Wall clock time and date at job start Sun Mar 7 2021 02:07:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52995 * 109.47266 * 2 1 4 4 C 1.53005 * 109.46922 * 120.00048 * 2 1 3 5 5 H 1.08996 * 109.46865 * 299.99966 * 4 2 1 6 6 C 1.52995 * 109.47190 * 59.99905 * 4 2 1 7 7 C 1.52995 * 109.47251 * 179.97438 * 6 4 2 8 8 C 1.53004 * 109.46932 * 300.00139 * 7 6 4 9 9 H 1.08996 * 109.47323 * 299.99605 * 8 7 6 10 10 N 1.46504 * 109.46980 * 179.97438 * 8 7 6 11 11 C 1.34781 * 119.99384 * 85.00283 * 10 8 7 12 12 O 1.21272 * 120.00505 * 359.97438 * 11 10 8 13 13 C 1.50706 * 119.99758 * 179.97438 * 11 10 8 14 14 C 1.53037 * 109.32949 * 179.13428 * 13 11 10 15 15 C 1.53549 * 108.55866 * 169.82861 * 14 13 11 16 16 N 1.47024 * 107.65883 * 299.05196 * 15 14 13 17 17 C 1.38921 * 118.93010 * 43.43642 * 16 15 14 18 18 C 1.31116 * 121.85125 * 347.17977 * 17 16 15 19 19 C 1.50694 * 118.54437 * 180.17014 * 18 17 16 20 20 O 1.42901 * 109.47118 * 249.72538 * 19 18 17 21 21 Si 1.86298 * 109.47775 * 9.72783 * 19 18 17 22 22 C 1.52995 * 109.47266 * 59.99871 * 8 7 6 23 23 C 1.52995 * 109.47251 * 299.99934 * 22 8 7 24 24 H 1.09001 * 109.47061 * 299.99873 * 1 2 3 25 25 H 1.08999 * 109.47155 * 59.99904 * 1 2 3 26 26 H 1.09001 * 109.47239 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.46654 * 239.99780 * 2 1 3 28 28 H 1.09004 * 109.47218 * 59.99356 * 3 2 1 29 29 H 1.08995 * 109.47636 * 179.97438 * 3 2 1 30 30 H 1.09009 * 109.47026 * 300.00053 * 3 2 1 31 31 H 1.09002 * 109.47303 * 299.99664 * 6 4 2 32 32 H 1.09001 * 109.46976 * 59.99809 * 6 4 2 33 33 H 1.09003 * 109.47766 * 179.97438 * 7 6 4 34 34 H 1.09002 * 109.47166 * 59.99476 * 7 6 4 35 35 H 0.96992 * 120.00379 * 264.99745 * 10 8 7 36 36 H 1.09003 * 109.18499 * 59.56486 * 13 11 10 37 37 H 1.08993 * 109.62291 * 289.55367 * 14 13 11 38 38 H 1.08999 * 109.61771 * 50.11070 * 14 13 11 39 39 H 1.08998 * 109.82054 * 58.59150 * 15 14 13 40 40 H 1.09002 * 109.81611 * 179.51163 * 15 14 13 41 41 H 0.97003 * 120.55920 * 223.64505 * 16 15 14 42 42 H 1.08007 * 119.07285 * 166.94088 * 17 16 15 43 43 H 1.09004 * 109.47407 * 129.72895 * 19 18 17 44 44 H 0.96708 * 114.00246 * 180.02562 * 20 19 18 45 45 H 1.48506 * 109.99834 * 300.00486 * 21 19 18 46 46 H 1.48502 * 110.00011 * 61.31751 * 21 19 18 47 47 H 1.09002 * 109.47463 * 60.00276 * 22 8 7 48 48 H 1.08998 * 109.47483 * 179.97438 * 22 8 7 49 49 H 1.09003 * 109.47766 * 180.02562 * 23 22 8 50 50 H 1.09001 * 109.47246 * 299.99976 * 23 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 1.2493 5 1 1.6766 -0.2074 2.1392 6 6 1.5300 -2.1637 1.2493 7 6 2.0404 -2.8852 2.4982 8 6 3.5705 -2.8852 2.4975 9 1 3.9335 -3.3989 1.6074 10 7 4.0593 -3.5755 3.6937 11 6 4.1880 -4.9171 3.6921 12 8 3.8988 -5.5529 2.7007 13 6 4.6914 -5.6273 4.9224 14 6 4.7209 -7.1348 4.6607 15 6 5.4687 -7.8167 5.8154 16 7 6.8385 -7.2830 5.8365 17 6 7.0301 -5.9170 5.6715 18 6 6.0684 -5.1286 5.2557 19 6 6.3595 -3.6584 5.0994 20 8 5.6573 -2.9243 6.1044 21 14 8.1902 -3.3648 5.2812 22 6 4.0805 -1.4427 2.4975 23 6 3.5700 -0.7213 1.2487 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0277 -0.0005 27 1 1.8933 -0.5139 -0.8900 28 1 1.6766 1.9563 0.8900 29 1 3.1300 1.4425 0.0005 30 1 1.6767 1.9563 -0.8901 31 1 0.4400 -2.1637 1.2493 32 1 1.8933 -2.6775 0.3593 33 1 1.6767 -3.9127 2.4985 34 1 1.6775 -2.3714 3.3884 35 1 4.2903 -3.0670 4.4867 36 1 4.0206 -5.4188 5.7559 37 1 3.7016 -7.5172 4.6082 38 1 5.2379 -7.3332 3.7219 39 1 4.9713 -7.5956 6.7596 40 1 5.4944 -8.8944 5.6537 41 1 7.5967 -7.8752 5.9605 42 1 7.9973 -5.4918 5.8957 43 1 6.0345 -3.3264 4.1133 44 1 5.7981 -1.9684 6.0640 45 1 8.6458 -3.8132 6.6216 46 1 8.9297 -4.0974 4.2221 47 1 3.7176 -0.9290 3.3878 48 1 5.1705 -1.4427 2.4975 49 1 3.9337 0.3063 1.2483 50 1 3.9330 -1.2350 0.3584 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_15608500.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:07:03 Heat of formation + Delta-G solvation = -64.828670 kcal Electronic energy + Delta-G solvation = -27654.247561 eV Core-core repulsion = 24068.119843 eV Total energy + Delta-G solvation = -3586.127719 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.209 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.60442 -40.20764 -38.97481 -37.79305 -36.49240 -34.18411 -33.25965 -32.85878 -31.90286 -29.49182 -28.04745 -27.26806 -25.85982 -23.77276 -23.43746 -23.12082 -21.45950 -21.14627 -20.61786 -19.18408 -18.78005 -18.50767 -17.71110 -17.41249 -16.67122 -16.12736 -15.64826 -15.48033 -15.21028 -15.16128 -15.01759 -14.79097 -14.72327 -14.40742 -14.37690 -14.14437 -13.74588 -13.67588 -13.55048 -13.34982 -13.10367 -12.92717 -12.67929 -12.61600 -12.26008 -12.21017 -12.08836 -12.03924 -11.90554 -11.70498 -11.60737 -11.44727 -11.32753 -11.13126 -10.91030 -10.55027 -10.32267 -9.66887 -8.54537 -5.00209 1.15972 1.27208 1.61193 1.87493 1.95679 2.38671 2.48314 3.42450 3.62871 3.68040 3.69635 3.71577 3.79424 3.99981 4.03186 4.14097 4.15967 4.26248 4.32106 4.33861 4.36794 4.41279 4.47238 4.53746 4.56945 4.60328 4.65096 4.67016 4.72858 4.78911 4.81455 4.83502 4.97118 4.99652 5.04969 5.10017 5.14568 5.16568 5.19959 5.22021 5.29026 5.30651 5.36582 5.38127 5.40803 5.52918 5.61200 5.71518 6.19841 6.57273 6.71373 6.72290 7.45708 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.150 4.150 4 C -0.083 4.083 5 H 0.071 0.929 6 C -0.114 4.114 7 C -0.128 4.128 8 C 0.141 3.859 9 H 0.086 0.914 10 N -0.727 5.727 11 C 0.527 3.473 12 O -0.541 6.541 13 C -0.039 4.039 14 C -0.121 4.121 15 C 0.120 3.880 16 N -0.748 5.748 17 C 0.149 3.851 18 C -0.233 4.233 19 C -0.068 4.068 20 O -0.549 6.549 21 Si 0.668 3.332 22 C -0.127 4.127 23 C -0.113 4.113 24 H 0.054 0.946 25 H 0.053 0.947 26 H 0.057 0.943 27 H 0.069 0.931 28 H 0.054 0.946 29 H 0.057 0.943 30 H 0.053 0.947 31 H 0.068 0.932 32 H 0.063 0.937 33 H 0.066 0.934 34 H 0.063 0.937 35 H 0.407 0.593 36 H 0.099 0.901 37 H 0.082 0.918 38 H 0.080 0.920 39 H 0.063 0.937 40 H 0.084 0.916 41 H 0.403 0.597 42 H 0.125 0.875 43 H 0.080 0.920 44 H 0.377 0.623 45 H -0.252 1.252 46 H -0.257 1.257 47 H 0.069 0.931 48 H 0.069 0.931 49 H 0.072 0.928 50 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.598 3.692 1.741 4.383 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.101 4.101 5 H 0.089 0.911 6 C -0.152 4.152 7 C -0.167 4.167 8 C 0.037 3.963 9 H 0.104 0.896 10 N -0.383 5.383 11 C 0.313 3.687 12 O -0.418 6.418 13 C -0.060 4.060 14 C -0.160 4.160 15 C -0.005 4.005 16 N -0.377 5.377 17 C 0.027 3.973 18 C -0.244 4.244 19 C -0.180 4.180 20 O -0.354 6.354 21 Si 0.571 3.429 22 C -0.165 4.165 23 C -0.150 4.150 24 H 0.073 0.927 25 H 0.072 0.928 26 H 0.076 0.924 27 H 0.087 0.913 28 H 0.073 0.927 29 H 0.076 0.924 30 H 0.072 0.928 31 H 0.086 0.914 32 H 0.082 0.918 33 H 0.084 0.916 34 H 0.081 0.919 35 H 0.247 0.753 36 H 0.116 0.884 37 H 0.101 0.899 38 H 0.099 0.901 39 H 0.082 0.918 40 H 0.103 0.897 41 H 0.237 0.763 42 H 0.142 0.858 43 H 0.098 0.902 44 H 0.224 0.776 45 H -0.178 1.178 46 H -0.182 1.182 47 H 0.087 0.913 48 H 0.087 0.913 49 H 0.090 0.910 50 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 1.846 2.228 1.353 3.194 hybrid contribution -0.016 -0.302 0.389 0.493 sum 1.830 1.925 1.741 3.176 Atomic orbital electron populations 1.21909 0.95280 1.01900 1.01725 1.21144 0.95766 0.96149 0.98051 1.21908 1.01159 0.95925 1.01759 1.21245 0.95037 0.95681 0.98185 0.91065 1.21611 1.00750 0.94936 0.97860 1.21909 0.95088 1.01135 0.98542 1.21025 0.93951 0.92465 0.88887 0.89574 1.46593 1.67125 1.07307 1.17297 1.20485 0.76637 0.82289 0.89248 1.90690 1.50078 1.66058 1.34962 1.19704 0.94959 0.95203 0.96132 1.21749 1.01871 0.93067 0.99281 1.21674 0.82262 0.98237 0.98279 1.44549 1.08046 1.04899 1.80243 1.20261 0.97439 0.84795 0.94781 1.19602 0.96254 0.92953 1.15595 1.24798 1.08189 0.90952 0.94052 1.86524 1.72327 1.22515 1.54082 0.95431 0.75801 0.91374 0.80317 1.21819 1.00852 0.94322 0.99459 1.21598 0.95340 1.00648 0.97464 0.92732 0.92808 0.92370 0.91255 0.92724 0.92359 0.92813 0.91350 0.91781 0.91556 0.91866 0.75278 0.88363 0.89933 0.90107 0.91842 0.89742 0.76286 0.85847 0.90236 0.77565 1.17779 1.18163 0.91267 0.91252 0.90971 0.91663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.09 8.84 37.16 0.33 0.42 16 2 C -0.09 0.08 2.51 -90.62 -0.23 -0.15 16 3 C -0.15 0.17 8.84 37.15 0.33 0.50 16 4 C -0.08 0.09 1.78 -90.62 -0.16 -0.07 16 5 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 6 C -0.11 0.00 4.85 -26.74 -0.13 -0.13 16 7 C -0.13 -0.11 5.49 -26.73 -0.15 -0.25 16 8 C 0.14 0.09 2.45 -67.93 -0.17 -0.08 16 9 H 0.09 0.24 7.58 -51.93 -0.39 -0.15 16 10 N -0.73 -0.70 3.38 -53.80 -0.18 -0.88 16 11 C 0.53 1.91 6.78 -10.98 -0.07 1.83 16 12 O -0.54 -3.84 15.46 5.56 0.09 -3.75 16 13 C -0.04 -0.09 2.74 -93.14 -0.26 -0.34 16 14 C -0.12 -0.21 4.91 -26.43 -0.13 -0.34 16 15 C 0.12 -0.02 7.16 -3.47 -0.02 -0.05 16 16 N -0.75 -0.28 5.83 -60.68 -0.35 -0.64 16 17 C 0.15 0.26 9.61 -16.08 -0.15 0.10 16 18 C -0.23 -0.44 5.07 -101.34 -0.51 -0.95 16 19 C -0.07 0.03 1.68 36.00 0.06 0.09 16 20 O -0.55 0.82 11.37 -35.23 -0.40 0.42 16 21 Si 0.67 -0.75 29.91 -169.99 -5.08 -5.83 16 22 C -0.13 0.23 5.39 -26.74 -0.14 0.09 16 23 C -0.11 0.18 4.85 -26.73 -0.13 0.05 16 24 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 25 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 26 H 0.06 -0.03 6.43 -51.93 -0.33 -0.36 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 28 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.06 -0.09 6.43 -51.93 -0.33 -0.42 16 30 H 0.05 -0.04 8.14 -51.92 -0.42 -0.47 16 31 H 0.07 0.00 6.43 -51.93 -0.33 -0.33 16 32 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 33 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 34 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 35 H 0.41 -0.25 5.22 -40.82 -0.21 -0.47 16 36 H 0.10 0.18 8.14 -51.93 -0.42 -0.24 16 37 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 38 H 0.08 0.30 7.75 -51.93 -0.40 -0.11 16 39 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.40 -0.63 8.96 -40.82 -0.37 -1.00 16 42 H 0.12 0.15 4.34 -52.48 -0.23 -0.07 16 43 H 0.08 -0.06 5.34 -51.93 -0.28 -0.34 16 44 H 0.38 -2.31 8.74 45.56 0.40 -1.91 16 45 H -0.25 -0.40 6.89 56.52 0.39 -0.02 16 46 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 47 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 48 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 49 H 0.07 -0.16 6.43 -51.93 -0.33 -0.49 16 50 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 LS Contribution 366.83 15.07 5.53 5.53 Total: 0.00 -6.49 366.83 -10.74 -17.23 By element: Atomic # 1 Polarization: -3.99 SS G_CDS: -8.79 Total: -12.78 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -1.54 Total: 0.71 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.54 Total: -1.52 kcal Atomic # 8 Polarization: -3.02 SS G_CDS: -0.31 Total: -3.33 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.08 Total: -5.83 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -6.49 -10.74 -17.23 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_15608500.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.604 kcal (2) G-P(sol) polarization free energy of solvation -6.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.738 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.829 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds