Wall clock time and date at job start Sun Mar 7 2021 02:07:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52990 * 109.47150 * 2 1 4 4 C 1.53000 * 109.46927 * 120.00005 * 2 1 3 5 5 H 1.09007 * 109.47309 * 299.99976 * 4 2 1 6 6 C 1.53003 * 109.47186 * 59.99830 * 4 2 1 7 7 C 1.53000 * 109.47186 * 180.02562 * 6 4 2 8 8 C 1.53003 * 109.47249 * 300.00315 * 7 6 4 9 9 H 1.09007 * 109.46826 * 300.00126 * 8 7 6 10 10 N 1.46503 * 109.47437 * 180.02562 * 8 7 6 11 11 C 1.34775 * 119.99923 * 84.99566 * 10 8 7 12 12 O 1.21276 * 120.00280 * 359.97438 * 11 10 8 13 13 C 1.50706 * 119.99531 * 180.02562 * 11 10 8 14 14 O 1.42895 * 109.46727 * 180.02562 * 13 11 10 15 15 C 1.35901 * 117.00002 * 180.02562 * 14 13 11 16 16 C 1.38709 * 120.05787 * 180.02562 * 15 14 13 17 17 C 1.50696 * 120.02762 * 359.95504 * 16 15 14 18 18 O 1.42895 * 109.47387 * 75.00248 * 17 16 15 19 19 Si 1.86305 * 109.46827 * 194.99996 * 17 16 15 20 20 C 1.38171 * 119.94081 * 179.97438 * 16 15 14 21 21 C 1.38240 * 120.06065 * 0.02562 * 20 16 15 22 22 C 1.38295 * 120.10794 * 0.02562 * 21 20 16 23 23 C 1.38120 * 120.05704 * 359.97438 * 22 21 20 24 24 C 1.52994 * 109.47426 * 59.99689 * 8 7 6 25 25 C 1.53000 * 109.47160 * 300.00366 * 24 8 7 26 26 H 1.09001 * 109.47411 * 300.00209 * 1 2 3 27 27 H 1.08998 * 109.47112 * 59.99787 * 1 2 3 28 28 H 1.09003 * 109.47548 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.46990 * 239.99649 * 2 1 3 30 30 H 1.09001 * 109.47356 * 60.00373 * 3 2 1 31 31 H 1.09004 * 109.47381 * 179.97438 * 3 2 1 32 32 H 1.08998 * 109.47510 * 299.99601 * 3 2 1 33 33 H 1.09000 * 109.47098 * 299.99701 * 6 4 2 34 34 H 1.09001 * 109.46982 * 60.00318 * 6 4 2 35 35 H 1.08999 * 109.47471 * 180.02562 * 7 6 4 36 36 H 1.09001 * 109.47404 * 59.99689 * 7 6 4 37 37 H 0.97000 * 119.99273 * 265.00079 * 10 8 7 38 38 H 1.09001 * 109.47274 * 59.99532 * 13 11 10 39 39 H 1.09003 * 109.46605 * 299.99484 * 13 11 10 40 40 H 1.08995 * 109.46925 * 314.99539 * 17 16 15 41 41 H 0.96701 * 114.00227 * 180.02562 * 18 17 16 42 42 H 1.48504 * 109.99618 * 178.67522 * 19 17 16 43 43 H 1.48494 * 109.99943 * 299.99497 * 19 17 16 44 44 H 1.08005 * 119.97011 * 180.02562 * 20 16 15 45 45 H 1.07995 * 119.94494 * 180.27435 * 21 20 16 46 46 H 1.07997 * 119.96986 * 179.97438 * 22 21 20 47 47 H 1.08001 * 120.02657 * 180.02562 * 23 22 21 48 48 H 1.09001 * 109.46865 * 59.99961 * 24 8 7 49 49 H 1.08991 * 109.47708 * 180.02562 * 24 8 7 50 50 H 1.08999 * 109.47471 * 179.97438 * 25 24 8 51 51 H 1.08995 * 109.47721 * 299.99858 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7213 1.2493 5 1 1.6766 -0.2074 2.1393 6 6 1.5299 -2.1638 1.2493 7 6 2.0393 -2.8848 2.4988 8 6 3.5693 -2.8849 2.4996 9 1 3.9331 -3.3988 1.6098 10 7 4.0572 -3.5758 3.6958 11 6 4.1858 -4.9174 3.6936 12 8 3.8973 -5.5527 2.7017 13 6 4.6871 -5.6282 4.9244 14 8 4.7359 -7.0345 4.6755 15 6 5.1691 -7.8262 5.6916 16 6 5.2420 -9.2005 5.5189 17 6 4.8400 -9.8177 4.2042 18 8 5.8606 -9.5775 3.2333 19 14 4.6120 -11.6536 4.4241 20 6 5.6833 -10.0031 6.5534 21 6 6.0513 -9.4377 7.7600 22 6 5.9784 -8.0678 7.9351 23 6 5.5380 -7.2611 6.9041 24 6 4.0794 -1.4424 2.4995 25 6 3.5700 -0.7214 1.2500 26 1 -0.3634 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8933 -0.5139 -0.8899 30 1 1.6767 1.9563 0.8900 31 1 3.1300 1.4424 0.0005 32 1 1.6767 1.9563 -0.8900 33 1 0.4399 -2.1637 1.2493 34 1 1.8933 -2.6776 0.3593 35 1 1.6763 -3.9126 2.4987 36 1 1.6757 -2.3708 3.3886 37 1 4.2875 -3.0677 4.4893 38 1 4.0139 -5.4294 5.7583 39 1 5.6862 -5.2682 5.1702 40 1 3.9042 -9.3734 3.8654 41 1 5.6683 -9.9473 2.3607 42 1 4.1844 -12.2694 3.1422 43 1 5.8809 -12.2713 4.8859 44 1 5.7407 -11.0733 6.4193 45 1 6.4001 -10.0664 8.5659 46 1 6.2661 -7.6284 8.8787 47 1 5.4817 -6.1913 7.0412 48 1 3.7156 -0.9284 3.3893 49 1 5.1693 -1.4424 2.4996 50 1 3.9330 0.3064 1.2501 51 1 3.9336 -1.2353 0.3602 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_2989392.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:07:11 Heat of formation + Delta-G solvation = -95.608301 kcal Electronic energy + Delta-G solvation = -29006.319621 eV Core-core repulsion = 25064.686254 eV Total energy + Delta-G solvation = -3941.633367 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.198 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.58936 -40.92851 -39.74661 -38.36772 -37.44199 -36.63976 -34.20180 -32.82816 -31.99140 -31.33874 -30.26016 -28.48787 -28.09462 -26.54913 -24.27194 -23.54608 -23.23543 -22.40929 -21.50616 -21.19561 -20.66083 -19.28681 -18.36943 -18.31417 -17.40250 -17.31957 -17.00161 -16.77700 -16.31047 -15.64273 -15.52667 -15.40180 -15.26194 -15.18436 -14.97461 -14.73276 -14.53822 -14.43152 -14.24474 -13.76427 -13.74066 -13.54972 -13.44103 -13.15791 -12.96885 -12.85321 -12.72263 -12.64707 -12.34991 -12.17193 -12.12547 -12.10896 -11.72660 -11.69026 -11.64929 -11.39834 -11.22030 -11.01253 -10.74429 -10.25257 -10.08746 -9.93545 -9.15639 -4.88711 0.26645 0.46523 1.38740 1.49749 1.54348 1.66830 2.01996 2.59500 2.69969 3.45963 3.52568 3.59862 3.61615 3.72654 3.78478 3.88644 3.92138 3.93802 3.95032 4.06508 4.14181 4.23126 4.25373 4.29837 4.32187 4.36966 4.44155 4.47438 4.54104 4.57201 4.60620 4.68334 4.73067 4.74398 4.90768 4.94396 4.96797 5.00440 5.01935 5.07373 5.11462 5.13732 5.21632 5.30009 5.30460 5.31481 5.39493 5.43807 5.47807 5.53719 5.55255 5.74051 6.28031 6.42778 6.65571 7.14693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.114 4.114 7 C -0.129 4.129 8 C 0.147 3.853 9 H 0.089 0.911 10 N -0.726 5.726 11 C 0.517 3.483 12 O -0.510 6.510 13 C 0.039 3.961 14 O -0.279 6.279 15 C 0.151 3.849 16 C -0.101 4.101 17 C -0.066 4.066 18 O -0.530 6.530 19 Si 0.685 3.315 20 C -0.078 4.078 21 C -0.151 4.151 22 C -0.073 4.073 23 C -0.212 4.212 24 C -0.126 4.126 25 C -0.113 4.113 26 H 0.054 0.946 27 H 0.053 0.947 28 H 0.058 0.942 29 H 0.070 0.930 30 H 0.054 0.946 31 H 0.057 0.943 32 H 0.053 0.947 33 H 0.070 0.930 34 H 0.065 0.935 35 H 0.068 0.932 36 H 0.064 0.936 37 H 0.401 0.599 38 H 0.094 0.906 39 H 0.093 0.907 40 H 0.076 0.924 41 H 0.377 0.623 42 H -0.261 1.261 43 H -0.255 1.255 44 H 0.135 0.865 45 H 0.130 0.870 46 H 0.129 0.871 47 H 0.130 0.870 48 H 0.069 0.931 49 H 0.069 0.931 50 H 0.072 0.928 51 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.586 3.801 4.351 5.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.152 4.152 7 C -0.168 4.168 8 C 0.044 3.956 9 H 0.107 0.893 10 N -0.379 5.379 11 C 0.301 3.699 12 O -0.384 6.384 13 C -0.040 4.040 14 O -0.191 6.191 15 C 0.105 3.895 16 C -0.101 4.101 17 C -0.176 4.176 18 O -0.337 6.337 19 Si 0.587 3.413 20 C -0.096 4.096 21 C -0.169 4.169 22 C -0.091 4.091 23 C -0.231 4.231 24 C -0.164 4.164 25 C -0.151 4.151 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.077 0.923 29 H 0.088 0.912 30 H 0.073 0.927 31 H 0.076 0.924 32 H 0.073 0.927 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.086 0.914 36 H 0.083 0.917 37 H 0.235 0.765 38 H 0.111 0.889 39 H 0.111 0.889 40 H 0.094 0.906 41 H 0.225 0.775 42 H -0.187 1.187 43 H -0.180 1.180 44 H 0.152 0.848 45 H 0.148 0.852 46 H 0.147 0.853 47 H 0.147 0.853 48 H 0.087 0.913 49 H 0.088 0.912 50 H 0.091 0.909 51 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -1.329 2.764 3.669 4.782 hybrid contribution 0.619 0.867 -0.446 1.155 sum -0.711 3.631 3.223 4.907 Atomic orbital electron populations 1.21908 0.95204 1.01924 1.01774 1.21140 0.95823 0.96156 0.98005 1.21908 1.01147 0.95923 1.01802 1.21257 0.94961 0.95697 0.98285 0.91052 1.21617 1.00898 0.94904 0.97772 1.21923 0.94742 1.01327 0.98768 1.21055 0.94069 0.92422 0.88094 0.89253 1.45929 1.68307 1.06253 1.17405 1.20017 0.78342 0.82518 0.89009 1.90776 1.47768 1.65600 1.34241 1.22482 1.02928 0.81473 0.97149 1.86206 1.80664 1.15884 1.36350 1.18787 0.93953 0.90066 0.86702 1.18593 1.05838 0.90362 0.95348 1.24641 0.93374 1.11045 0.88513 1.86599 1.44775 1.79483 1.22872 0.95224 0.85844 0.74274 0.85992 1.20989 0.96247 0.99688 0.92642 1.21048 1.03044 0.95167 0.97682 1.21015 0.96272 0.93582 0.98226 1.21263 1.07550 1.00594 0.93693 1.21809 1.00984 0.94028 0.99561 1.21606 0.95402 1.00715 0.97394 0.92727 0.92751 0.92339 0.91194 0.92727 0.92394 0.92743 0.91167 0.91652 0.91370 0.91731 0.76522 0.88850 0.88934 0.90569 0.77500 1.18654 1.18017 0.84797 0.85235 0.85330 0.85268 0.91256 0.91196 0.90922 0.91554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.13 8.84 37.16 0.33 0.46 16 2 C -0.09 0.10 2.51 -90.63 -0.23 -0.13 16 3 C -0.15 0.18 8.84 37.15 0.33 0.51 16 4 C -0.08 0.12 1.77 -90.62 -0.16 -0.04 16 5 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 6 C -0.11 0.07 4.85 -26.73 -0.13 -0.06 16 7 C -0.13 0.02 5.49 -26.73 -0.15 -0.12 16 8 C 0.15 -0.06 2.45 -67.93 -0.17 -0.22 16 9 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 10 N -0.73 0.80 5.08 -53.80 -0.27 0.53 16 11 C 0.52 1.06 7.87 -10.98 -0.09 0.97 16 12 O -0.51 -3.52 16.16 -14.35 -0.23 -3.76 16 13 C 0.04 0.00 5.22 36.01 0.19 0.19 16 14 O -0.28 -1.12 9.00 -39.34 -0.35 -1.48 16 15 C 0.15 0.48 6.66 -39.21 -0.26 0.22 16 16 C -0.10 -0.33 5.30 -104.47 -0.55 -0.88 16 17 C -0.07 -0.19 2.37 36.00 0.09 -0.11 16 18 O -0.53 -2.37 12.86 -35.23 -0.45 -2.82 16 19 Si 0.69 0.49 30.20 -169.99 -5.13 -4.64 16 20 C -0.08 -0.13 8.66 -39.61 -0.34 -0.47 16 21 C -0.15 -0.07 10.04 -39.56 -0.40 -0.47 16 22 C -0.07 -0.01 10.04 -39.60 -0.40 -0.40 16 23 C -0.21 -0.16 9.04 -39.43 -0.36 -0.51 16 24 C -0.13 0.27 5.39 -26.73 -0.14 0.13 16 25 C -0.11 0.20 4.85 -26.73 -0.13 0.07 16 26 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 28 H 0.06 -0.05 6.43 -51.93 -0.33 -0.38 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.08 6.43 -51.93 -0.33 -0.42 16 32 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.07 -0.04 6.43 -51.93 -0.33 -0.38 16 34 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 36 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.40 -1.71 8.60 -40.82 -0.35 -2.06 16 38 H 0.09 -0.26 7.66 -51.93 -0.40 -0.66 16 39 H 0.09 -0.20 7.67 -51.93 -0.40 -0.60 16 40 H 0.08 0.22 7.83 -51.93 -0.41 -0.19 16 41 H 0.38 0.26 8.74 45.56 0.40 0.65 16 42 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 43 H -0.26 -0.75 6.75 56.52 0.38 -0.37 16 44 H 0.13 0.04 4.90 -52.48 -0.26 -0.22 16 45 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 46 H 0.13 -0.29 8.06 -52.49 -0.42 -0.71 16 47 H 0.13 -0.26 6.30 -52.49 -0.33 -0.59 16 48 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 49 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 50 H 0.07 -0.15 6.43 -51.93 -0.33 -0.48 16 51 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 396.17 15.07 5.97 5.97 Total: 0.00 -8.73 396.17 -11.65 -20.38 By element: Atomic # 1 Polarization: -4.70 SS G_CDS: -8.61 Total: -13.31 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -2.57 Total: -0.88 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -0.27 Total: 0.53 kcal Atomic # 8 Polarization: -7.02 SS G_CDS: -1.04 Total: -8.06 kcal Atomic # 14 Polarization: 0.49 SS G_CDS: -5.13 Total: -4.64 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -8.73 -11.65 -20.38 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_2989392.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.225 kcal (2) G-P(sol) polarization free energy of solvation -8.728 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.383 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.608 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds