Wall clock time and date at job start Sun Mar 7 2021 02:07:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52999 * 109.47179 * 2 1 4 4 C 1.53005 * 109.46840 * 120.00084 * 2 1 3 5 5 H 1.09000 * 109.46891 * 300.00077 * 4 2 1 6 6 C 1.52999 * 109.47303 * 59.99992 * 4 2 1 7 7 C 1.52992 * 109.46921 * 179.97438 * 6 4 2 8 8 C 1.52999 * 109.47689 * 299.99639 * 7 6 4 9 9 H 1.08999 * 109.47014 * 300.00743 * 8 7 6 10 10 N 1.46499 * 109.47493 * 180.02562 * 8 7 6 11 11 C 1.34777 * 119.99665 * 155.28120 * 10 8 7 12 12 O 1.21283 * 119.99990 * 359.71991 * 11 10 8 13 13 C 1.50698 * 119.99538 * 179.72653 * 11 10 8 14 14 O 1.42908 * 109.46887 * 180.02562 * 13 11 10 15 15 C 1.35899 * 116.99727 * 179.97438 * 14 13 11 16 16 C 1.38713 * 120.05408 * 179.71874 * 15 14 13 17 17 N 1.48007 * 120.02643 * 0.02562 * 16 15 14 18 18 O 1.21799 * 120.00094 * 180.02562 * 17 16 15 19 19 O 1.21801 * 119.99898 * 0.02562 * 17 16 15 20 20 C 1.38164 * 119.94491 * 179.75020 * 16 15 14 21 21 C 1.38245 * 120.05504 * 0.52818 * 20 16 15 22 22 C 1.50699 * 119.94625 * 179.77244 * 21 20 16 23 23 O 1.42902 * 109.46987 * 299.97791 * 22 21 20 24 24 Si 1.86298 * 109.47350 * 179.97438 * 22 21 20 25 25 C 1.38290 * 120.11169 * 359.74694 * 21 20 16 26 26 C 1.38123 * 120.05305 * 359.97438 * 25 21 20 27 27 C 1.53008 * 109.46675 * 60.00323 * 8 7 6 28 28 C 1.53002 * 109.46840 * 179.97438 * 4 2 1 29 29 H 1.09000 * 109.47442 * 300.00176 * 1 2 3 30 30 H 1.08996 * 109.46938 * 60.00382 * 1 2 3 31 31 H 1.09009 * 109.47041 * 180.02562 * 1 2 3 32 32 H 1.09006 * 109.47124 * 239.99501 * 2 1 3 33 33 H 1.08996 * 109.46873 * 299.99658 * 3 2 1 34 34 H 1.08999 * 109.46965 * 60.00142 * 3 2 1 35 35 H 1.09003 * 109.46770 * 179.97438 * 3 2 1 36 36 H 1.08999 * 109.46965 * 59.99658 * 6 4 2 37 37 H 1.09006 * 109.47222 * 299.99991 * 6 4 2 38 38 H 1.09009 * 109.47102 * 180.02562 * 7 6 4 39 39 H 1.08999 * 109.47499 * 60.00085 * 7 6 4 40 40 H 0.97001 * 119.99790 * 334.99833 * 10 8 7 41 41 H 1.09003 * 109.47112 * 299.99065 * 13 11 10 42 42 H 1.08993 * 109.47916 * 59.99687 * 13 11 10 43 43 H 1.08001 * 119.97460 * 180.27814 * 20 16 15 44 44 H 1.08998 * 109.47353 * 59.97403 * 22 21 20 45 45 H 0.96693 * 114.00035 * 179.97438 * 23 22 21 46 46 H 1.48501 * 109.99851 * 59.99434 * 24 22 21 47 47 H 1.48497 * 109.99959 * 181.31660 * 24 22 21 48 48 H 1.07998 * 119.97446 * 179.97438 * 25 21 20 49 49 H 1.07999 * 120.02823 * 180.02562 * 26 25 21 50 50 H 1.09000 * 109.47169 * 59.99905 * 27 8 7 51 51 H 1.08995 * 109.47066 * 180.02562 * 27 8 7 52 52 H 1.08999 * 109.47056 * 300.00114 * 28 4 2 53 53 H 1.09000 * 109.46999 * 59.99594 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2493 5 1 1.6766 -0.2075 2.1392 6 6 1.5300 -2.1638 1.2493 7 6 2.0404 -2.8851 2.4982 8 6 3.5704 -2.8853 2.4977 9 1 3.9334 -3.3989 1.6074 10 7 4.0592 -3.5765 3.6933 11 6 5.2834 -4.1402 3.6925 12 8 5.9783 -4.0796 2.7004 13 6 5.7886 -4.8460 4.9245 14 8 7.1009 -5.3550 4.6773 15 6 7.7051 -6.0233 5.6948 16 6 8.9770 -6.5491 5.5220 17 7 9.6781 -6.3824 4.2292 18 8 10.7947 -6.8446 4.0779 19 8 9.1383 -5.7829 3.3166 20 6 9.5913 -7.2236 6.5597 21 6 8.9349 -7.3842 7.7657 22 6 9.6052 -8.1248 8.8941 23 8 9.8980 -9.4606 8.4796 24 14 8.4693 -8.1675 10.3702 25 6 7.6646 -6.8659 7.9386 26 6 7.0485 -6.1857 6.9063 27 6 4.0805 -1.4427 2.4977 28 6 3.5700 -0.7219 1.2490 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0278 0.0005 32 1 1.8934 -0.5139 -0.8900 33 1 1.6767 1.9562 -0.8900 34 1 1.6767 1.9563 0.8900 35 1 3.1301 1.4424 0.0005 36 1 1.8933 -2.6776 0.3593 37 1 0.4399 -2.1638 1.2493 38 1 1.6774 -3.9130 2.4980 39 1 1.6775 -2.3715 3.3884 40 1 3.5034 -3.6250 4.4867 41 1 5.8227 -4.1436 5.7573 42 1 5.1194 -5.6701 5.1714 43 1 10.5834 -7.6293 6.4271 44 1 10.5312 -7.6166 9.1629 45 1 10.3317 -9.9966 9.1575 46 1 7.2029 -8.8578 10.0167 47 1 9.1312 -8.8675 11.5003 48 1 7.1537 -6.9930 8.8816 49 1 6.0566 -5.7808 7.0419 50 1 3.7174 -0.9290 3.3879 51 1 5.1704 -1.4427 2.4969 52 1 3.9329 -1.2359 0.3590 53 1 3.9337 0.3057 1.2487 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_4549638.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:07:55 Heat of formation + Delta-G solvation = -90.995262 kcal Electronic energy + Delta-G solvation = -34990.016167 eV Core-core repulsion = 30217.566401 eV Total energy + Delta-G solvation = -4772.449766 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -43.30446 -41.80277 -41.05496 -39.93616 -39.20881 -37.63899 -37.52042 -36.66721 -34.23295 -33.50679 -32.35592 -31.90243 -30.63355 -28.69311 -28.00365 -27.82879 -26.52448 -24.40585 -23.63525 -23.46363 -22.70185 -21.62554 -21.17454 -20.60725 -20.43612 -19.79075 -19.12686 -18.73463 -18.60740 -18.39247 -17.57131 -17.42458 -17.19553 -16.47752 -16.32087 -15.96196 -15.76759 -15.51275 -15.40077 -15.13203 -15.08321 -14.58633 -14.47018 -14.31470 -14.22556 -14.10966 -13.83563 -13.74753 -13.36885 -13.15334 -13.06651 -12.79671 -12.72024 -12.69977 -12.65364 -12.36445 -12.29268 -12.26442 -12.13520 -12.09017 -12.02457 -11.90787 -11.61575 -11.31579 -11.22054 -10.96312 -10.83595 -10.82632 -10.61717 -10.10214 -9.77287 -4.93099 -1.31633 -0.24287 0.15206 0.34381 1.21581 1.26223 1.47288 1.63266 1.97859 2.02496 2.33695 3.05907 3.21887 3.30271 3.53191 3.58162 3.67548 3.70036 3.71611 3.81293 3.86659 3.95248 4.00710 4.04122 4.13940 4.23647 4.31060 4.32505 4.33512 4.39648 4.51217 4.52600 4.56044 4.62059 4.67012 4.68267 4.81209 4.83448 4.85378 5.02217 5.02702 5.05084 5.07028 5.10331 5.15095 5.18381 5.20805 5.21611 5.30500 5.37073 5.38535 5.49617 5.55995 5.64179 5.75874 6.41786 6.48222 6.53004 7.18589 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.094 4.094 3 C -0.151 4.151 4 C -0.075 4.075 5 H 0.080 0.920 6 C -0.114 4.114 7 C -0.115 4.115 8 C 0.148 3.852 9 H 0.057 0.943 10 N -0.704 5.704 11 C 0.506 3.494 12 O -0.566 6.566 13 C 0.024 3.976 14 O -0.291 6.291 15 C 0.193 3.807 16 C -0.105 4.105 17 N 0.035 4.965 18 O -0.201 6.201 19 O -0.174 6.174 20 C -0.005 4.005 21 C -0.112 4.112 22 C -0.095 4.095 23 O -0.562 6.562 24 Si 0.787 3.213 25 C -0.006 4.006 26 C -0.188 4.188 27 C -0.123 4.123 28 C -0.113 4.113 29 H 0.058 0.942 30 H 0.049 0.951 31 H 0.062 0.938 32 H 0.059 0.941 33 H 0.050 0.950 34 H 0.058 0.942 35 H 0.053 0.947 36 H 0.053 0.947 37 H 0.083 0.917 38 H 0.076 0.924 39 H 0.091 0.909 40 H 0.422 0.578 41 H 0.147 0.853 42 H 0.142 0.858 43 H 0.151 0.849 44 H 0.099 0.901 45 H 0.399 0.601 46 H -0.280 1.280 47 H -0.291 1.291 48 H 0.188 0.812 49 H 0.208 0.792 50 H 0.082 0.918 51 H 0.039 0.961 52 H 0.048 0.952 53 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.149 2.794 13.323 16.980 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.112 4.112 3 C -0.208 4.208 4 C -0.094 4.094 5 H 0.099 0.901 6 C -0.152 4.152 7 C -0.153 4.153 8 C 0.043 3.957 9 H 0.075 0.925 10 N -0.359 5.359 11 C 0.292 3.708 12 O -0.444 6.444 13 C -0.053 4.053 14 O -0.201 6.201 15 C 0.143 3.857 16 C -0.190 4.190 17 N 0.545 4.455 18 O -0.409 6.409 19 O -0.388 6.388 20 C -0.024 4.024 21 C -0.113 4.113 22 C -0.202 4.202 23 O -0.373 6.373 24 Si 0.690 3.310 25 C -0.024 4.024 26 C -0.206 4.206 27 C -0.162 4.162 28 C -0.151 4.151 29 H 0.077 0.923 30 H 0.068 0.932 31 H 0.081 0.919 32 H 0.078 0.922 33 H 0.069 0.931 34 H 0.077 0.923 35 H 0.072 0.928 36 H 0.071 0.929 37 H 0.101 0.899 38 H 0.095 0.905 39 H 0.109 0.891 40 H 0.261 0.739 41 H 0.164 0.836 42 H 0.160 0.840 43 H 0.169 0.831 44 H 0.117 0.883 45 H 0.250 0.750 46 H -0.207 1.207 47 H -0.218 1.218 48 H 0.204 0.796 49 H 0.225 0.775 50 H 0.100 0.900 51 H 0.058 0.942 52 H 0.066 0.934 53 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -10.589 2.514 12.988 16.945 hybrid contribution 1.495 -1.129 -0.934 2.093 sum -9.094 1.385 12.054 15.163 Atomic orbital electron populations 1.21889 0.94711 1.02136 1.01800 1.21143 0.96125 0.96044 0.97924 1.21904 1.01021 0.96058 1.01811 1.21181 0.94039 0.95838 0.98295 0.90139 1.21615 1.01451 0.94754 0.97387 1.21749 0.91535 1.02003 1.00016 1.20975 0.95207 0.92012 0.87467 0.92518 1.45731 1.16326 1.55910 1.17905 1.20540 0.82157 0.78986 0.89112 1.90847 1.57268 1.59715 1.36554 1.23144 0.82500 1.02002 0.97618 1.86474 1.31620 1.66380 1.35666 1.18957 0.88825 0.88754 0.89163 1.20847 0.95201 1.16910 0.86084 1.43877 1.00415 0.97883 1.03349 1.94491 1.05949 1.51603 1.88869 1.94680 1.68449 1.40688 1.34955 1.20833 1.00728 0.90907 0.89902 1.19472 0.95856 1.01890 0.94123 1.25247 1.07722 0.84139 1.03060 1.86544 1.82578 1.23545 1.44641 0.94228 0.75722 0.89258 0.71838 1.21673 0.91477 0.89449 0.99779 1.21791 1.03955 1.05277 0.89573 1.21843 0.99565 0.95276 0.99497 1.21586 0.96026 1.00428 0.97101 0.92269 0.93194 0.91925 0.92225 0.93054 0.92303 0.92751 0.92859 0.89862 0.90506 0.89089 0.73943 0.83557 0.84020 0.83126 0.88276 0.74958 1.20681 1.21827 0.79570 0.77477 0.89982 0.94213 0.93356 0.91297 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.46 8.84 71.98 0.64 1.09 16 2 C -0.09 0.18 2.51 -10.79 -0.03 0.15 16 3 C -0.15 0.20 8.84 71.98 0.64 0.84 16 4 C -0.08 0.26 1.78 -10.79 -0.02 0.24 16 5 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 6 C -0.11 0.52 4.85 30.59 0.15 0.66 16 7 C -0.12 0.79 5.39 30.59 0.16 0.95 16 8 C 0.15 -0.21 2.45 44.99 0.11 -0.10 16 9 H 0.06 0.34 7.58 -2.39 -0.02 0.32 16 10 N -0.70 3.73 5.08 -442.52 -2.25 1.48 16 11 C 0.51 1.12 7.87 87.66 0.69 1.81 16 12 O -0.57 -9.25 16.16 16.00 0.26 -8.99 16 13 C 0.02 -0.15 5.22 71.24 0.37 0.22 16 14 O -0.29 -1.70 7.68 -63.39 -0.49 -2.19 16 15 C 0.19 0.43 6.67 22.51 0.15 0.58 16 16 C -0.11 -0.93 6.87 36.47 0.25 -0.68 16 17 N 0.03 0.63 4.45 -46.24 -0.21 0.43 16 18 O -0.20 -4.00 18.45 18.89 0.35 -3.65 16 19 O -0.17 -4.03 17.24 25.61 0.44 -3.58 16 20 C 0.00 -0.02 9.11 22.25 0.20 0.18 16 21 C -0.11 0.35 5.42 -19.85 -0.11 0.24 16 22 C -0.10 0.57 2.81 71.24 0.20 0.77 16 23 O -0.56 0.82 12.74 -148.98 -1.90 -1.08 16 24 Si 0.79 -7.79 29.78 68.60 2.04 -5.74 16 25 C -0.01 0.06 8.66 22.25 0.19 0.25 16 26 C -0.19 1.70 9.04 22.37 0.20 1.90 16 27 C -0.12 0.02 5.49 30.58 0.17 0.19 16 28 C -0.11 0.02 4.85 30.58 0.15 0.16 16 29 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 30 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 31 H 0.06 -0.25 6.43 -2.38 -0.02 -0.26 16 32 H 0.06 0.01 8.14 -2.38 -0.02 -0.01 16 33 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.06 -0.13 8.14 -2.39 -0.02 -0.14 16 35 H 0.05 -0.03 6.43 -2.39 -0.02 -0.04 16 36 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 37 H 0.08 -0.51 6.43 -2.38 -0.02 -0.53 16 38 H 0.08 -0.58 8.14 -2.38 -0.02 -0.60 16 39 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 40 H 0.42 -6.07 8.60 -92.71 -0.80 -6.87 16 41 H 0.15 -2.28 7.66 -2.39 -0.02 -2.29 16 42 H 0.14 -2.09 7.66 -2.39 -0.02 -2.11 16 43 H 0.15 0.80 7.61 -2.91 -0.02 0.78 16 44 H 0.10 -0.91 7.96 -2.39 -0.02 -0.93 16 45 H 0.40 -3.67 8.74 -74.06 -0.65 -4.32 16 46 H -0.28 1.35 7.11 99.48 0.71 2.05 16 47 H -0.29 1.09 7.11 99.48 0.71 1.80 16 48 H 0.19 -3.15 4.87 -2.91 -0.01 -3.16 16 49 H 0.21 -4.07 6.30 -2.91 -0.02 -4.09 16 50 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 51 H 0.04 0.24 8.14 -2.39 -0.02 0.22 16 52 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 53 H 0.07 0.00 6.43 -2.39 -0.02 -0.02 16 Total: 0.00 -38.06 422.90 1.92 -36.14 By element: Atomic # 1 Polarization: -21.82 SS G_CDS: -0.45 Total: -22.28 kcal Atomic # 6 Polarization: 5.34 SS G_CDS: 4.12 Total: 9.46 kcal Atomic # 7 Polarization: 4.36 SS G_CDS: -2.45 Total: 1.91 kcal Atomic # 8 Polarization: -18.15 SS G_CDS: -1.34 Total: -19.49 kcal Atomic # 14 Polarization: -7.79 SS G_CDS: 2.04 Total: -5.74 kcal Total: -38.06 1.92 -36.14 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_4549638.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.857 kcal (2) G-P(sol) polarization free energy of solvation -38.056 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds