163 0.837 38 H 0.124 0.876 39 H 0.377 0.623 40 H -0.251 1.251 41 H -0.255 1.255 42 H 0.152 0.848 43 H 0.064 0.936 44 H 0.067 0.933 45 H 0.065 0.935 46 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.903 3.634 -1.843 4.497 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.090 0.910 6 C -0.151 4.151 7 C -0.165 4.165 8 C 0.042 3.958 9 H 0.109 0.891 10 N -0.373 5.373 11 C 0.351 3.649 12 O -0.404 6.404 13 C -0.193 4.193 14 C -0.019 4.019 15 N -0.185 5.185 16 C -0.030 4.030 17 C -0.180 4.180 18 C -0.182 4.182 19 O -0.331 6.331 20 Si 0.587 3.413 21 C -0.015 4.015 22 C -0.168 4.168 23 C -0.152 4.152 24 H 0.073 0.927 25 H 0.073 0.927 26 H 0.076 0.924 27 H 0.088 0.912 28 H 0.072 0.928 29 H 0.076 0.924 30 H 0.073 0.927 31 H 0.091 0.909 32 H 0.085 0.915 33 H 0.088 0.912 34 H 0.089 0.911 35 H 0.234 0.766 36 H 0.178 0.822 37 H 0.180 0.820 38 H 0.142 0.858 39 H 0.225 0.775 40 H -0.175 1.175 41 H -0.180 1.180 42 H 0.170 0.830 43 H 0.083 0.917 44 H 0.086 0.914 45 H 0.084 0.916 46 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 2.100 2.958 -2.079 4.181 hybrid contribution -1.346 -0.149 0.330 1.394 sum 0.754 2.809 -1.748 3.393 Atomic orbital electron populations 1.21910 0.95225 1.01914 1.01774 1.21140 0.95806 0.96164 0.97999 1.21908 1.01154 0.95916 1.01804 1.21259 0.94984 0.95689 0.98297 0.91045 1.21600 0.95366 1.00738 0.97369 1.21819 1.01037 0.94013 0.99604 1.21082 0.94094 0.92541 0.88095 0.89116 1.46009 1.67447 1.06542 1.17307 1.18008 0.77647 0.82196 0.87047 1.90818 1.49574 1.65879 1.34143 1.21063 1.06552 0.95394 0.96303 1.23046 0.91306 1.00280 0.87285 1.67744 1.13083 1.10455 1.27246 1.22955 0.93199 0.89571 0.97274 1.21358 1.03251 0.98133 0.95236 1.24999 0.90106 0.88656 1.14408 1.86649 1.23069 1.69798 1.53615 0.95023 0.89067 0.82932 0.74237 1.21642 0.89262 0.92817 0.97746 1.21923 0.94715 1.01327 0.98803 1.21616 1.00889 0.94925 0.97744 0.92735 0.92747 0.92352 0.91192 0.92756 0.92376 0.92719 0.90904 0.91536 0.91240 0.91117 0.76562 0.82184 0.82001 0.85793 0.77511 1.17516 1.17989 0.83044 0.91726 0.91392 0.91635 0.91185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 8.84 37.16 0.33 0.46 16 2 C -0.09 0.11 2.51 -90.63 -0.23 -0.12 16 3 C -0.15 0.19 8.84 37.15 0.33 0.52 16 4 C -0.08 0.13 1.77 -90.62 -0.16 -0.03 16 5 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 6 C -0.11 0.22 4.85 -26.73 -0.13 0.09 16 7 C -0.13 0.29 5.39 -26.74 -0.14 0.15 16 8 C 0.15 -0.08 2.45 -67.93 -0.17 -0.25 16 9 H 0.09 0.14 7.58 -51.93 -0.39 -0.26 16 10 N -0.72 0.64 5.03 -54.75 -0.28 0.36 16 11 C 0.56 1.09 7.75 -12.33 -0.10 1.00 16 12 O -0.53 -3.02 16.08 5.32 0.09 -2.93 16 13 C -0.19 -0.14 5.89 -104.82 -0.62 -0.76 16 14 C 0.14 -0.08 10.71 -17.13 -0.18 -0.26 16 15 N -0.48 -0.35 10.35 -12.91 -0.13 -0.49 16 16 C 0.13 -0.05 9.84 -17.47 -0.17 -0.23 16 17 C -0.18 0.06 5.35 -104.53 -0.56 -0.49 16 18 C -0.07 0.08 2.82 36.01 0.10 0.18 16 19 O -0.53 -0.32 12.84 -35.23 -0.45 -0.78 16 20 Si 0.69 -1.45 29.91 -169.99 -5.08 -6.53 16 21 C 0.01 0.01 9.38 -38.87 -0.36 -0.35 16 22 C -0.13 0.03 5.50 -26.73 -0.15 -0.12 16 23 C -0.11 0.08 4.85 -26.73 -0.13 -0.05 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 25 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.06 -0.05 6.43 -51.93 -0.33 -0.38 16 27 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 29 H 0.06 -0.09 6.43 -51.93 -0.33 -0.42 16 30 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.07 -0.16 6.43 -51.93 -0.33 -0.49 16 32 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 34 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.40 -1.43 6.67 -40.82 -0.27 -1.70 16 36 H 0.16 -0.59 6.42 -52.49 -0.34 -0.93 16 37 H 0.16 -0.40 4.85 -52.49 -0.25 -0.65 16 38 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16 39 H 0.38 -0.86 8.70 45.56 0.40 -0.47 16 40 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 41 H -0.26 0.12 7.01 56.52 0.40 0.51 16 42 H 0.15 0.27 7.74 -52.49 -0.41 -0.14 16 43 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 45 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 46 H 0.07 -0.05 6.43 -51.93 -0.33 -0.38 16 LS Contribution 358.41 15.07 5.40 5.40 Total: 0.00 -6.81 358.41 -10.09 -16.90 By element: Atomic # 1 Polarization: -4.37 SS G_CDS: -7.29 Total: -11.67 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -2.34 Total: -0.26 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.41 Total: -0.12 kcal Atomic # 8 Polarization: -3.34 SS G_CDS: -0.37 Total: -3.71 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.08 Total: -6.53 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -6.81 -10.09 -16.90 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13287814.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.698 kcal (2) G-P(sol) polarization free energy of solvation -6.808 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.506 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.089 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.898 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds