Wall clock time and date at job start Sun Mar 7 2021 02:06:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.47233 * 2 1 4 4 C 1.52997 * 109.46817 * 240.00194 * 2 1 3 5 5 H 1.09002 * 109.47153 * 60.00231 * 4 2 1 6 6 C 1.52999 * 109.47317 * 179.97438 * 4 2 1 7 7 C 1.53002 * 109.47628 * 180.02562 * 6 4 2 8 8 C 1.53000 * 109.46806 * 300.00074 * 7 6 4 9 9 H 1.08992 * 109.47399 * 299.99952 * 8 7 6 10 10 N 1.46499 * 109.46840 * 179.97438 * 8 7 6 11 11 C 1.34781 * 119.99874 * 85.00543 * 10 8 7 12 12 O 1.21278 * 120.00033 * 359.97438 * 11 10 8 13 13 C 1.50703 * 120.00101 * 179.97438 * 11 10 8 14 14 C 1.53537 * 109.82067 * 279.13760 * 13 11 10 15 15 C 1.53040 * 108.56265 * 179.57517 * 14 13 11 16 16 C 1.50202 * 110.36494 * 49.46709 * 15 14 13 17 17 C 1.50691 * 118.54717 * 159.96663 * 16 15 14 18 18 O 1.42903 * 109.47321 * 70.02610 * 17 16 15 19 19 Si 1.86306 * 109.47404 * 190.02141 * 17 16 15 20 20 C 1.31117 * 122.90366 * 339.99353 * 16 15 14 21 21 N 1.38921 * 121.85299 * 0.40401 * 20 16 15 22 22 C 1.53002 * 109.46911 * 59.99917 * 8 7 6 23 23 C 1.52992 * 109.47482 * 300.00014 * 4 2 1 24 24 H 1.09000 * 109.46986 * 299.99797 * 1 2 3 25 25 H 1.09002 * 109.47075 * 59.99068 * 1 2 3 26 26 H 1.08996 * 109.47407 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47070 * 120.00374 * 2 1 3 28 28 H 1.09004 * 109.46724 * 60.00652 * 3 2 1 29 29 H 1.09001 * 109.47194 * 179.97438 * 3 2 1 30 30 H 1.08992 * 109.47399 * 300.00166 * 3 2 1 31 31 H 1.09001 * 109.47362 * 300.00732 * 6 4 2 32 32 H 1.09002 * 109.46716 * 60.00091 * 6 4 2 33 33 H 1.09001 * 109.47142 * 180.02562 * 7 6 4 34 34 H 1.09002 * 109.46838 * 59.99718 * 7 6 4 35 35 H 0.97002 * 120.00410 * 264.99761 * 10 8 7 36 36 H 1.09001 * 109.80977 * 39.99356 * 13 11 10 37 37 H 1.09009 * 109.61952 * 299.23250 * 14 13 11 38 38 H 1.08997 * 109.62544 * 59.78488 * 14 13 11 39 39 H 1.08996 * 109.26747 * 289.21418 * 15 14 13 40 40 H 1.09003 * 109.20261 * 169.67629 * 15 14 13 41 41 H 1.08999 * 109.47613 * 310.02239 * 17 16 15 42 42 H 0.96693 * 114.00444 * 179.97438 * 18 17 16 43 43 H 1.48500 * 110.00160 * 178.68257 * 19 17 16 44 44 H 1.48504 * 109.99917 * 300.00421 * 19 17 16 45 45 H 1.08005 * 119.07462 * 180.42456 * 20 16 15 46 46 H 0.96998 * 120.56116 * 166.70416 * 21 20 16 47 47 H 1.09004 * 109.46930 * 179.97438 * 22 8 7 48 48 H 1.09002 * 109.47067 * 59.99825 * 22 8 7 49 49 H 1.09002 * 109.47103 * 300.00247 * 23 4 2 50 50 H 1.09001 * 109.47066 * 60.00169 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 1 1.6766 -0.2073 -2.1392 6 6 3.5699 -0.7207 -1.2497 7 6 4.0799 -1.4414 -2.4993 8 6 3.5704 -2.8840 -2.4996 9 1 3.9341 -3.3980 -1.6100 10 7 4.0582 -3.5739 -3.6964 11 6 5.2804 -4.1421 -3.6956 12 8 5.9765 -4.0819 -2.7043 13 6 5.7820 -4.8523 -4.9265 14 6 5.1917 -6.2683 -4.9875 15 6 5.7104 -6.9583 -6.2512 16 6 7.2024 -6.8159 -6.3497 17 6 7.9609 -7.7755 -7.2298 18 8 7.6662 -7.4992 -8.6006 19 14 9.7896 -7.5754 -6.9354 20 6 7.8740 -5.8938 -5.7033 21 7 7.2456 -4.9799 -4.8669 22 6 2.0404 -2.8845 -2.4993 23 6 1.5300 -2.1636 -1.2494 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5140 -0.8899 26 1 -0.3634 -1.0276 0.0005 27 1 1.8934 -0.5139 0.8900 28 1 1.6768 1.9562 0.8901 29 1 3.1301 1.4425 0.0005 30 1 1.6768 1.9563 -0.8899 31 1 3.9330 0.3071 -1.2498 32 1 3.9336 -1.2344 -0.3597 33 1 5.1699 -1.4414 -2.4993 34 1 3.7162 -0.9274 -3.3890 35 1 3.5016 -3.6218 -4.4894 36 1 5.4956 -4.2938 -5.8177 37 1 5.5037 -6.8331 -4.1089 38 1 4.1038 -6.2103 -5.0213 39 1 5.2459 -6.5031 -7.1259 40 1 5.4506 -8.0163 -6.2143 41 1 7.6645 -8.7974 -6.9933 42 1 8.1214 -8.0799 -9.2256 43 1 10.5475 -8.5383 -7.7742 44 1 10.2064 -6.1862 -7.2543 45 1 8.9460 -5.8433 -5.8247 46 1 7.7635 -4.4349 -4.2541 47 1 1.6774 -3.9123 -2.4999 48 1 1.6767 -2.3705 -3.3890 49 1 1.8933 -2.6775 -0.3594 50 1 0.4400 -2.1636 -1.2494 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_15413834.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:59 Heat of formation + Delta-G solvation = -73.590699 kcal Electronic energy + Delta-G solvation = -26393.318055 eV Core-core repulsion = 22806.810386 eV Total energy + Delta-G solvation = -3586.507669 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.209 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.51775 -40.28046 -39.20249 -37.46561 -36.66327 -34.28970 -33.26728 -32.91003 -31.99171 -29.68441 -28.09830 -27.31429 -25.35177 -24.17312 -23.54507 -23.29679 -21.57647 -21.25877 -20.67941 -19.07109 -19.04003 -18.33216 -17.51326 -17.44647 -16.62768 -16.12253 -15.84433 -15.42132 -15.40754 -15.25943 -15.09504 -14.76156 -14.60255 -14.46469 -14.32325 -14.29336 -13.94207 -13.74199 -13.59289 -13.45012 -13.16061 -12.87309 -12.83977 -12.72493 -12.36316 -12.34672 -12.17341 -12.11962 -11.72923 -11.68378 -11.63523 -11.40250 -11.22734 -11.20377 -11.01379 -10.68787 -10.21573 -10.08141 -8.41411 -4.88113 1.35892 1.43719 1.53805 1.64718 1.89499 2.02331 2.64869 3.45604 3.57740 3.59956 3.64064 3.71287 3.78495 3.92535 3.94277 4.02730 4.07259 4.23043 4.23398 4.25451 4.31731 4.41692 4.44330 4.46991 4.57066 4.58211 4.60694 4.65541 4.72703 4.74109 4.77050 4.90748 4.94033 4.96434 4.99769 5.01643 5.07206 5.11072 5.13033 5.20963 5.23996 5.30079 5.30913 5.32771 5.44361 5.47669 5.54823 5.59536 6.27344 6.43910 6.62580 6.87188 7.12452 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.114 4.114 7 C -0.128 4.128 8 C 0.146 3.854 9 H 0.089 0.911 10 N -0.723 5.723 11 C 0.513 3.487 12 O -0.529 6.529 13 C 0.135 3.865 14 C -0.126 4.126 15 C -0.052 4.052 16 C -0.234 4.234 17 C -0.050 4.050 18 O -0.542 6.542 19 Si 0.667 3.333 20 C 0.142 3.858 21 N -0.730 5.730 22 C -0.126 4.126 23 C -0.113 4.113 24 H 0.053 0.947 25 H 0.054 0.946 26 H 0.057 0.943 27 H 0.070 0.930 28 H 0.053 0.947 29 H 0.057 0.943 30 H 0.054 0.946 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.066 0.934 34 H 0.063 0.937 35 H 0.402 0.598 36 H 0.089 0.911 37 H 0.078 0.922 38 H 0.078 0.922 39 H 0.067 0.933 40 H 0.073 0.927 41 H 0.066 0.934 42 H 0.373 0.627 43 H -0.265 1.265 44 H -0.259 1.259 45 H 0.134 0.866 46 H 0.409 0.591 47 H 0.069 0.931 48 H 0.068 0.932 49 H 0.066 0.934 50 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.047 -0.217 0.402 3.081 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.152 4.152 7 C -0.167 4.167 8 C 0.041 3.959 9 H 0.107 0.893 10 N -0.375 5.375 11 C 0.299 3.701 12 O -0.405 6.405 13 C 0.026 3.974 14 C -0.165 4.165 15 C -0.090 4.090 16 C -0.244 4.244 17 C -0.161 4.161 18 O -0.348 6.348 19 Si 0.570 3.430 20 C 0.021 3.979 21 N -0.363 5.363 22 C -0.164 4.164 23 C -0.151 4.151 24 H 0.072 0.928 25 H 0.073 0.927 26 H 0.076 0.924 27 H 0.088 0.912 28 H 0.073 0.927 29 H 0.076 0.924 30 H 0.073 0.927 31 H 0.088 0.912 32 H 0.083 0.917 33 H 0.085 0.915 34 H 0.082 0.918 35 H 0.236 0.764 36 H 0.107 0.893 37 H 0.097 0.903 38 H 0.097 0.903 39 H 0.086 0.914 40 H 0.092 0.908 41 H 0.084 0.916 42 H 0.220 0.780 43 H -0.190 1.190 44 H -0.185 1.185 45 H 0.151 0.849 46 H 0.246 0.754 47 H 0.088 0.912 48 H 0.087 0.913 49 H 0.084 0.916 50 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -2.261 0.489 1.032 2.533 hybrid contribution -0.313 -0.118 -1.442 1.481 sum -2.574 0.371 -0.410 2.633 Atomic orbital electron populations 1.21909 0.95222 1.01848 1.01806 1.21143 0.95750 0.96224 0.97998 1.21908 1.01231 0.95900 1.01777 1.21251 0.95180 0.95495 0.98278 0.91073 1.21613 0.95058 1.00743 0.97751 1.21913 1.01198 0.94827 0.98749 1.21052 0.93833 0.92699 0.88271 0.89295 1.46059 1.17685 1.56479 1.17242 1.20597 0.81749 0.78286 0.89510 1.90731 1.55988 1.59164 1.34617 1.21004 0.83313 0.97349 0.95747 1.21881 1.00345 0.93928 1.00323 1.19955 0.91928 1.00775 0.96297 1.19913 0.96085 1.01382 1.06985 1.24558 1.09214 0.99640 0.82688 1.86620 1.71002 1.61605 1.15597 0.95340 0.75390 0.80358 0.91916 1.20398 0.96430 0.88912 0.92138 1.44238 1.04184 1.43692 1.44215 1.21823 0.93704 1.01378 0.99526 1.21609 1.00916 0.95168 0.97392 0.92751 0.92723 0.92380 0.91197 0.92748 0.92358 0.92731 0.91221 0.91676 0.91486 0.91782 0.76420 0.89329 0.90332 0.90313 0.91418 0.90804 0.91568 0.78032 1.19020 1.18465 0.84912 0.75374 0.91186 0.91294 0.91575 0.90942 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 8.84 37.16 0.33 0.52 16 2 C -0.09 0.11 2.51 -90.62 -0.23 -0.12 16 3 C -0.15 0.14 8.84 37.16 0.33 0.47 16 4 C -0.08 0.13 1.77 -90.63 -0.16 -0.03 16 5 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 6 C -0.11 0.09 4.85 -26.73 -0.13 -0.04 16 7 C -0.13 0.05 5.49 -26.73 -0.15 -0.10 16 8 C 0.15 -0.11 2.45 -67.93 -0.17 -0.28 16 9 H 0.09 0.13 7.58 -51.93 -0.39 -0.27 16 10 N -0.72 0.97 5.08 -53.81 -0.27 0.69 16 11 C 0.51 0.53 7.05 -10.98 -0.08 0.45 16 12 O -0.53 -2.49 15.75 5.56 0.09 -2.40 16 13 C 0.14 -0.01 3.36 -68.51 -0.23 -0.24 16 14 C -0.13 0.08 5.48 -26.43 -0.14 -0.07 16 15 C -0.05 -0.02 5.85 -28.10 -0.16 -0.19 16 16 C -0.23 -0.32 5.40 -101.34 -0.55 -0.87 16 17 C -0.05 -0.04 2.80 36.00 0.10 0.06 16 18 O -0.54 -1.10 12.86 -35.23 -0.45 -1.55 16 19 Si 0.67 -0.01 29.92 -169.99 -5.09 -5.10 16 20 C 0.14 0.16 9.61 -16.08 -0.15 0.00 16 21 N -0.73 -0.75 5.47 -55.34 -0.30 -1.05 16 22 C -0.13 0.29 5.39 -26.71 -0.14 0.15 16 23 C -0.11 0.22 4.86 -26.71 -0.13 0.09 16 24 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 25 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 26 H 0.06 -0.09 6.43 -51.93 -0.33 -0.42 16 27 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.06 -0.05 6.43 -51.93 -0.33 -0.39 16 30 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 -0.05 6.43 -51.93 -0.33 -0.39 16 32 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 34 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.40 -1.51 8.60 -40.82 -0.35 -1.86 16 36 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.08 0.05 8.14 -51.92 -0.42 -0.37 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 40 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 42 H 0.37 -0.62 8.74 45.56 0.40 -0.22 16 43 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 44 H -0.26 -0.74 6.88 56.52 0.39 -0.35 16 45 H 0.13 0.01 4.34 -52.48 -0.23 -0.22 16 46 H 0.41 0.42 8.10 -40.82 -0.33 0.09 16 47 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 48 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 49 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 50 H 0.07 -0.16 6.43 -51.93 -0.33 -0.49 16 LS Contribution 377.07 15.07 5.68 5.68 Total: 0.00 -6.08 377.07 -11.06 -17.15 By element: Atomic # 1 Polarization: -4.19 SS G_CDS: -9.05 Total: -13.24 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -1.67 Total: -0.18 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -0.58 Total: -0.36 kcal Atomic # 8 Polarization: -3.59 SS G_CDS: -0.37 Total: -3.95 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.09 Total: -5.10 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -6.08 -11.06 -17.15 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_15413834.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.445 kcal (2) G-P(sol) polarization free energy of solvation -6.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.529 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.062 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.146 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds