Wall clock time and date at job start Sun Mar 7 2021 02:06:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53008 * 109.46950 * 2 1 4 4 C 1.52994 * 109.47132 * 120.00138 * 2 1 3 5 5 H 1.09002 * 109.47200 * 299.99954 * 4 2 1 6 6 C 1.53000 * 109.47430 * 59.99914 * 4 2 1 7 7 C 1.52994 * 109.47430 * 180.02562 * 6 4 2 8 8 C 1.53000 * 109.47132 * 300.00085 * 7 6 4 9 9 H 1.08998 * 109.47285 * 299.99594 * 8 7 6 10 10 N 1.46504 * 109.46870 * 179.97438 * 8 7 6 11 11 C 1.34777 * 119.99817 * 85.00481 * 10 8 7 12 12 O 1.21582 * 120.00175 * 359.97438 * 11 10 8 13 13 C 1.47534 * 119.99626 * 179.97438 * 11 10 8 14 14 C 1.40137 * 120.18905 * 179.97438 * 13 11 10 15 15 O 1.35658 * 120.15273 * 0.24875 * 14 13 11 16 16 C 1.38715 * 119.69969 * 179.97438 * 14 13 11 17 17 C 1.38055 * 120.08380 * 0.02562 * 16 14 13 18 18 C 1.50698 * 119.80154 * 180.02562 * 17 16 14 19 19 O 1.42897 * 109.47506 * 64.99953 * 18 17 16 20 20 Si 1.86307 * 109.46665 * 184.99801 * 18 17 16 21 21 C 1.38549 * 120.38663 * 359.97438 * 17 16 14 22 22 C 1.37782 * 120.30634 * 0.02562 * 21 17 16 23 23 C 1.53005 * 109.47126 * 60.00186 * 8 7 6 24 24 C 1.53001 * 109.47124 * 180.02562 * 4 2 1 25 25 H 1.08998 * 109.47285 * 300.00268 * 1 2 3 26 26 H 1.09003 * 109.46826 * 59.99805 * 1 2 3 27 27 H 1.08991 * 109.47291 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47227 * 240.00477 * 2 1 3 29 29 H 1.08993 * 109.47285 * 300.00278 * 3 2 1 30 30 H 1.09002 * 109.47094 * 60.00222 * 3 2 1 31 31 H 1.09005 * 109.46789 * 179.97438 * 3 2 1 32 32 H 1.09005 * 109.46871 * 300.00582 * 6 4 2 33 33 H 1.09002 * 109.46897 * 59.99854 * 6 4 2 34 34 H 1.08995 * 109.47286 * 180.02562 * 7 6 4 35 35 H 1.09002 * 109.47200 * 60.00039 * 7 6 4 36 36 H 0.97001 * 120.00233 * 264.99970 * 10 8 7 37 37 H 0.96693 * 114.00154 * 269.72866 * 15 14 13 38 38 H 1.08004 * 119.95768 * 179.97438 * 16 14 13 39 39 H 1.09003 * 109.47084 * 304.99100 * 18 17 16 40 40 H 0.96692 * 114.00366 * 59.99593 * 19 18 17 41 41 H 1.48495 * 109.99655 * 179.97438 * 20 18 17 42 42 H 1.48499 * 109.99660 * 301.31505 * 20 18 17 43 43 H 1.08002 * 119.84422 * 180.02562 * 21 17 16 44 44 H 1.07998 * 120.04745 * 179.97438 * 22 21 17 45 45 H 1.08994 * 109.46943 * 59.99979 * 23 8 7 46 46 H 1.08992 * 109.47164 * 179.97438 * 23 8 7 47 47 H 1.08991 * 109.47618 * 60.00099 * 24 4 2 48 48 H 1.08998 * 109.46965 * 299.99394 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 1.2492 5 1 1.6767 -0.2074 2.1392 6 6 1.5300 -2.1638 1.2492 7 6 2.0395 -2.8848 2.4987 8 6 3.5695 -2.8848 2.4994 9 1 3.9332 -3.3988 1.6097 10 7 4.0572 -3.5748 3.6962 11 6 4.1860 -4.9164 3.6951 12 8 3.8969 -5.5541 2.7012 13 6 4.6778 -5.6111 4.9002 14 6 4.8127 -7.0059 4.9038 15 8 4.4965 -7.7239 3.7971 16 6 5.2765 -7.6486 6.0422 17 6 5.6028 -6.9162 7.1660 18 6 6.1067 -7.6209 8.3991 19 8 7.3664 -8.2335 8.1165 20 14 6.3121 -6.3865 9.7794 21 6 5.4708 -5.5370 7.1663 22 6 5.0116 -4.8822 6.0444 23 6 4.0795 -1.4423 2.4994 24 6 3.5700 -0.7207 1.2495 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 1.8933 -0.5137 -0.8900 29 1 1.6766 1.9564 -0.8899 30 1 1.6767 1.9564 0.8900 31 1 3.1300 1.4426 0.0005 32 1 0.4400 -2.1637 1.2491 33 1 1.8933 -2.6776 0.3592 34 1 1.6765 -3.9126 2.4985 35 1 1.6758 -2.3709 3.3885 36 1 4.2876 -3.0660 4.4893 37 1 3.5749 -8.0153 3.7673 38 1 5.3817 -8.7235 6.0496 39 1 5.3899 -8.3854 8.6991 40 1 8.0538 -7.6111 7.8426 41 1 6.8080 -7.0691 11.0014 42 1 7.2627 -5.3214 9.3708 43 1 5.7290 -4.9726 8.0502 44 1 4.9099 -3.8070 6.0494 45 1 3.7158 -0.9284 3.3892 46 1 5.1694 -1.4423 2.5004 47 1 3.9330 0.3070 1.2498 48 1 3.9337 -1.2343 0.3596 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_13422076.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:26 Heat of formation + Delta-G solvation = -102.870454 kcal Electronic energy + Delta-G solvation = -27272.744214 eV Core-core repulsion = 23486.333555 eV Total energy + Delta-G solvation = -3786.410658 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.74407 -40.58335 -39.48801 -38.49698 -37.24025 -36.61375 -34.30388 -32.66596 -31.90313 -31.11243 -29.52465 -28.00087 -27.34648 -24.32872 -23.92232 -23.45307 -23.02965 -21.51846 -21.22407 -20.59438 -19.47185 -18.69234 -18.31006 -17.59421 -16.74941 -16.57924 -16.29965 -16.23568 -15.99840 -15.74470 -15.29045 -15.22393 -15.11316 -14.84952 -14.57637 -14.50530 -14.29544 -14.15819 -13.74862 -13.38592 -13.29406 -13.05983 -12.90655 -12.75937 -12.64855 -12.37895 -12.29027 -12.15053 -12.08557 -12.02743 -11.63110 -11.57709 -11.31218 -11.18003 -10.95685 -10.83241 -10.62143 -10.21213 -9.99148 -9.78506 -4.89916 -0.41719 0.14516 1.28394 1.62071 1.71386 1.99542 2.05738 2.56847 3.11810 3.37598 3.48592 3.64971 3.67240 3.71618 3.75226 3.83915 4.03535 4.07739 4.13809 4.26869 4.30672 4.33758 4.39532 4.43575 4.52168 4.55474 4.62773 4.66577 4.68659 4.75498 4.81757 4.83789 5.01517 5.02625 5.02879 5.04512 5.10144 5.12611 5.17560 5.20464 5.21492 5.23738 5.30601 5.38007 5.38638 5.51497 5.56170 5.59842 5.64333 6.44629 6.49646 6.70231 7.18551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.149 4.149 4 C -0.076 4.076 5 H 0.079 0.921 6 C -0.111 4.111 7 C -0.121 4.121 8 C 0.148 3.852 9 H 0.059 0.941 10 N -0.710 5.710 11 C 0.554 3.446 12 O -0.565 6.565 13 C -0.179 4.179 14 C 0.151 3.849 15 O -0.499 6.499 16 C -0.140 4.140 17 C -0.070 4.070 18 C -0.095 4.095 19 O -0.549 6.549 20 Si 0.783 3.217 21 C -0.132 4.132 22 C -0.053 4.053 23 C -0.118 4.118 24 C -0.112 4.112 25 H 0.057 0.943 26 H 0.051 0.949 27 H 0.055 0.945 28 H 0.061 0.939 29 H 0.050 0.950 30 H 0.057 0.943 31 H 0.061 0.939 32 H 0.070 0.930 33 H 0.050 0.950 34 H 0.042 0.958 35 H 0.078 0.922 36 H 0.414 0.586 37 H 0.407 0.593 38 H 0.134 0.866 39 H 0.128 0.872 40 H 0.388 0.612 41 H -0.307 1.307 42 H -0.271 1.271 43 H 0.163 0.837 44 H 0.168 0.832 45 H 0.088 0.912 46 H 0.073 0.927 47 H 0.082 0.918 48 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.341 6.881 5.285 8.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.206 4.206 4 C -0.095 4.095 5 H 0.097 0.903 6 C -0.149 4.149 7 C -0.160 4.160 8 C 0.043 3.957 9 H 0.077 0.923 10 N -0.362 5.362 11 C 0.342 3.658 12 O -0.445 6.445 13 C -0.183 4.183 14 C 0.104 3.896 15 O -0.312 6.312 16 C -0.158 4.158 17 C -0.071 4.071 18 C -0.203 4.203 19 O -0.357 6.357 20 Si 0.687 3.313 21 C -0.149 4.149 22 C -0.071 4.071 23 C -0.156 4.156 24 C -0.150 4.150 25 H 0.076 0.924 26 H 0.070 0.930 27 H 0.074 0.926 28 H 0.079 0.921 29 H 0.069 0.931 30 H 0.076 0.924 31 H 0.080 0.920 32 H 0.089 0.911 33 H 0.069 0.931 34 H 0.061 0.939 35 H 0.096 0.904 36 H 0.252 0.748 37 H 0.267 0.733 38 H 0.152 0.848 39 H 0.145 0.855 40 H 0.237 0.763 41 H -0.236 1.236 42 H -0.197 1.197 43 H 0.180 0.820 44 H 0.186 0.814 45 H 0.106 0.894 46 H 0.091 0.909 47 H 0.100 0.900 48 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -1.758 6.375 5.106 8.355 hybrid contribution 0.585 -0.742 -0.701 1.177 sum -1.174 5.633 4.404 7.246 Atomic orbital electron populations 1.21904 0.95315 1.01767 1.01797 1.21130 0.95731 0.96384 0.97870 1.21896 1.01387 0.95539 1.01792 1.21187 0.95133 0.94825 0.98324 0.90303 1.21583 1.00868 0.95457 0.97027 1.21831 0.94723 0.99964 0.99439 1.20987 0.94011 0.93310 0.87352 0.92294 1.45897 1.66821 1.05926 1.17572 1.18354 0.77403 0.82788 0.87235 1.90805 1.51199 1.66803 1.35663 1.20473 1.08077 0.93945 0.95788 1.18779 0.95784 0.88989 0.86019 1.84723 1.34525 1.72136 1.39816 1.21352 1.01537 1.01281 0.91643 1.20490 0.96799 0.94271 0.95527 1.25499 0.87340 1.06400 1.01017 1.86602 1.21249 1.38548 1.89339 0.93956 0.88564 0.75669 0.73120 1.21276 1.00929 0.93222 0.99522 1.21491 0.94170 1.01309 0.90175 1.21778 1.01150 0.92563 1.00119 1.21609 0.95119 1.01107 0.97191 0.92385 0.93019 0.92598 0.92076 0.93119 0.92357 0.92005 0.91111 0.93097 0.93883 0.90359 0.74808 0.73347 0.84812 0.85474 0.76298 1.23586 1.19745 0.82018 0.81428 0.89360 0.90876 0.89968 0.92690 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 8.84 71.98 0.64 0.90 16 2 C -0.09 0.19 2.51 -10.79 -0.03 0.16 16 3 C -0.15 0.44 8.84 71.98 0.64 1.08 16 4 C -0.08 0.24 1.77 -10.80 -0.02 0.22 16 5 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 6 C -0.11 0.06 4.85 30.59 0.15 0.21 16 7 C -0.12 -0.03 5.49 30.59 0.17 0.14 16 8 C 0.15 0.03 2.45 44.99 0.11 0.14 16 9 H 0.06 0.40 7.58 -2.39 -0.02 0.38 16 10 N -0.71 0.72 5.03 -445.70 -2.24 -1.52 16 11 C 0.55 3.47 7.73 86.69 0.67 4.14 16 12 O -0.57 -8.59 14.82 16.94 0.25 -8.34 16 13 C -0.18 -0.48 5.89 -20.01 -0.12 -0.60 16 14 C 0.15 0.82 6.72 22.85 0.15 0.98 16 15 O -0.50 -4.36 11.58 -68.82 -0.80 -5.15 16 16 C -0.14 -0.32 9.60 22.34 0.21 -0.10 16 17 C -0.07 0.15 5.35 -19.83 -0.11 0.05 16 18 C -0.09 0.29 2.79 71.24 0.20 0.49 16 19 O -0.55 -0.74 12.83 -148.98 -1.91 -2.65 16 20 Si 0.78 -4.55 29.87 68.60 2.05 -2.50 16 21 C -0.13 0.77 8.64 22.24 0.19 0.96 16 22 C -0.05 0.27 9.54 22.52 0.21 0.48 16 23 C -0.12 0.58 5.39 30.61 0.17 0.75 16 24 C -0.11 0.42 4.86 30.61 0.15 0.57 16 25 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 26 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 27 H 0.06 -0.07 6.43 -2.39 -0.02 -0.09 16 28 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 29 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 30 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.06 -0.23 6.43 -2.38 -0.02 -0.24 16 32 H 0.07 -0.05 6.43 -2.38 -0.02 -0.07 16 33 H 0.05 0.12 8.14 -2.39 -0.02 0.10 16 34 H 0.04 0.24 8.14 -2.39 -0.02 0.22 16 35 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 36 H 0.41 -3.39 6.63 -92.71 -0.61 -4.01 16 37 H 0.41 0.66 9.06 -74.06 -0.67 -0.01 16 38 H 0.13 0.35 8.06 -2.91 -0.02 0.33 16 39 H 0.13 -0.56 7.96 -2.39 -0.02 -0.58 16 40 H 0.39 -1.71 8.70 -74.06 -0.64 -2.36 16 41 H -0.31 -0.94 7.11 99.48 0.71 -0.24 16 42 H -0.27 0.95 7.00 99.48 0.70 1.64 16 43 H 0.16 -1.80 4.81 -2.91 -0.01 -1.82 16 44 H 0.17 -2.11 6.40 -2.91 -0.02 -2.13 16 45 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 46 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 47 H 0.08 -0.44 6.43 -2.39 -0.02 -0.45 16 48 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 Total: 0.00 -21.15 372.12 -0.18 -21.32 By element: Atomic # 1 Polarization: -10.81 SS G_CDS: -0.91 Total: -11.73 kcal Atomic # 6 Polarization: 7.18 SS G_CDS: 3.39 Total: 10.56 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -2.24 Total: -1.52 kcal Atomic # 8 Polarization: -13.69 SS G_CDS: -2.46 Total: -16.15 kcal Atomic # 14 Polarization: -4.55 SS G_CDS: 2.05 Total: -2.50 kcal Total: -21.15 -0.18 -21.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13422076.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.546 kcal (2) G-P(sol) polarization free energy of solvation -21.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.694 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.176 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.325 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds