Wall clock time and date at job start Sun Mar 7 2021 02:06:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36414 * 125.80222 * 2 1 4 4 C 1.47386 * 127.19142 * 0.02562 * 3 2 1 5 5 O 1.21612 * 119.99578 * 0.02562 * 4 3 2 6 6 N 1.34779 * 120.00209 * 180.02562 * 4 3 2 7 7 C 1.46495 * 120.00161 * 180.02562 * 6 4 3 8 8 H 1.09008 * 109.47004 * 34.99845 * 7 6 4 9 9 C 1.52998 * 109.47305 * 154.99961 * 7 6 4 10 10 C 1.52998 * 109.47332 * 179.97438 * 9 7 6 11 11 C 1.52994 * 109.47163 * 300.00203 * 10 9 7 12 12 H 1.08997 * 109.47373 * 299.99915 * 11 10 9 13 13 C 1.53006 * 109.47182 * 179.97438 * 11 10 9 14 14 C 1.52999 * 109.46790 * 59.99986 * 13 11 10 15 15 C 1.53004 * 109.47059 * 179.97438 * 13 11 10 16 16 C 1.52999 * 109.47270 * 60.00067 * 11 10 9 17 17 C 1.53004 * 109.46923 * 275.00038 * 7 6 4 18 18 C 1.47012 * 105.61847 * 180.02562 * 3 2 1 19 19 C 1.34178 * 105.95357 * 359.97438 * 18 3 2 20 20 C 1.50706 * 125.43605 * 179.97438 * 19 18 3 21 21 O 1.42903 * 109.47186 * 65.00390 * 20 19 18 22 22 Si 1.86302 * 109.46768 * 185.00070 * 20 19 18 23 23 O 1.33654 * 125.80412 * 180.32900 * 2 1 3 24 24 H 1.09001 * 109.47426 * 89.99652 * 1 2 3 25 25 H 1.09004 * 109.46850 * 210.00254 * 1 2 3 26 26 H 1.09000 * 109.47164 * 329.99822 * 1 2 3 27 27 H 0.97002 * 119.99313 * 0.02562 * 6 4 3 28 28 H 1.09006 * 109.47344 * 300.00003 * 9 7 6 29 29 H 1.09004 * 109.46767 * 59.99776 * 9 7 6 30 30 H 1.09008 * 109.46861 * 59.99956 * 10 9 7 31 31 H 1.09004 * 109.47190 * 179.97438 * 10 9 7 32 32 H 1.08991 * 109.47173 * 299.99859 * 13 11 10 33 33 H 1.08997 * 109.47047 * 60.00312 * 14 13 11 34 34 H 1.09007 * 109.46634 * 179.97438 * 14 13 11 35 35 H 1.08993 * 109.47369 * 299.99581 * 14 13 11 36 36 H 1.09003 * 109.46702 * 299.99711 * 15 13 11 37 37 H 1.08992 * 109.47174 * 60.00220 * 15 13 11 38 38 H 1.08998 * 109.46825 * 180.02562 * 15 13 11 39 39 H 1.08991 * 109.47366 * 59.99969 * 16 11 10 40 40 H 1.09002 * 109.47412 * 180.02562 * 16 11 10 41 41 H 1.08991 * 109.47045 * 299.99868 * 17 7 6 42 42 H 1.09001 * 109.46950 * 60.00087 * 17 7 6 43 43 H 1.08006 * 127.02785 * 180.02562 * 18 3 2 44 44 H 1.08992 * 109.47155 * 304.99987 * 20 19 18 45 45 H 0.96699 * 114.00071 * 179.97438 * 21 20 19 46 46 H 1.48503 * 110.00170 * 300.00296 * 22 20 19 47 47 H 1.48497 * 109.99882 * 61.31949 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5158 0.0005 5 8 0.6889 2.7891 0.0015 6 7 2.7930 3.5016 -0.0001 7 6 2.3645 4.9025 0.0010 8 1 1.4538 5.0035 0.5915 9 6 3.4661 5.7724 0.6098 10 6 3.0189 7.2355 0.6103 11 6 2.7483 7.6866 -0.8263 12 1 3.6590 7.5853 -1.4166 13 6 2.3005 9.1497 -0.8257 14 6 3.4018 10.0198 -0.2168 15 6 2.0305 9.6010 -2.2625 16 6 1.6466 6.8169 -1.4351 17 6 2.0935 5.3540 -1.4355 18 6 3.6848 0.5991 -0.0006 19 6 3.5859 -0.7390 -0.0004 20 6 4.7460 -1.7010 -0.0014 21 8 5.4772 -1.5666 1.2190 22 14 4.1068 -3.4443 -0.1536 23 8 2.2889 -1.0839 -0.0062 24 1 -0.3634 0.0001 -1.0277 25 1 -0.3633 -0.8900 0.5139 26 1 -0.3633 0.8900 0.5139 27 1 3.7381 3.2834 -0.0012 28 1 3.6592 5.4507 1.6332 29 1 4.3768 5.6713 0.0193 30 1 2.1081 7.3368 1.2006 31 1 3.8036 7.8551 1.0445 32 1 1.3897 9.2506 -0.2356 33 1 4.3126 9.9189 -0.8069 34 1 3.0829 11.0622 -0.2167 35 1 3.5945 9.6985 0.8068 36 1 2.9417 9.5002 -2.8522 37 1 1.2461 8.9811 -2.6967 38 1 1.7119 10.6433 -2.2621 39 1 0.7359 6.9181 -0.8449 40 1 1.4541 7.1379 -2.4588 41 1 3.0041 5.2531 -2.0260 42 1 1.3086 4.7343 -1.8692 43 1 4.5928 1.1840 -0.0004 44 1 5.4010 -1.4793 -0.8438 45 1 6.2397 -2.1574 1.2877 46 1 3.2122 -3.7589 0.9891 47 1 3.3716 -3.6056 -1.4337 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13308374.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:18 Heat of formation + Delta-G solvation = -79.647652 kcal Electronic energy + Delta-G solvation = -25966.617336 eV Core-core repulsion = 22309.439835 eV Total energy + Delta-G solvation = -3657.177502 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.182 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -43.72902 -40.96622 -39.56989 -38.01331 -36.63766 -34.41109 -33.75953 -33.13653 -31.93944 -29.92793 -29.07764 -28.06612 -25.85583 -24.54909 -23.48555 -23.40041 -21.94421 -21.30126 -20.71293 -20.32223 -18.80807 -18.34254 -17.34788 -17.26569 -16.96963 -16.35413 -15.86311 -15.77622 -15.59531 -15.29548 -15.14573 -14.80409 -14.47595 -14.46374 -14.26535 -14.16603 -14.05294 -14.03499 -13.85026 -13.40023 -13.13166 -13.11047 -12.78668 -12.68622 -12.55698 -12.29017 -12.12209 -12.10485 -12.06986 -11.65151 -11.36161 -11.20009 -10.96641 -10.86347 -10.77972 -10.54691 -9.97340 -9.52683 -5.14481 0.32209 0.84489 1.09068 1.50316 1.63063 1.98508 2.22023 2.41658 3.19183 3.50892 3.61767 3.65408 3.71691 3.74804 3.85374 3.98939 4.09900 4.10992 4.18545 4.28450 4.30240 4.37430 4.41489 4.49856 4.52962 4.55039 4.61643 4.63157 4.67135 4.76877 4.77774 4.81789 4.95335 4.97424 5.01825 5.06717 5.11234 5.12832 5.16411 5.18526 5.23645 5.26772 5.34554 5.36657 5.50079 5.56780 5.60772 5.94988 6.39879 6.57070 7.30548 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.093 3.907 3 C -0.251 4.251 4 C 0.594 3.406 5 O -0.539 6.539 6 N -0.721 5.721 7 C 0.147 3.853 8 H 0.089 0.911 9 C -0.126 4.126 10 C -0.112 4.112 11 C -0.084 4.084 12 H 0.071 0.929 13 C -0.093 4.093 14 C -0.151 4.151 15 C -0.151 4.151 16 C -0.113 4.113 17 C -0.128 4.128 18 C -0.142 4.142 19 C -0.015 4.015 20 C -0.035 4.035 21 O -0.543 6.543 22 Si 0.708 3.292 23 O -0.176 6.176 24 H 0.092 0.908 25 H 0.080 0.920 26 H 0.113 0.887 27 H 0.400 0.600 28 H 0.069 0.931 29 H 0.068 0.932 30 H 0.065 0.935 31 H 0.072 0.928 32 H 0.070 0.930 33 H 0.054 0.946 34 H 0.053 0.947 35 H 0.057 0.943 36 H 0.053 0.947 37 H 0.058 0.942 38 H 0.053 0.947 39 H 0.065 0.935 40 H 0.069 0.931 41 H 0.063 0.937 42 H 0.067 0.933 43 H 0.160 0.840 44 H 0.095 0.905 45 H 0.391 0.609 46 H -0.249 1.249 47 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.504 -1.321 -1.039 5.755 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.040 3.960 3 C -0.255 4.255 4 C 0.383 3.617 5 O -0.418 6.418 6 N -0.371 5.371 7 C 0.043 3.957 8 H 0.107 0.893 9 C -0.164 4.164 10 C -0.150 4.150 11 C -0.102 4.102 12 H 0.089 0.911 13 C -0.111 4.111 14 C -0.208 4.208 15 C -0.208 4.208 16 C -0.151 4.151 17 C -0.167 4.167 18 C -0.162 4.162 19 C -0.062 4.062 20 C -0.144 4.144 21 O -0.351 6.351 22 Si 0.608 3.392 23 O -0.074 6.074 24 H 0.110 0.890 25 H 0.099 0.901 26 H 0.131 0.869 27 H 0.234 0.766 28 H 0.088 0.912 29 H 0.086 0.914 30 H 0.084 0.916 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.073 0.927 34 H 0.072 0.928 35 H 0.076 0.924 36 H 0.073 0.927 37 H 0.077 0.923 38 H 0.072 0.928 39 H 0.083 0.917 40 H 0.088 0.912 41 H 0.081 0.919 42 H 0.086 0.914 43 H 0.177 0.823 44 H 0.113 0.887 45 H 0.240 0.760 46 H -0.173 1.173 47 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 3.403 -1.473 -0.998 3.840 hybrid contribution 0.661 0.613 -0.104 0.908 sum 4.064 -0.860 -1.102 4.298 Atomic orbital electron populations 1.20707 0.83277 1.05453 1.04751 1.22945 0.94072 0.82785 0.96193 1.21149 0.93122 0.93909 1.17364 1.17127 0.85476 0.83588 0.75534 1.90769 1.16490 1.83961 1.50549 1.45867 1.09640 1.05961 1.75626 1.21034 0.98640 0.79003 0.97036 0.89265 1.21814 0.97963 0.95394 1.01271 1.21599 1.01929 0.94587 0.96920 1.21254 0.98738 0.94023 0.96191 0.91084 1.21143 0.98882 0.94192 0.96889 1.21909 0.98548 0.99484 1.00838 1.21908 1.01686 1.01086 0.96120 1.21604 0.98430 0.93620 1.01474 1.21910 1.01836 0.96653 0.96296 1.22541 0.96500 0.93213 1.03908 1.21045 0.82107 0.94192 1.08900 1.23790 0.91706 1.08341 0.90591 1.86464 1.45930 1.66209 1.36491 0.95296 0.85186 0.77409 0.81342 1.83687 1.16483 1.35407 1.71790 0.88958 0.90145 0.86873 0.76610 0.91224 0.91363 0.91577 0.90979 0.91195 0.92738 0.92764 0.92380 0.92747 0.92347 0.92765 0.91669 0.91249 0.91863 0.91400 0.82285 0.88720 0.76019 1.17320 1.17715 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.15 9.89 36.01 0.36 0.21 16 2 C 0.09 0.36 7.37 -34.97 -0.26 0.11 16 3 C -0.25 -0.93 6.31 -103.28 -0.65 -1.58 16 4 C 0.59 2.39 7.78 -12.54 -0.10 2.30 16 5 O -0.54 -3.55 14.51 5.27 0.08 -3.47 16 6 N -0.72 -0.87 5.07 -54.89 -0.28 -1.15 16 7 C 0.15 0.12 2.45 -67.93 -0.17 -0.05 16 8 H 0.09 0.25 7.58 -51.92 -0.39 -0.15 16 9 C -0.13 0.13 5.39 -26.73 -0.14 -0.02 16 10 C -0.11 0.12 4.85 -26.74 -0.13 -0.01 16 11 C -0.08 0.07 1.78 -90.62 -0.16 -0.09 16 12 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 13 C -0.09 0.06 2.51 -90.61 -0.23 -0.17 16 14 C -0.15 0.12 8.84 37.16 0.33 0.45 16 15 C -0.15 0.08 8.84 37.16 0.33 0.40 16 16 C -0.11 0.00 4.85 -26.75 -0.13 -0.13 16 17 C -0.13 -0.10 5.49 -26.75 -0.15 -0.25 16 18 C -0.14 -0.31 10.48 -37.46 -0.39 -0.70 16 19 C -0.01 -0.04 6.22 -35.74 -0.22 -0.26 16 20 C -0.03 0.02 2.97 36.01 0.11 0.13 16 21 O -0.54 0.43 12.86 -35.23 -0.45 -0.02 16 22 Si 0.71 -0.75 32.09 -169.99 -5.46 -6.21 16 23 O -0.18 -0.77 8.90 7.67 0.07 -0.70 16 24 H 0.09 0.07 8.14 -51.93 -0.42 -0.36 16 25 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 26 H 0.11 0.30 6.48 -51.93 -0.34 -0.04 16 27 H 0.40 -0.37 7.77 -40.82 -0.32 -0.69 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.07 -0.03 8.14 -51.92 -0.42 -0.46 16 31 H 0.07 -0.10 6.43 -51.93 -0.33 -0.43 16 32 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 33 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.06 -0.06 6.43 -51.93 -0.33 -0.39 16 36 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 37 H 0.06 -0.03 6.43 -51.93 -0.33 -0.36 16 38 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.07 -0.01 6.43 -51.93 -0.33 -0.34 16 41 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 43 H 0.16 -0.08 7.74 -52.48 -0.41 -0.48 16 44 H 0.10 -0.30 7.96 -51.93 -0.41 -0.72 16 45 H 0.39 -2.45 8.74 45.56 0.40 -2.06 16 46 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 47 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 LS Contribution 369.64 15.07 5.57 5.57 Total: 0.00 -7.68 369.64 -10.00 -17.68 By element: Atomic # 1 Polarization: -4.11 SS G_CDS: -7.92 Total: -12.03 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -1.61 Total: 0.33 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -0.28 Total: -1.15 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -0.31 Total: -4.19 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.46 Total: -6.21 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -7.68 -10.00 -17.68 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13308374.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.971 kcal (2) G-P(sol) polarization free energy of solvation -7.676 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.676 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds