Wall clock time and date at job start Sun Mar 7 2021 02:06:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.37865 * 126.45514 * 2 1 4 4 C 1.46674 * 126.23675 * 359.97438 * 3 2 1 5 5 O 1.21695 * 120.00339 * 359.97438 * 4 3 2 6 6 N 1.34784 * 119.99994 * 179.71627 * 4 3 2 7 7 C 1.46499 * 119.99971 * 179.97438 * 6 4 3 8 8 H 1.09007 * 109.46956 * 325.00197 * 7 6 4 9 9 C 1.52995 * 109.47022 * 84.99732 * 7 6 4 10 10 C 1.53005 * 109.47228 * 179.97438 * 9 7 6 11 11 C 1.52999 * 109.47076 * 300.00529 * 10 9 7 12 12 H 1.08996 * 109.46825 * 299.99460 * 11 10 9 13 13 C 1.53005 * 109.47076 * 180.02562 * 11 10 9 14 14 C 1.52995 * 109.47228 * 59.99471 * 13 11 10 15 15 C 1.52999 * 109.47076 * 180.02562 * 13 11 10 16 16 C 1.52996 * 109.47151 * 59.99647 * 11 10 9 17 17 C 1.52999 * 109.47155 * 205.00183 * 7 6 4 18 18 N 1.37661 * 107.53119 * 179.71903 * 3 2 1 19 19 C 1.35532 * 108.64366 * 0.25875 * 18 3 2 20 20 C 1.50702 * 125.56348 * 179.97438 * 19 18 3 21 21 O 1.42895 * 109.46905 * 300.00075 * 20 19 18 22 22 Si 1.86303 * 109.46940 * 180.02562 * 20 19 18 23 23 C 1.35461 * 108.87094 * 0.02562 * 19 18 3 24 24 H 1.09002 * 109.47192 * 89.99901 * 1 2 3 25 25 H 1.08996 * 109.47031 * 210.00136 * 1 2 3 26 26 H 1.08995 * 109.46792 * 330.00195 * 1 2 3 27 27 H 0.96999 * 120.00044 * 0.02562 * 6 4 3 28 28 H 1.09001 * 109.47831 * 300.00098 * 9 7 6 29 29 H 1.08996 * 109.47227 * 60.00172 * 9 7 6 30 30 H 1.08996 * 109.47630 * 180.02562 * 10 9 7 31 31 H 1.09007 * 109.46829 * 60.00417 * 10 9 7 32 32 H 1.09001 * 109.46476 * 299.99720 * 13 11 10 33 33 H 1.08999 * 109.47672 * 300.00652 * 14 13 11 34 34 H 1.09003 * 109.46913 * 59.99961 * 14 13 11 35 35 H 1.08996 * 109.47285 * 179.97438 * 14 13 11 36 36 H 1.08996 * 109.47227 * 59.99342 * 15 13 11 37 37 H 1.08996 * 109.47133 * 180.02562 * 15 13 11 38 38 H 1.09003 * 109.46786 * 299.99868 * 15 13 11 39 39 H 1.09006 * 109.46787 * 180.02562 * 16 11 10 40 40 H 1.09003 * 109.47095 * 60.00411 * 16 11 10 41 41 H 1.08996 * 109.46825 * 299.99663 * 17 7 6 42 42 H 1.08993 * 109.47204 * 60.00070 * 17 7 6 43 43 H 0.97001 * 125.67639 * 180.29788 * 18 3 2 44 44 H 1.08997 * 109.46864 * 60.00053 * 20 19 18 45 45 H 0.96703 * 114.00187 * 299.99827 * 21 20 19 46 46 H 1.48499 * 109.99964 * 58.68027 * 22 20 19 47 47 H 1.48500 * 109.99967 * 179.97438 * 22 20 19 48 48 H 1.07996 * 126.06549 * 179.97438 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5092 -0.0005 5 8 0.7027 2.7766 -0.0015 6 7 2.8038 3.4999 0.0053 7 6 2.3679 4.8985 0.0042 8 1 1.4593 4.9955 -0.5901 9 6 2.0883 5.3467 1.4401 10 6 1.6337 6.8076 1.4391 11 6 2.7339 7.6836 0.8364 12 1 3.6423 7.5863 1.4308 13 6 2.2795 9.1447 0.8359 14 6 2.0004 9.5924 2.2720 15 6 3.3794 10.0206 0.2326 16 6 3.0134 7.2354 -0.5995 17 6 3.4676 5.7749 -0.5987 18 7 3.6284 0.6624 0.0064 19 6 3.6218 -0.6929 0.0046 20 6 4.8434 -1.5753 0.0094 21 8 5.6298 -1.3066 -1.1531 22 14 4.3183 -3.3628 0.0036 23 6 2.3379 -1.1247 -0.0035 24 1 -0.3634 0.0000 -1.0277 25 1 -0.3633 -0.8899 0.5138 26 1 -0.3633 0.8900 0.5138 27 1 3.7501 3.2868 0.0095 28 1 1.3049 4.7223 1.8697 29 1 2.9969 5.2497 2.0344 30 1 1.4350 7.1271 2.4620 31 1 0.7252 6.9050 0.8447 32 1 1.3709 9.2423 0.2418 33 1 1.2167 8.9683 2.7014 34 1 2.9090 9.4946 2.8662 35 1 1.6771 10.6333 2.2717 36 1 3.5778 9.7014 -0.7905 37 1 3.0559 11.0614 0.2327 38 1 4.2882 9.9229 0.8264 39 1 3.7975 7.8593 -1.0287 40 1 2.1049 7.3328 -1.1939 41 1 4.3761 5.6780 -0.0044 42 1 3.6667 5.4557 -1.6216 43 1 4.4191 1.2243 0.0120 44 1 5.4344 -1.3728 0.9026 45 1 5.1663 -1.4655 -1.9868 46 1 3.4854 -3.6436 -1.1934 47 1 5.5139 -4.2435 0.0077 48 1 2.0137 -2.1549 -0.0072 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:52 Heat of formation + Delta-G solvation = -56.456207 kcal Electronic energy + Delta-G solvation = -25913.088074 eV Core-core repulsion = 22354.634891 eV Total energy + Delta-G solvation = -3558.453183 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.57648 -40.88264 -39.51142 -37.92408 -36.69839 -34.35208 -33.34779 -31.99284 -31.73459 -29.57234 -28.11808 -28.09630 -26.75203 -24.10605 -23.54387 -22.29507 -21.61908 -21.30322 -20.73328 -20.26562 -19.46062 -18.19632 -17.37231 -16.79377 -16.57499 -16.19987 -15.89780 -15.47844 -15.37010 -15.25724 -15.02129 -14.82625 -14.55565 -14.39396 -14.25474 -14.14566 -13.86364 -13.56371 -13.46869 -13.44950 -13.15916 -12.91793 -12.82176 -12.71940 -12.34439 -12.23810 -12.16616 -12.11800 -11.88213 -11.68995 -11.39887 -11.24019 -11.04943 -10.98003 -10.73057 -10.10001 -9.80855 -9.14241 -4.98699 0.39180 1.10642 1.56556 1.59552 1.82350 2.05239 2.16893 2.40572 3.17914 3.51046 3.57033 3.60354 3.68930 3.86745 3.94271 4.06071 4.17091 4.21808 4.22893 4.25566 4.32564 4.38741 4.44591 4.47850 4.56994 4.60934 4.72827 4.74266 4.76298 4.85930 4.90598 4.94442 4.96933 5.01979 5.04249 5.07611 5.11373 5.14069 5.21432 5.23918 5.30327 5.31643 5.40033 5.46756 5.50780 5.55192 5.67481 5.92696 6.19663 6.26804 6.48310 7.19282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.065 4.065 3 C -0.056 4.056 4 C 0.591 3.409 5 O -0.521 6.521 6 N -0.730 5.730 7 C 0.148 3.852 8 H 0.091 0.909 9 C -0.128 4.128 10 C -0.114 4.114 11 C -0.084 4.084 12 H 0.070 0.930 13 C -0.093 4.093 14 C -0.151 4.151 15 C -0.151 4.151 16 C -0.113 4.113 17 C -0.127 4.127 18 N -0.525 5.525 19 C 0.026 3.974 20 C -0.061 4.061 21 O -0.535 6.535 22 Si 0.717 3.283 23 C -0.199 4.199 24 H 0.068 0.932 25 H 0.066 0.934 26 H 0.081 0.919 27 H 0.392 0.608 28 H 0.069 0.931 29 H 0.062 0.938 30 H 0.070 0.930 31 H 0.065 0.935 32 H 0.070 0.930 33 H 0.058 0.942 34 H 0.053 0.947 35 H 0.054 0.946 36 H 0.057 0.943 37 H 0.054 0.946 38 H 0.053 0.947 39 H 0.072 0.928 40 H 0.066 0.934 41 H 0.067 0.933 42 H 0.068 0.932 43 H 0.416 0.584 44 H 0.120 0.880 45 H 0.380 0.620 46 H -0.255 1.255 47 H -0.255 1.255 48 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.325 0.055 1.323 2.675 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.073 4.073 3 C -0.168 4.168 4 C 0.378 3.622 5 O -0.397 6.397 6 N -0.381 5.381 7 C 0.044 3.956 8 H 0.109 0.891 9 C -0.167 4.167 10 C -0.151 4.151 11 C -0.102 4.102 12 H 0.089 0.911 13 C -0.111 4.111 14 C -0.208 4.208 15 C -0.208 4.208 16 C -0.150 4.150 17 C -0.165 4.165 18 N -0.121 5.121 19 C -0.092 4.092 20 C -0.170 4.170 21 O -0.341 6.341 22 Si 0.616 3.384 23 C -0.224 4.224 24 H 0.087 0.913 25 H 0.085 0.915 26 H 0.100 0.900 27 H 0.225 0.775 28 H 0.088 0.912 29 H 0.081 0.919 30 H 0.088 0.912 31 H 0.084 0.916 32 H 0.088 0.912 33 H 0.077 0.923 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.076 0.924 37 H 0.073 0.927 38 H 0.072 0.928 39 H 0.090 0.910 40 H 0.085 0.915 41 H 0.085 0.915 42 H 0.087 0.913 43 H 0.253 0.747 44 H 0.138 0.862 45 H 0.228 0.772 46 H -0.179 1.179 47 H -0.180 1.180 48 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.037 -0.204 1.332 2.443 hybrid contribution 1.224 0.754 -1.034 1.771 sum 3.261 0.550 0.297 3.321 Atomic orbital electron populations 1.20392 0.88844 1.03286 1.02490 1.19939 0.96049 0.90330 1.00987 1.20274 0.83510 0.93604 1.19451 1.17032 0.85920 0.82942 0.76258 1.90837 1.15862 1.83122 1.49831 1.46012 1.09146 1.06515 1.76428 1.21043 0.98603 0.78784 0.97200 0.89093 1.21916 1.01835 0.96782 0.96155 1.21616 0.98426 0.93526 1.01582 1.21254 0.98726 0.94086 0.96146 0.91123 1.21141 0.98870 0.94143 0.96948 1.21906 1.01680 1.01136 0.96085 1.21909 0.98556 0.99495 1.00828 1.21589 1.01934 0.94511 0.97009 1.21807 0.97930 0.95537 1.01185 1.41854 1.07149 1.06558 1.56544 1.21034 0.96798 0.83295 1.08042 1.24910 0.91641 1.09151 0.91333 1.86590 1.42009 1.89521 1.15993 0.94243 0.82147 0.72435 0.89600 1.20605 0.90824 0.99117 1.11864 0.91339 0.91540 0.90001 0.77466 0.91246 0.91932 0.91173 0.91596 0.91170 0.92312 0.92757 0.92736 0.92403 0.92730 0.92754 0.90976 0.91508 0.91460 0.91310 0.74656 0.86224 0.77164 1.17886 1.18031 0.83217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.18 9.83 36.01 0.35 0.17 16 2 C -0.06 -0.15 6.21 -104.16 -0.65 -0.80 16 3 C -0.06 -0.11 7.06 -81.98 -0.58 -0.69 16 4 C 0.59 1.64 7.75 -12.85 -0.10 1.54 16 5 O -0.52 -3.10 14.47 5.19 0.08 -3.03 16 6 N -0.73 0.11 5.07 -55.11 -0.28 -0.17 16 7 C 0.15 -0.01 2.45 -67.93 -0.17 -0.17 16 8 H 0.09 0.18 7.58 -51.92 -0.39 -0.21 16 9 C -0.13 -0.01 5.49 -26.73 -0.15 -0.16 16 10 C -0.11 0.06 4.85 -26.73 -0.13 -0.07 16 11 C -0.08 0.10 1.77 -90.62 -0.16 -0.06 16 12 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 13 C -0.09 0.09 2.51 -90.62 -0.23 -0.14 16 14 C -0.15 0.12 8.84 37.16 0.33 0.45 16 15 C -0.15 0.16 8.84 37.16 0.33 0.49 16 16 C -0.11 0.17 4.85 -26.76 -0.13 0.04 16 17 C -0.13 0.22 5.39 -26.76 -0.14 0.07 16 18 N -0.52 0.25 5.99 -5.69 -0.03 0.21 16 19 C 0.03 -0.01 6.47 -81.95 -0.53 -0.54 16 20 C -0.06 0.09 3.08 36.01 0.11 0.20 16 21 O -0.53 0.17 12.88 -35.23 -0.45 -0.29 16 22 Si 0.72 -1.42 30.54 -169.99 -5.19 -6.62 16 23 C -0.20 -0.10 9.27 -39.98 -0.37 -0.47 16 24 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 25 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 26 H 0.08 0.29 6.49 -51.93 -0.34 -0.05 16 27 H 0.39 -1.02 7.73 -40.82 -0.32 -1.33 16 28 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 29 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.07 -0.04 6.43 -51.93 -0.33 -0.37 16 31 H 0.07 0.01 8.14 -51.92 -0.42 -0.41 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.06 -0.04 6.43 -51.93 -0.33 -0.38 16 34 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 36 H 0.06 -0.08 6.43 -51.93 -0.33 -0.41 16 37 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.07 -0.13 6.43 -51.93 -0.33 -0.46 16 40 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 41 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 42 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 43 H 0.42 -1.14 8.19 -40.82 -0.33 -1.47 16 44 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 45 H 0.38 -1.01 8.70 45.56 0.40 -0.62 16 46 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 47 H -0.26 -0.29 7.11 56.52 0.40 0.12 16 48 H 0.15 -0.21 6.17 -52.49 -0.32 -0.53 16 LS Contribution 370.35 15.07 5.58 5.58 Total: 0.00 -6.08 370.35 -10.68 -16.76 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -8.17 Total: -12.33 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -2.21 Total: -0.12 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.31 Total: 0.04 kcal Atomic # 8 Polarization: -2.94 SS G_CDS: -0.38 Total: -3.31 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.19 Total: -6.62 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -6.08 -10.68 -16.76 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.695 kcal (2) G-P(sol) polarization free energy of solvation -6.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.772 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.684 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.762 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds