Wall clock time and date at job start Sun Mar 7 2021 02:06:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52998 * 109.47245 * 2 1 4 4 C 1.52998 * 109.47305 * 120.00814 * 2 1 3 5 5 H 1.09000 * 109.46971 * 299.99461 * 4 2 1 6 6 C 1.52997 * 109.47722 * 59.99808 * 4 2 1 7 7 C 1.52993 * 109.47438 * 180.02562 * 6 4 2 8 8 C 1.53003 * 109.47091 * 299.99888 * 7 6 4 9 9 H 1.09000 * 109.46666 * 300.00126 * 8 7 6 10 10 N 1.46501 * 109.47484 * 180.02562 * 8 7 6 11 11 C 1.34774 * 119.99940 * 84.99520 * 10 8 7 12 12 O 1.21279 * 120.00226 * 0.02562 * 11 10 8 13 13 C 1.50704 * 119.99719 * 180.02562 * 11 10 8 14 14 C 1.50700 * 109.46820 * 180.02562 * 13 11 10 15 15 C 1.34856 * 125.89027 * 275.02405 * 14 13 11 16 16 C 1.40893 * 107.41387 * 179.97438 * 15 14 13 17 17 C 1.34845 * 107.42021 * 0.02562 * 16 15 14 18 18 C 1.50706 * 125.89207 * 179.97438 * 17 16 15 19 19 O 1.42902 * 109.47178 * 120.02126 * 18 17 16 20 20 Si 1.86295 * 109.46867 * 0.02562 * 18 17 16 21 21 N 1.36341 * 125.89080 * 95.00333 * 14 13 11 22 22 C 1.52998 * 109.47245 * 59.99664 * 8 7 6 23 23 C 1.52995 * 109.47279 * 300.00560 * 22 8 7 24 24 H 1.08997 * 109.47349 * 59.99918 * 1 2 3 25 25 H 1.09002 * 109.46849 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.46666 * 299.99539 * 1 2 3 27 27 H 1.09007 * 109.47071 * 240.00440 * 2 1 3 28 28 H 1.09000 * 109.47084 * 180.02562 * 3 2 1 29 29 H 1.09000 * 109.47512 * 300.00360 * 3 2 1 30 30 H 1.09007 * 109.46727 * 60.00230 * 3 2 1 31 31 H 1.09000 * 109.46727 * 300.00253 * 6 4 2 32 32 H 1.09000 * 109.47181 * 59.99782 * 6 4 2 33 33 H 1.09002 * 109.47445 * 180.02562 * 7 6 4 34 34 H 1.09000 * 109.47468 * 59.99522 * 7 6 4 35 35 H 0.97004 * 119.99672 * 265.00128 * 10 8 7 36 36 H 1.08998 * 109.46798 * 60.00514 * 13 11 10 37 37 H 1.08995 * 109.47176 * 300.00044 * 13 11 10 38 38 H 1.07999 * 126.28963 * 359.97438 * 15 14 13 39 39 H 1.07995 * 126.28880 * 179.97438 * 16 15 14 40 40 H 1.09001 * 109.46682 * 240.01968 * 18 17 16 41 41 H 0.96695 * 113.99558 * 300.00154 * 19 18 17 42 42 H 1.48496 * 109.99974 * 180.02562 * 20 18 17 43 43 H 1.48505 * 109.99972 * 301.31802 * 20 18 17 44 44 H 0.97006 * 125.63619 * 0.27697 * 21 14 13 45 45 H 1.09007 * 109.46727 * 60.00230 * 22 8 7 46 46 H 1.08993 * 109.47699 * 179.97438 * 22 8 7 47 47 H 1.09002 * 109.47374 * 179.97438 * 23 22 8 48 48 H 1.08996 * 109.47439 * 299.99461 * 23 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7214 1.2491 5 1 1.6768 -0.2076 2.1392 6 6 1.5301 -2.1639 1.2491 7 6 2.0397 -2.8850 2.4985 8 6 3.5697 -2.8850 2.4990 9 1 3.9333 -3.3989 1.6092 10 7 4.0577 -3.5761 3.6951 11 6 4.1864 -4.9177 3.6928 12 8 3.8986 -5.5528 2.7006 13 6 4.6878 -5.6286 4.9234 14 6 4.7392 -7.1116 4.6608 15 6 3.7111 -7.9741 4.7938 16 6 4.1878 -9.2546 4.4497 17 6 5.4890 -9.1259 4.1203 18 6 6.4050 -10.2411 3.6861 19 8 6.9010 -9.9667 2.3743 20 14 5.4625 -11.8480 3.6699 21 7 5.8331 -7.8127 4.2476 22 6 4.0797 -1.4426 2.4990 23 6 3.5701 -0.7214 1.2496 24 1 -0.3634 0.5138 -0.8899 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8934 -0.5138 -0.8901 28 1 3.1301 1.4424 -0.0005 29 1 1.6767 1.9564 -0.8899 30 1 1.6767 1.9563 0.8901 31 1 0.4401 -2.1639 1.2491 32 1 1.8934 -2.6777 0.3590 33 1 1.6768 -3.9129 2.4982 34 1 1.6761 -2.3711 3.3883 35 1 4.2881 -3.0680 4.4886 36 1 4.0146 -5.4300 5.7573 37 1 5.6868 -5.2686 5.1692 38 1 2.7070 -7.7285 5.1064 39 1 3.6162 -10.1709 4.4506 40 1 7.2405 -10.3167 4.3820 41 1 6.2109 -9.8860 1.7018 42 1 6.3548 -12.9559 3.2440 43 1 4.9143 -12.1289 5.0212 44 1 6.7121 -7.4396 4.0765 45 1 3.7161 -0.9287 3.3889 46 1 5.1697 -1.4425 2.4999 47 1 3.9331 0.3064 1.2499 48 1 3.9337 -1.2352 0.3598 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_14644196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:56 Heat of formation + Delta-G solvation = -53.108052 kcal Electronic energy + Delta-G solvation = -25536.056347 eV Core-core repulsion = 21977.748351 eV Total energy + Delta-G solvation = -3558.307996 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.26025 -40.99932 -39.63448 -37.63796 -36.63381 -34.16304 -32.98682 -31.96328 -31.82452 -30.00765 -28.73518 -28.08265 -25.24828 -23.84705 -23.51037 -21.71875 -21.30566 -21.24767 -20.86546 -20.61554 -18.88471 -18.08304 -17.52836 -16.77747 -16.47442 -16.15945 -16.07999 -15.41917 -15.25649 -15.11127 -14.99671 -14.60285 -14.59560 -14.44167 -14.26030 -14.03667 -13.99909 -13.79852 -13.54480 -13.39827 -13.14160 -12.88406 -12.76553 -12.63179 -12.30254 -12.14578 -12.09662 -11.97360 -11.86632 -11.66966 -11.38156 -11.20196 -10.98260 -10.72428 -10.57669 -9.99164 -9.68380 -8.86083 -4.92203 1.18294 1.33543 1.69139 1.72804 1.97371 1.98379 2.33684 2.54100 3.49991 3.59369 3.62651 3.67869 3.72660 3.87186 3.96275 3.99483 4.02257 4.11180 4.25549 4.27986 4.35060 4.37516 4.45613 4.47763 4.50584 4.59319 4.62001 4.63419 4.75352 4.75503 4.85267 4.92408 4.95655 4.99596 5.04290 5.10017 5.13707 5.16331 5.24087 5.32640 5.34351 5.35347 5.38661 5.47950 5.53429 5.57714 6.08868 6.23367 6.49046 6.57740 6.69824 7.28051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.083 4.083 5 H 0.071 0.929 6 C -0.114 4.114 7 C -0.128 4.128 8 C 0.146 3.854 9 H 0.087 0.913 10 N -0.731 5.731 11 C 0.511 3.489 12 O -0.522 6.522 13 C -0.073 4.073 14 C 0.036 3.964 15 C -0.173 4.173 16 C -0.188 4.188 17 C -0.011 4.011 18 C -0.049 4.049 19 O -0.547 6.547 20 Si 0.720 3.280 21 N -0.535 5.535 22 C -0.126 4.126 23 C -0.113 4.113 24 H 0.053 0.947 25 H 0.058 0.942 26 H 0.054 0.946 27 H 0.069 0.931 28 H 0.057 0.943 29 H 0.053 0.947 30 H 0.054 0.946 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.068 0.932 34 H 0.063 0.937 35 H 0.399 0.601 36 H 0.116 0.884 37 H 0.098 0.902 38 H 0.136 0.864 39 H 0.141 0.859 40 H 0.109 0.891 41 H 0.383 0.617 42 H -0.256 1.256 43 H -0.255 1.255 44 H 0.412 0.588 45 H 0.068 0.932 46 H 0.067 0.933 47 H 0.071 0.929 48 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.889 4.040 1.583 4.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.152 4.152 7 C -0.167 4.167 8 C 0.042 3.958 9 H 0.105 0.895 10 N -0.383 5.383 11 C 0.297 3.703 12 O -0.396 6.396 13 C -0.114 4.114 14 C -0.077 4.077 15 C -0.198 4.198 16 C -0.213 4.213 17 C -0.124 4.124 18 C -0.160 4.160 19 O -0.353 6.353 20 Si 0.620 3.380 21 N -0.130 5.130 22 C -0.164 4.164 23 C -0.151 4.151 24 H 0.072 0.928 25 H 0.077 0.923 26 H 0.073 0.927 27 H 0.088 0.912 28 H 0.076 0.924 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.088 0.912 32 H 0.083 0.917 33 H 0.086 0.914 34 H 0.081 0.919 35 H 0.233 0.767 36 H 0.134 0.866 37 H 0.116 0.884 38 H 0.154 0.846 39 H 0.158 0.842 40 H 0.127 0.873 41 H 0.230 0.770 42 H -0.181 1.181 43 H -0.179 1.179 44 H 0.249 0.751 45 H 0.086 0.914 46 H 0.086 0.914 47 H 0.090 0.910 48 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -0.439 2.781 1.461 3.172 hybrid contribution 0.853 1.066 0.704 1.536 sum 0.414 3.846 2.165 4.433 Atomic orbital electron populations 1.21908 0.95204 1.01933 1.01759 1.21144 0.95824 0.96136 0.98021 1.21910 1.01131 0.95946 1.01791 1.21248 0.94946 0.95736 0.98236 0.91096 1.21612 1.00851 0.94876 0.97845 1.21908 0.94886 1.01258 0.98599 1.21005 0.93998 0.92333 0.88471 0.89517 1.46116 1.68212 1.06929 1.17019 1.20575 0.77921 0.82117 0.89706 1.90761 1.48545 1.65675 1.34637 1.20145 1.04012 0.89762 0.97439 1.19481 0.88113 0.92309 1.07812 1.20580 0.98268 0.92386 1.08549 1.20643 0.93466 0.98410 1.08766 1.20834 0.96194 0.85193 1.10206 1.24837 1.01019 1.03901 0.86234 1.86461 1.37415 1.94620 1.16774 0.93943 0.84381 0.73671 0.86012 1.41783 1.11415 1.07037 1.52743 1.21806 1.00830 0.94296 0.99455 1.21601 0.95422 1.00656 0.97424 0.92761 0.92324 0.92735 0.91214 0.92414 0.92757 0.92730 0.91235 0.91716 0.91369 0.91856 0.76689 0.86573 0.88369 0.84629 0.84152 0.87345 0.76955 1.18086 1.17915 0.75133 0.91359 0.91382 0.91026 0.91631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.13 8.84 37.16 0.33 0.46 16 2 C -0.09 0.09 2.51 -90.62 -0.23 -0.13 16 3 C -0.15 0.17 8.84 37.16 0.33 0.50 16 4 C -0.08 0.11 1.77 -90.62 -0.16 -0.05 16 5 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 6 C -0.11 0.07 4.85 -26.74 -0.13 -0.06 16 7 C -0.13 0.02 5.49 -26.73 -0.15 -0.13 16 8 C 0.15 -0.07 2.45 -67.93 -0.17 -0.24 16 9 H 0.09 0.17 7.58 -51.93 -0.39 -0.22 16 10 N -0.73 1.01 5.08 -53.80 -0.27 0.74 16 11 C 0.51 0.52 7.79 -10.98 -0.09 0.44 16 12 O -0.52 -2.90 15.70 5.56 0.09 -2.82 16 13 C -0.07 0.10 6.24 -29.03 -0.18 -0.08 16 14 C 0.04 0.06 5.66 -81.79 -0.46 -0.40 16 15 C -0.17 -0.45 10.77 -39.78 -0.43 -0.88 16 16 C -0.19 -0.43 9.37 -39.78 -0.37 -0.80 16 17 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 18 C -0.05 -0.04 3.08 36.01 0.11 0.07 16 19 O -0.55 -0.77 12.88 -35.23 -0.45 -1.22 16 20 Si 0.72 -0.15 30.58 -169.99 -5.20 -5.35 16 21 N -0.54 -0.84 6.07 -5.44 -0.03 -0.87 16 22 C -0.13 0.26 5.39 -26.73 -0.14 0.12 16 23 C -0.11 0.19 4.85 -26.73 -0.13 0.06 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.06 -0.05 6.43 -51.93 -0.33 -0.38 16 26 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 27 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 28 H 0.06 -0.08 6.43 -51.93 -0.33 -0.41 16 29 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.07 -0.04 6.43 -51.93 -0.33 -0.37 16 32 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 34 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 35 H 0.40 -1.66 8.60 -40.82 -0.35 -2.01 16 36 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 37 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 38 H 0.14 0.20 8.06 -52.49 -0.42 -0.22 16 39 H 0.14 0.08 6.22 -52.49 -0.33 -0.25 16 40 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 41 H 0.38 -0.63 8.70 45.56 0.40 -0.24 16 42 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 43 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 44 H 0.41 0.00 8.96 -40.82 -0.37 -0.37 16 45 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 46 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 47 H 0.07 -0.14 6.43 -51.93 -0.33 -0.47 16 48 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 374.73 15.07 5.65 5.65 Total: 0.00 -7.52 374.73 -10.95 -18.47 By element: Atomic # 1 Polarization: -4.58 SS G_CDS: -8.33 Total: -12.91 kcal Atomic # 6 Polarization: 0.71 SS G_CDS: -2.40 Total: -1.69 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.31 Total: -0.13 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.37 Total: -4.04 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.20 Total: -5.35 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -7.52 -10.95 -18.47 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_14644196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.636 kcal (2) G-P(sol) polarization free energy of solvation -7.519 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.155 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.953 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.472 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.108 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds