Wall clock time and date at job start Sun Mar 7 2021 02:06:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53008 * 109.46950 * 2 1 4 4 C 1.52994 * 109.47132 * 120.00138 * 2 1 3 5 5 H 1.09002 * 109.47200 * 299.99954 * 4 2 1 6 6 C 1.53000 * 109.47430 * 59.99914 * 4 2 1 7 7 C 1.52994 * 109.47430 * 180.02562 * 6 4 2 8 8 C 1.53000 * 109.47132 * 300.00085 * 7 6 4 9 9 H 1.08998 * 109.47285 * 299.99594 * 8 7 6 10 10 N 1.46504 * 109.46870 * 179.97438 * 8 7 6 11 11 C 1.34777 * 119.99817 * 85.00481 * 10 8 7 12 12 O 1.21582 * 120.00175 * 359.97438 * 11 10 8 13 13 C 1.47534 * 119.99626 * 179.97438 * 11 10 8 14 14 C 1.40137 * 120.18905 * 179.97438 * 13 11 10 15 15 O 1.35658 * 120.15273 * 0.24875 * 14 13 11 16 16 C 1.38715 * 119.69969 * 179.97438 * 14 13 11 17 17 C 1.38055 * 120.08380 * 0.02562 * 16 14 13 18 18 C 1.50698 * 119.80154 * 180.02562 * 17 16 14 19 19 O 1.42897 * 109.47506 * 64.99953 * 18 17 16 20 20 Si 1.86307 * 109.46665 * 184.99801 * 18 17 16 21 21 C 1.38549 * 120.38663 * 359.97438 * 17 16 14 22 22 C 1.37782 * 120.30634 * 0.02562 * 21 17 16 23 23 C 1.53005 * 109.47126 * 60.00186 * 8 7 6 24 24 C 1.53001 * 109.47124 * 180.02562 * 4 2 1 25 25 H 1.08998 * 109.47285 * 300.00268 * 1 2 3 26 26 H 1.09003 * 109.46826 * 59.99805 * 1 2 3 27 27 H 1.08991 * 109.47291 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47227 * 240.00477 * 2 1 3 29 29 H 1.08993 * 109.47285 * 300.00278 * 3 2 1 30 30 H 1.09002 * 109.47094 * 60.00222 * 3 2 1 31 31 H 1.09005 * 109.46789 * 179.97438 * 3 2 1 32 32 H 1.09005 * 109.46871 * 300.00582 * 6 4 2 33 33 H 1.09002 * 109.46897 * 59.99854 * 6 4 2 34 34 H 1.08995 * 109.47286 * 180.02562 * 7 6 4 35 35 H 1.09002 * 109.47200 * 60.00039 * 7 6 4 36 36 H 0.97001 * 120.00233 * 264.99970 * 10 8 7 37 37 H 0.96693 * 114.00154 * 269.72866 * 15 14 13 38 38 H 1.08004 * 119.95768 * 179.97438 * 16 14 13 39 39 H 1.09003 * 109.47084 * 304.99100 * 18 17 16 40 40 H 0.96692 * 114.00366 * 59.99593 * 19 18 17 41 41 H 1.48495 * 109.99655 * 179.97438 * 20 18 17 42 42 H 1.48499 * 109.99660 * 301.31505 * 20 18 17 43 43 H 1.08002 * 119.84422 * 180.02562 * 21 17 16 44 44 H 1.07998 * 120.04745 * 179.97438 * 22 21 17 45 45 H 1.08994 * 109.46943 * 59.99979 * 23 8 7 46 46 H 1.08992 * 109.47164 * 179.97438 * 23 8 7 47 47 H 1.08991 * 109.47618 * 60.00099 * 24 4 2 48 48 H 1.08998 * 109.46965 * 299.99394 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 1.2492 5 1 1.6767 -0.2074 2.1392 6 6 1.5300 -2.1638 1.2492 7 6 2.0395 -2.8848 2.4987 8 6 3.5695 -2.8848 2.4994 9 1 3.9332 -3.3988 1.6097 10 7 4.0572 -3.5748 3.6962 11 6 4.1860 -4.9164 3.6951 12 8 3.8969 -5.5541 2.7012 13 6 4.6778 -5.6111 4.9002 14 6 4.8127 -7.0059 4.9038 15 8 4.4965 -7.7239 3.7971 16 6 5.2765 -7.6486 6.0422 17 6 5.6028 -6.9162 7.1660 18 6 6.1067 -7.6209 8.3991 19 8 7.3664 -8.2335 8.1165 20 14 6.3121 -6.3865 9.7794 21 6 5.4708 -5.5370 7.1663 22 6 5.0116 -4.8822 6.0444 23 6 4.0795 -1.4423 2.4994 24 6 3.5700 -0.7207 1.2495 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 1.8933 -0.5137 -0.8900 29 1 1.6766 1.9564 -0.8899 30 1 1.6767 1.9564 0.8900 31 1 3.1300 1.4426 0.0005 32 1 0.4400 -2.1637 1.2491 33 1 1.8933 -2.6776 0.3592 34 1 1.6765 -3.9126 2.4985 35 1 1.6758 -2.3709 3.3885 36 1 4.2876 -3.0660 4.4893 37 1 3.5749 -8.0153 3.7673 38 1 5.3817 -8.7235 6.0496 39 1 5.3899 -8.3854 8.6991 40 1 8.0538 -7.6111 7.8426 41 1 6.8080 -7.0691 11.0014 42 1 7.2627 -5.3214 9.3708 43 1 5.7290 -4.9726 8.0502 44 1 4.9099 -3.8070 6.0494 45 1 3.7158 -0.9284 3.3892 46 1 5.1694 -1.4423 2.5004 47 1 3.9330 0.3070 1.2498 48 1 3.9337 -1.2343 0.3596 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13422076.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:27 Heat of formation + Delta-G solvation = -104.803904 kcal Electronic energy + Delta-G solvation = -27272.828054 eV Core-core repulsion = 23486.333555 eV Total energy + Delta-G solvation = -3786.494499 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.69177 -40.60157 -39.44431 -38.44493 -37.22167 -36.57168 -34.25382 -32.69407 -31.96303 -31.12297 -29.54469 -28.08311 -27.38151 -24.33833 -23.97299 -23.50632 -23.03414 -21.43918 -21.25623 -20.65838 -19.44134 -18.66421 -18.30753 -17.55895 -16.76367 -16.54791 -16.31163 -16.23443 -15.99762 -15.69288 -15.32166 -15.23801 -15.14280 -14.94994 -14.60077 -14.49340 -14.29228 -14.17324 -13.75522 -13.44450 -13.32435 -13.14030 -12.93095 -12.81007 -12.69252 -12.41609 -12.31117 -12.14978 -12.10336 -12.08477 -11.68162 -11.60777 -11.37884 -11.18871 -10.98286 -10.81034 -10.59444 -10.16706 -9.98636 -9.79505 -5.06949 -0.41019 0.09400 1.14473 1.48534 1.78002 1.87167 2.09375 2.58582 3.09573 3.26304 3.42082 3.58557 3.60489 3.63983 3.69363 3.78047 3.96654 3.97988 4.08775 4.19546 4.26044 4.27758 4.34476 4.35358 4.46781 4.50055 4.55496 4.59353 4.62835 4.67870 4.75461 4.75864 4.92809 4.95327 4.95583 4.98705 5.03616 5.07223 5.13221 5.14710 5.15960 5.18339 5.24378 5.32369 5.34243 5.47896 5.51285 5.53343 5.57788 6.28226 6.49318 6.70848 7.26244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.083 4.083 5 H 0.071 0.929 6 C -0.114 4.114 7 C -0.128 4.128 8 C 0.146 3.854 9 H 0.089 0.911 10 N -0.726 5.726 11 C 0.558 3.442 12 O -0.517 6.517 13 C -0.163 4.163 14 C 0.172 3.828 15 O -0.476 6.476 16 C -0.129 4.129 17 C -0.075 4.075 18 C -0.081 4.081 19 O -0.526 6.526 20 Si 0.690 3.310 21 C -0.137 4.137 22 C -0.065 4.065 23 C -0.126 4.126 24 C -0.113 4.113 25 H 0.054 0.946 26 H 0.053 0.947 27 H 0.058 0.942 28 H 0.070 0.930 29 H 0.053 0.947 30 H 0.054 0.946 31 H 0.057 0.943 32 H 0.069 0.931 33 H 0.065 0.935 34 H 0.067 0.933 35 H 0.063 0.937 36 H 0.397 0.603 37 H 0.398 0.602 38 H 0.140 0.860 39 H 0.122 0.878 40 H 0.378 0.622 41 H -0.255 1.255 42 H -0.258 1.258 43 H 0.136 0.864 44 H 0.134 0.866 45 H 0.068 0.932 46 H 0.069 0.931 47 H 0.072 0.928 48 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.496 4.664 3.561 6.376 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.152 4.152 7 C -0.166 4.166 8 C 0.042 3.958 9 H 0.107 0.893 10 N -0.378 5.378 11 C 0.346 3.654 12 O -0.393 6.393 13 C -0.167 4.167 14 C 0.125 3.875 15 O -0.287 6.287 16 C -0.147 4.147 17 C -0.076 4.076 18 C -0.190 4.190 19 O -0.332 6.332 20 Si 0.591 3.409 21 C -0.155 4.155 22 C -0.084 4.084 23 C -0.164 4.164 24 C -0.151 4.151 25 H 0.073 0.927 26 H 0.072 0.928 27 H 0.077 0.923 28 H 0.088 0.912 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.076 0.924 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.086 0.914 35 H 0.082 0.918 36 H 0.232 0.768 37 H 0.256 0.744 38 H 0.158 0.842 39 H 0.140 0.860 40 H 0.225 0.775 41 H -0.180 1.180 42 H -0.183 1.183 43 H 0.153 0.847 44 H 0.151 0.849 45 H 0.087 0.913 46 H 0.087 0.913 47 H 0.090 0.910 48 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -1.903 4.125 3.387 5.666 hybrid contribution 0.619 -0.001 -0.195 0.649 sum -1.284 4.124 3.192 5.370 Atomic orbital electron populations 1.21906 0.95220 1.01913 1.01757 1.21143 0.95807 0.96149 0.98028 1.21911 1.01151 0.95933 1.01785 1.21250 0.94972 0.95712 0.98245 0.91074 1.21615 1.00834 0.94907 0.97824 1.21908 0.94824 1.01227 0.98658 1.21033 0.93994 0.92410 0.88318 0.89282 1.46025 1.67976 1.06740 1.17049 1.18041 0.77960 0.82092 0.87351 1.90832 1.48908 1.65686 1.33886 1.20458 1.06798 0.94172 0.95273 1.18518 0.94691 0.88351 0.85895 1.84769 1.33476 1.71695 1.38770 1.21358 1.00745 1.01339 0.91283 1.20378 0.97516 0.93623 0.96062 1.25154 0.87764 1.05494 1.00615 1.86631 1.20321 1.37200 1.89097 0.94951 0.90403 0.78055 0.77459 1.20993 1.02017 0.93732 0.98759 1.21143 0.95998 0.99753 0.91516 1.21823 1.00955 0.94184 0.99485 1.21611 0.95382 1.00676 0.97416 0.92734 0.92770 0.92343 0.91202 0.92759 0.92734 0.92394 0.91226 0.91669 0.91429 0.91812 0.76751 0.74375 0.84214 0.85974 0.77453 1.18030 1.18329 0.84675 0.84876 0.91342 0.91266 0.90978 0.91571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 8.84 37.16 0.33 0.47 16 2 C -0.09 0.10 2.51 -90.62 -0.23 -0.13 16 3 C -0.15 0.18 8.84 37.16 0.33 0.51 16 4 C -0.08 0.12 1.77 -90.62 -0.16 -0.05 16 5 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 6 C -0.11 0.08 4.85 -26.73 -0.13 -0.05 16 7 C -0.13 0.02 5.49 -26.73 -0.15 -0.12 16 8 C 0.15 -0.02 2.45 -67.93 -0.17 -0.18 16 9 H 0.09 0.20 7.58 -51.93 -0.39 -0.19 16 10 N -0.73 0.27 5.03 -54.84 -0.28 -0.01 16 11 C 0.56 1.44 7.73 -12.47 -0.10 1.35 16 12 O -0.52 -3.22 14.82 -16.58 -0.25 -3.47 16 13 C -0.16 -0.19 5.89 -104.85 -0.62 -0.81 16 14 C 0.17 0.33 6.72 -38.69 -0.26 0.07 16 15 O -0.48 -1.40 11.58 -40.55 -0.47 -1.87 16 16 C -0.13 -0.08 9.60 -39.47 -0.38 -0.46 16 17 C -0.08 0.06 5.35 -104.58 -0.56 -0.50 16 18 C -0.08 0.10 2.79 36.00 0.10 0.20 16 19 O -0.53 -0.33 12.83 -35.23 -0.45 -0.78 16 20 Si 0.69 -1.53 29.87 -169.99 -5.08 -6.60 16 21 C -0.14 0.25 8.64 -39.63 -0.34 -0.09 16 22 C -0.07 0.10 9.54 -39.20 -0.37 -0.27 16 23 C -0.13 0.24 5.39 -26.70 -0.14 0.09 16 24 C -0.11 0.18 4.86 -26.70 -0.13 0.05 16 25 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.06 -0.05 6.43 -51.93 -0.33 -0.38 16 28 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.08 6.43 -51.93 -0.33 -0.41 16 32 H 0.07 -0.05 6.43 -51.93 -0.33 -0.38 16 33 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 35 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.40 -1.23 6.63 -40.82 -0.27 -1.50 16 37 H 0.40 -0.34 9.06 45.56 0.41 0.07 16 38 H 0.14 0.05 8.06 -52.48 -0.42 -0.38 16 39 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 40 H 0.38 -0.81 8.70 45.56 0.40 -0.41 16 41 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 42 H -0.26 0.13 7.00 56.52 0.40 0.53 16 43 H 0.14 -0.51 4.81 -52.49 -0.25 -0.77 16 44 H 0.13 -0.60 6.40 -52.49 -0.34 -0.94 16 45 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 46 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 47 H 0.07 -0.14 6.43 -51.93 -0.33 -0.47 16 48 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 LS Contribution 372.12 15.07 5.61 5.61 Total: 0.00 -7.81 372.12 -10.78 -18.59 By element: Atomic # 1 Polarization: -4.64 SS G_CDS: -6.89 Total: -11.54 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: -2.98 Total: 0.07 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.28 Total: -0.01 kcal Atomic # 8 Polarization: -4.95 SS G_CDS: -1.17 Total: -6.12 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.08 Total: -6.60 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -7.81 -10.78 -18.59 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13422076.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.217 kcal (2) G-P(sol) polarization free energy of solvation -7.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.587 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.804 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds