Wall clock time and date at job start Sun Mar 7 2021 02:06:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37783 * 119.85238 * 2 1 4 4 C 1.39704 * 119.91068 * 180.02562 * 3 2 1 5 5 C 1.47534 * 120.19563 * 179.97438 * 4 3 2 6 6 O 1.21585 * 120.00269 * 179.97438 * 5 4 3 7 7 N 1.34773 * 119.99676 * 359.97438 * 5 4 3 8 8 C 1.46504 * 120.00111 * 179.97438 * 7 5 4 9 9 H 1.09001 * 109.46891 * 325.00262 * 8 7 5 10 10 C 1.53006 * 109.46883 * 84.99828 * 8 7 5 11 11 C 1.52997 * 109.47127 * 180.02562 * 10 8 7 12 12 C 1.53000 * 109.47060 * 300.00449 * 11 10 8 13 13 H 1.09001 * 109.47194 * 299.99650 * 12 11 10 14 14 C 1.53001 * 109.46886 * 180.02562 * 12 11 10 15 15 C 1.52996 * 109.47486 * 59.99437 * 14 12 11 16 16 C 1.53000 * 109.46886 * 180.02562 * 14 12 11 17 17 C 1.52996 * 109.47328 * 60.00126 * 12 11 10 18 18 C 1.52997 * 109.47417 * 204.99914 * 8 7 5 19 19 C 1.40137 * 119.61601 * 0.25052 * 4 3 2 20 20 O 1.35651 * 120.15257 * 179.72701 * 19 4 3 21 21 C 1.38712 * 119.69702 * 359.51820 * 19 4 3 22 22 C 1.50703 * 119.95556 * 180.25159 * 21 19 4 23 23 O 1.42901 * 109.47144 * 75.23945 * 22 21 19 24 24 Si 1.86305 * 109.47075 * 195.23572 * 22 21 19 25 25 C 1.38051 * 120.08484 * 0.48717 * 21 19 4 26 26 H 1.09007 * 109.46976 * 89.99811 * 1 2 3 27 27 H 1.09000 * 109.47462 * 209.99652 * 1 2 3 28 28 H 1.08999 * 109.47276 * 330.00450 * 1 2 3 29 29 H 1.08002 * 120.04679 * 359.97438 * 3 2 1 30 30 H 0.97003 * 120.00265 * 359.97438 * 7 5 4 31 31 H 1.08998 * 109.46505 * 59.99948 * 10 8 7 32 32 H 1.08996 * 109.46884 * 300.00829 * 10 8 7 33 33 H 1.09002 * 109.47153 * 180.02562 * 11 10 8 34 34 H 1.09001 * 109.46832 * 60.00321 * 11 10 8 35 35 H 1.09001 * 109.47109 * 299.99380 * 14 12 11 36 36 H 1.09001 * 109.46997 * 60.00430 * 15 14 12 37 37 H 1.09000 * 109.47054 * 180.02562 * 15 14 12 38 38 H 1.08996 * 109.47452 * 300.00003 * 15 14 12 39 39 H 1.09001 * 109.47583 * 60.00267 * 16 14 12 40 40 H 1.09004 * 109.46724 * 179.97438 * 16 14 12 41 41 H 1.08992 * 109.47098 * 299.99158 * 16 14 12 42 42 H 1.08992 * 109.47554 * 59.99639 * 17 12 11 43 43 H 1.09004 * 109.47108 * 179.97438 * 17 12 11 44 44 H 1.09002 * 109.47045 * 60.00127 * 18 8 7 45 45 H 1.09001 * 109.47375 * 300.00052 * 18 8 7 46 46 H 0.96702 * 114.00437 * 89.99866 * 20 19 4 47 47 H 1.08998 * 109.47257 * 315.23360 * 22 21 19 48 48 H 0.96694 * 114.00320 * 59.99292 * 23 22 21 49 49 H 1.48499 * 110.00348 * 180.02562 * 24 22 21 50 50 H 1.48504 * 109.99931 * 301.32117 * 24 22 21 51 51 H 1.08003 * 119.80500 * 179.76834 * 25 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5899 1.1964 -0.0005 5 6 4.3306 2.4723 -0.0011 6 8 5.5464 2.4695 -0.0011 7 7 3.6595 3.6411 -0.0016 8 6 4.3949 4.9081 -0.0016 9 1 5.3052 4.7998 0.5882 10 6 4.7603 5.2857 -1.4387 11 6 5.5289 6.6086 -1.4387 12 6 4.6545 7.7064 -0.8294 13 1 3.7443 7.8151 -1.4191 14 6 5.4230 9.0295 -0.8300 15 6 5.7878 9.4068 -2.2671 16 6 4.5489 10.1272 -0.2201 17 6 4.2893 7.3289 0.6076 18 6 3.5201 6.0057 0.6074 19 6 4.2836 -0.0212 -0.0064 20 8 5.6401 -0.0325 -0.0126 21 6 3.5770 -1.2148 -0.0015 22 6 4.3172 -2.5275 -0.0020 23 8 4.8552 -2.7715 1.2992 24 14 3.1441 -3.9017 -0.4565 25 6 2.1965 -1.2017 -0.0010 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3634 -0.8900 0.5138 28 1 -0.3634 0.8900 0.5137 29 1 1.6512 2.1294 -0.0004 30 1 2.6894 3.6434 -0.0020 31 1 3.8500 5.3939 -2.0284 32 1 5.3834 4.5037 -1.8725 33 1 5.7887 6.8778 -2.4625 34 1 6.4391 6.4999 -0.8490 35 1 6.3334 8.9211 -0.2405 36 1 4.8774 9.5152 -2.8566 37 1 6.3357 10.3491 -2.2674 38 1 6.4107 8.6247 -2.7012 39 1 4.2895 9.8582 0.8038 40 1 5.0965 11.0696 -0.2202 41 1 3.6383 10.2357 -0.8092 42 1 5.1995 7.2202 1.1972 43 1 3.6668 8.1112 1.0418 44 1 3.2599 5.7367 1.6311 45 1 2.6099 6.1140 0.0176 46 1 6.0375 -0.0377 0.8690 47 1 5.1283 -2.4870 -0.7290 48 1 4.1885 -2.8201 1.9977 49 1 3.8617 -5.2018 -0.4600 50 1 2.0166 -3.9470 0.5088 51 1 1.6509 -2.1337 -0.0010 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13422088.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:30 Heat of formation + Delta-G solvation = -110.149289 kcal Electronic energy + Delta-G solvation = -29601.357828 eV Core-core repulsion = 25659.093917 eV Total energy + Delta-G solvation = -3942.263911 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.198 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.75794 -40.65880 -39.42799 -38.00329 -37.72377 -36.54642 -34.26399 -33.12973 -32.67218 -31.94362 -29.42068 -28.07187 -27.67581 -26.79050 -25.32430 -23.52564 -23.48863 -22.07624 -21.34896 -21.10105 -20.61173 -19.55930 -18.33918 -18.11280 -17.42911 -16.89736 -16.84165 -16.30803 -16.00191 -15.76142 -15.63867 -15.37196 -15.19489 -14.96547 -14.91622 -14.65388 -14.49426 -14.41275 -14.26144 -14.14720 -13.66084 -13.41338 -13.35486 -13.14003 -13.10633 -12.79862 -12.73936 -12.59976 -12.29416 -12.21836 -12.13168 -12.08101 -11.77837 -11.68505 -11.63373 -11.36450 -11.17154 -10.96670 -10.80776 -10.46361 -10.18343 -9.94304 -9.52722 -5.01748 -0.32713 0.04479 1.21418 1.49351 1.79636 1.90025 2.12638 2.59858 3.21370 3.33191 3.45551 3.53288 3.61284 3.64651 3.66725 3.77166 3.97299 4.04998 4.08401 4.10209 4.25852 4.27326 4.29658 4.36981 4.48414 4.50704 4.52084 4.53956 4.56520 4.60706 4.64454 4.73180 4.76642 4.77307 4.91023 4.93532 4.94626 4.96899 5.00522 5.05697 5.10216 5.15191 5.17934 5.18719 5.26164 5.29846 5.34400 5.36330 5.49336 5.54074 5.56999 5.60073 6.34720 6.51703 6.79000 7.29172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.559 3.441 6 O -0.517 6.517 7 N -0.726 5.726 8 C 0.147 3.853 9 H 0.089 0.911 10 C -0.129 4.129 11 C -0.114 4.114 12 C -0.083 4.083 13 H 0.071 0.929 14 C -0.093 4.093 15 C -0.151 4.151 16 C -0.150 4.150 17 C -0.113 4.113 18 C -0.126 4.126 19 C 0.191 3.809 20 O -0.472 6.472 21 C -0.150 4.150 22 C -0.071 4.071 23 O -0.527 6.527 24 Si 0.693 3.307 25 C -0.082 4.082 26 H 0.077 0.923 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.131 0.869 30 H 0.397 0.603 31 H 0.063 0.937 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.064 0.936 35 H 0.069 0.931 36 H 0.054 0.946 37 H 0.053 0.947 38 H 0.058 0.942 39 H 0.057 0.943 40 H 0.053 0.947 41 H 0.054 0.946 42 H 0.065 0.935 43 H 0.071 0.929 44 H 0.068 0.932 45 H 0.068 0.932 46 H 0.399 0.601 47 H 0.123 0.877 48 H 0.374 0.626 49 H -0.254 1.254 50 H -0.259 1.259 51 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.655 1.711 -0.037 6.872 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.086 4.086 4 C -0.167 4.167 5 C 0.346 3.654 6 O -0.392 6.392 7 N -0.378 5.378 8 C 0.043 3.957 9 H 0.107 0.893 10 C -0.167 4.167 11 C -0.152 4.152 12 C -0.102 4.102 13 H 0.089 0.911 14 C -0.111 4.111 15 C -0.208 4.208 16 C -0.208 4.208 17 C -0.151 4.151 18 C -0.164 4.164 19 C 0.144 3.856 20 O -0.283 6.283 21 C -0.151 4.151 22 C -0.180 4.180 23 O -0.333 6.333 24 Si 0.594 3.406 25 C -0.100 4.100 26 H 0.096 0.904 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.148 0.852 30 H 0.232 0.768 31 H 0.082 0.918 32 H 0.087 0.913 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.088 0.912 36 H 0.073 0.927 37 H 0.072 0.928 38 H 0.077 0.923 39 H 0.076 0.924 40 H 0.072 0.928 41 H 0.073 0.927 42 H 0.084 0.916 43 H 0.090 0.910 44 H 0.087 0.913 45 H 0.086 0.914 46 H 0.257 0.743 47 H 0.141 0.859 48 H 0.221 0.779 49 H -0.179 1.179 50 H -0.184 1.184 51 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.620 0.969 -0.711 5.747 hybrid contribution -0.364 0.315 1.604 1.674 sum -5.984 1.284 0.893 6.185 Atomic orbital electron populations 1.20834 0.90062 1.03357 1.03072 1.19785 0.96730 0.92280 1.00965 1.21128 0.92166 0.98266 0.97035 1.20418 0.93933 0.93569 1.08828 1.18025 0.87343 0.83331 0.76673 1.90835 1.12965 1.87248 1.48190 1.46023 1.10152 1.05579 1.76078 1.21024 0.95826 0.81765 0.97073 0.89320 1.21917 1.00735 0.97814 0.96259 1.21614 0.98500 0.93531 1.01510 1.21252 0.98676 0.94111 0.96149 0.91086 1.21142 0.98688 0.94384 0.96905 1.21906 1.01456 1.01346 0.96097 1.21908 0.99795 0.98259 1.00804 1.21607 1.00474 0.96012 0.96963 1.21823 0.98730 0.94692 1.01170 1.18229 0.83993 0.89673 0.93695 1.84685 1.14063 1.95864 1.33668 1.20620 0.93931 0.95714 1.04821 1.24978 1.05730 0.98915 0.88403 1.86641 1.36779 1.93502 1.16348 0.94824 0.78007 0.77483 0.90311 1.21170 0.92921 0.98536 0.97389 0.90430 0.91131 0.91116 0.85169 0.76805 0.91849 0.91331 0.91221 0.91676 0.91210 0.92737 0.92767 0.92326 0.92406 0.92766 0.92733 0.91583 0.90995 0.91295 0.91362 0.74253 0.85877 0.77906 1.17922 1.18384 0.84666 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.40 10.00 36.00 0.36 0.76 16 2 C -0.10 0.13 5.87 -104.67 -0.61 -0.48 16 3 C -0.07 0.06 9.18 -39.20 -0.36 -0.30 16 4 C -0.16 -0.28 5.89 -104.85 -0.62 -0.90 16 5 C 0.56 1.73 7.73 -12.47 -0.10 1.63 16 6 O -0.52 -3.47 14.82 -16.59 -0.25 -3.72 16 7 N -0.73 -0.06 5.03 -54.85 -0.28 -0.34 16 8 C 0.15 0.04 2.45 -67.93 -0.17 -0.13 16 9 H 0.09 0.21 7.58 -51.93 -0.39 -0.18 16 10 C -0.13 -0.07 5.49 -26.73 -0.15 -0.22 16 11 C -0.11 0.02 4.85 -26.73 -0.13 -0.11 16 12 C -0.08 0.09 1.77 -90.62 -0.16 -0.07 16 13 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 14 C -0.09 0.07 2.51 -90.62 -0.23 -0.15 16 15 C -0.15 0.09 8.84 37.16 0.33 0.42 16 16 C -0.15 0.15 8.84 37.16 0.33 0.48 16 17 C -0.11 0.16 4.85 -26.71 -0.13 0.03 16 18 C -0.13 0.21 5.39 -26.71 -0.14 0.07 16 19 C 0.19 0.47 6.69 -38.69 -0.26 0.21 16 20 O -0.47 -1.79 10.90 -40.53 -0.44 -2.24 16 21 C -0.15 -0.09 5.27 -104.51 -0.55 -0.64 16 22 C -0.07 -0.02 2.38 36.01 0.09 0.06 16 23 O -0.53 -0.60 12.88 -35.23 -0.45 -1.05 16 24 Si 0.69 -0.75 30.24 -169.99 -5.14 -5.89 16 25 C -0.08 0.07 8.30 -39.54 -0.33 -0.26 16 26 H 0.08 -0.31 8.14 -51.92 -0.42 -0.73 16 27 H 0.07 -0.26 8.08 -51.93 -0.42 -0.68 16 28 H 0.07 -0.29 8.08 -51.93 -0.42 -0.71 16 29 H 0.13 -0.47 6.40 -52.49 -0.34 -0.80 16 30 H 0.40 -1.01 6.63 -40.82 -0.27 -1.28 16 31 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 33 H 0.07 -0.01 6.43 -51.93 -0.33 -0.34 16 34 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 36 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.06 -0.03 6.43 -51.93 -0.33 -0.36 16 39 H 0.06 -0.07 6.43 -51.93 -0.33 -0.41 16 40 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.07 -0.13 6.43 -51.93 -0.33 -0.46 16 44 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 45 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 46 H 0.40 0.54 9.06 45.56 0.41 0.95 16 47 H 0.12 0.12 7.82 -51.93 -0.41 -0.28 16 48 H 0.37 -0.75 8.70 45.56 0.40 -0.35 16 49 H -0.25 -0.59 7.11 56.52 0.40 -0.18 16 50 H -0.26 0.02 6.68 56.52 0.38 0.40 16 51 H 0.14 -0.32 4.83 -52.48 -0.25 -0.57 16 LS Contribution 392.73 15.07 5.92 5.92 Total: 0.00 -7.13 392.73 -11.21 -18.34 By element: Atomic # 1 Polarization: -3.68 SS G_CDS: -7.74 Total: -11.42 kcal Atomic # 6 Polarization: 3.23 SS G_CDS: -2.83 Total: 0.40 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.28 Total: -0.34 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -1.14 Total: -7.01 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.14 Total: -5.89 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -7.13 -11.21 -18.34 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13422088.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.809 kcal (2) G-P(sol) polarization free energy of solvation -7.130 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.340 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.149 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds