Wall clock time and date at job start Sun Mar 7 2021 02:08:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53002 * 109.47454 * 2 1 4 4 C 1.52997 * 109.46978 * 120.00078 * 2 1 3 5 5 H 1.09002 * 109.47497 * 299.99550 * 4 2 1 6 6 C 1.53002 * 109.47415 * 59.99902 * 4 2 1 7 7 C 1.53000 * 109.47233 * 180.02562 * 6 4 2 8 8 C 1.52997 * 109.47060 * 299.99657 * 7 6 4 9 9 H 1.09002 * 109.47153 * 300.00319 * 8 7 6 10 10 N 1.46500 * 109.47473 * 180.02562 * 8 7 6 11 11 C 1.34777 * 120.00270 * 154.99797 * 10 8 7 12 12 O 1.21288 * 119.99713 * 0.02562 * 11 10 8 13 13 C 1.50697 * 120.00270 * 180.02562 * 11 10 8 14 14 F 1.39898 * 109.47196 * 300.00257 * 13 11 10 15 15 F 1.39906 * 109.46643 * 60.00187 * 13 11 10 16 16 O 1.42895 * 109.47250 * 180.02562 * 13 11 10 17 17 C 1.35906 * 117.00051 * 179.97438 * 16 13 11 18 18 C 1.38729 * 120.05148 * 359.73382 * 17 16 13 19 19 C 1.38153 * 119.93822 * 179.74427 * 18 17 16 20 20 C 1.38267 * 120.05617 * 0.50182 * 19 18 17 21 21 C 1.50695 * 119.94206 * 179.75173 * 20 19 18 22 22 O 1.42899 * 109.47636 * 120.02335 * 21 20 19 23 23 Si 1.86298 * 109.47363 * 0.02562 * 21 20 19 24 24 C 1.38262 * 120.10865 * 359.76959 * 20 19 18 25 25 C 1.38140 * 120.06323 * 359.97438 * 24 20 19 26 26 C 1.52999 * 109.47317 * 59.99960 * 8 7 6 27 27 C 1.52997 * 109.47232 * 179.97438 * 4 2 1 28 28 H 1.09002 * 109.46838 * 300.00606 * 1 2 3 29 29 H 1.08996 * 109.46698 * 60.00102 * 1 2 3 30 30 H 1.09001 * 109.47142 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47097 * 239.99879 * 2 1 3 32 32 H 1.08996 * 109.46876 * 179.97438 * 3 2 1 33 33 H 1.09000 * 109.46497 * 300.00109 * 3 2 1 34 34 H 1.09002 * 109.47067 * 59.99861 * 3 2 1 35 35 H 1.08992 * 109.47063 * 59.99950 * 6 4 2 36 36 H 1.09004 * 109.46733 * 299.99664 * 6 4 2 37 37 H 1.09002 * 109.47398 * 59.99826 * 7 6 4 38 38 H 1.09001 * 109.47194 * 180.02562 * 7 6 4 39 39 H 0.97000 * 119.99491 * 335.00093 * 10 8 7 40 40 H 1.07996 * 120.03184 * 359.97438 * 18 17 16 41 41 H 1.08004 * 119.97077 * 180.27397 * 19 18 17 42 42 H 1.09007 * 109.46587 * 240.02251 * 21 20 19 43 43 H 0.96700 * 113.99266 * 299.99954 * 22 21 20 44 44 H 1.48506 * 110.00200 * 180.02562 * 23 21 20 45 45 H 1.48504 * 110.00079 * 301.32196 * 23 21 20 46 46 H 1.08001 * 119.96852 * 179.97438 * 24 20 19 47 47 H 1.07997 * 120.03350 * 179.97438 * 25 24 20 48 48 H 1.09000 * 109.47486 * 180.02562 * 26 8 7 49 49 H 1.09002 * 109.46716 * 60.00091 * 26 8 7 50 50 H 1.09002 * 109.47153 * 299.99992 * 27 4 2 51 51 H 1.09001 * 109.47289 * 60.00075 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7213 1.2492 5 1 1.6767 -0.2074 2.1393 6 6 1.5300 -2.1638 1.2493 7 6 2.0394 -2.8848 2.4988 8 6 3.5694 -2.8849 2.4994 9 1 3.9331 -3.3989 1.6097 10 7 4.0573 -3.5758 3.6956 11 6 5.2792 -4.1445 3.6941 12 8 5.9751 -4.0838 2.7026 13 6 5.7809 -4.8557 4.9243 14 9 5.8274 -3.9575 5.9959 15 9 4.9174 -5.9110 5.2375 16 8 7.0912 -5.3692 4.6766 17 6 7.6921 -6.0428 5.6926 18 6 7.0363 -6.2013 6.9048 19 6 7.6473 -6.8910 7.9342 20 6 8.9153 -7.4141 7.7606 21 6 9.5816 -8.1611 8.8871 22 8 9.8695 -9.4967 8.4684 23 14 8.4441 -8.2043 10.3619 24 6 9.5732 -7.2526 6.5553 25 6 8.9646 -6.5683 5.5210 26 6 4.0795 -1.4425 2.4994 27 6 3.5699 -0.7219 1.2490 28 1 -0.3633 0.5139 0.8900 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 1.8934 -0.5139 -0.8900 32 1 3.1301 1.4424 0.0005 33 1 1.6767 1.9562 -0.8900 34 1 1.6768 1.9563 0.8900 35 1 1.8933 -2.6776 0.3594 36 1 0.4399 -2.1637 1.2493 37 1 1.6758 -2.3708 3.3886 38 1 1.6765 -3.9126 2.4986 39 1 3.5008 -3.6241 4.4886 40 1 6.0477 -5.7891 7.0424 41 1 7.1354 -7.0185 8.8767 42 1 10.5094 -7.6574 9.1583 43 1 9.0882 -10.0053 8.2115 44 1 9.0899 -8.9379 11.4801 45 1 8.1115 -6.8210 10.7875 46 1 10.5638 -7.6617 6.4222 47 1 9.4791 -6.4421 4.5798 48 1 5.1695 -1.4425 2.4993 49 1 3.7159 -0.9285 3.3891 50 1 3.9329 -1.2360 0.3590 51 1 3.9337 0.3057 1.2488 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_4549640.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:08:00 Heat of formation + Delta-G solvation = -186.852398 kcal Electronic energy + Delta-G solvation = -34304.072587 eV Core-core repulsion = 29419.574628 eV Total energy + Delta-G solvation = -4884.497959 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.179 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -50.91473 -48.88355 -41.58872 -41.30256 -39.94898 -39.25418 -37.28520 -36.90507 -34.41115 -32.46947 -32.04277 -31.94299 -30.28206 -28.43581 -28.00707 -26.30717 -24.72530 -23.85621 -23.53195 -22.71447 -22.20503 -21.40356 -20.70794 -20.50462 -19.79114 -19.70477 -18.54047 -17.76939 -17.49105 -17.09380 -16.79252 -16.48405 -16.27404 -16.02970 -15.86877 -15.67425 -15.45618 -15.37980 -15.31399 -15.16524 -15.13018 -15.10401 -14.60110 -14.52361 -14.39371 -14.36522 -14.25028 -14.22482 -13.61025 -13.41656 -13.07772 -13.04290 -12.88301 -12.71476 -12.40798 -12.35452 -12.15382 -12.12855 -12.05207 -11.89619 -11.65924 -11.63162 -11.31770 -11.09458 -10.98291 -10.47796 -10.41221 -10.21093 -9.59815 -5.01415 -0.00149 0.13651 0.44986 0.62075 1.29751 1.61671 1.65895 1.95089 1.97787 2.44277 2.75037 3.20621 3.47660 3.52957 3.58213 3.63792 3.66232 3.73424 3.74610 3.99421 4.05808 4.07782 4.19191 4.23565 4.29848 4.36059 4.38544 4.41137 4.50169 4.51226 4.62198 4.66203 4.75136 4.80790 4.83257 4.85718 4.88422 5.01323 5.02458 5.02975 5.06950 5.13167 5.14645 5.18722 5.20428 5.27183 5.32625 5.36405 5.37767 5.42770 5.55687 5.63605 5.80377 5.85771 6.45347 6.76315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.092 4.092 3 C -0.151 4.151 4 C -0.079 4.079 5 H 0.077 0.923 6 C -0.112 4.112 7 C -0.120 4.120 8 C 0.144 3.856 9 H 0.079 0.921 10 N -0.682 5.682 11 C 0.516 3.484 12 O -0.509 6.509 13 C 0.435 3.565 14 F -0.172 7.172 15 F -0.169 7.169 16 O -0.306 6.306 17 C 0.085 3.915 18 C -0.193 4.193 19 C -0.077 4.077 20 C -0.141 4.141 21 C -0.069 4.069 22 O -0.554 6.554 23 Si 0.772 3.228 24 C -0.058 4.058 25 C -0.136 4.136 26 C -0.128 4.128 27 C -0.111 4.111 28 H 0.055 0.945 29 H 0.049 0.951 30 H 0.063 0.937 31 H 0.064 0.936 32 H 0.056 0.944 33 H 0.050 0.950 34 H 0.055 0.945 35 H 0.062 0.938 36 H 0.084 0.916 37 H 0.087 0.913 38 H 0.080 0.920 39 H 0.423 0.577 40 H 0.142 0.858 41 H 0.155 0.845 42 H 0.112 0.888 43 H 0.396 0.604 44 H -0.297 1.297 45 H -0.285 1.285 46 H 0.149 0.851 47 H 0.144 0.856 48 H 0.048 0.952 49 H 0.079 0.921 50 H 0.058 0.942 51 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.002 0.466 1.070 7.098 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.110 4.110 3 C -0.209 4.209 4 C -0.097 4.097 5 H 0.095 0.905 6 C -0.150 4.150 7 C -0.157 4.157 8 C 0.042 3.958 9 H 0.097 0.903 10 N -0.335 5.335 11 C 0.294 3.706 12 O -0.382 6.382 13 C 0.357 3.643 14 F -0.153 7.153 15 F -0.150 7.150 16 O -0.223 6.223 17 C 0.042 3.958 18 C -0.211 4.211 19 C -0.095 4.095 20 C -0.142 4.142 21 C -0.179 4.179 22 O -0.362 6.362 23 Si 0.678 3.322 24 C -0.076 4.076 25 C -0.155 4.155 26 C -0.166 4.166 27 C -0.149 4.149 28 H 0.074 0.926 29 H 0.068 0.932 30 H 0.082 0.918 31 H 0.083 0.917 32 H 0.075 0.925 33 H 0.069 0.931 34 H 0.074 0.926 35 H 0.080 0.920 36 H 0.102 0.898 37 H 0.106 0.894 38 H 0.099 0.901 39 H 0.261 0.739 40 H 0.160 0.840 41 H 0.172 0.828 42 H 0.129 0.871 43 H 0.246 0.754 44 H -0.225 1.225 45 H -0.211 1.211 46 H 0.167 0.833 47 H 0.162 0.838 48 H 0.067 0.933 49 H 0.098 0.902 50 H 0.077 0.923 51 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -5.980 0.956 1.146 6.163 hybrid contribution 0.412 0.375 0.227 0.601 sum -5.568 1.331 1.373 5.887 Atomic orbital electron populations 1.21900 0.94909 1.02169 1.01695 1.21126 0.95966 0.95993 0.97954 1.21913 1.01142 0.96117 1.01702 1.21214 0.94290 0.95879 0.98336 0.90484 1.21607 1.01582 0.94637 0.97131 1.21809 0.90980 1.02494 1.00455 1.21345 0.95843 0.92409 0.86219 0.90277 1.45926 1.14888 1.53577 1.19098 1.19433 0.83964 0.80603 0.86636 1.90855 1.56160 1.58154 1.33056 1.21778 0.79658 0.78495 0.84377 1.93191 1.95916 1.67888 1.58354 1.93198 1.70080 1.58242 1.93519 1.86650 1.27930 1.68626 1.39063 1.19256 0.94095 0.95326 0.87111 1.21612 1.02045 1.04532 0.92935 1.21034 0.94064 0.95685 0.98692 1.20499 0.95236 1.01511 0.96941 1.25128 1.06127 0.84274 1.02380 1.86474 1.38566 1.22690 1.88461 0.93766 0.84043 0.80251 0.74119 1.21042 1.00285 0.95123 0.91154 1.20701 0.92375 1.00653 1.01739 1.21913 1.00120 0.94576 1.00004 1.21596 0.95808 1.00624 0.96871 0.92559 0.93176 0.91825 0.91713 0.92513 0.93057 0.92599 0.91969 0.89795 0.89400 0.90095 0.73905 0.84017 0.82824 0.87092 0.75406 1.22507 1.21147 0.83287 0.83839 0.93344 0.90242 0.92343 0.91021 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.60 8.84 71.98 0.64 1.24 16 2 C -0.09 0.33 2.51 -10.79 -0.03 0.30 16 3 C -0.15 0.40 8.84 71.98 0.64 1.04 16 4 C -0.08 0.39 1.78 -10.79 -0.02 0.37 16 5 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 6 C -0.11 0.69 4.85 30.60 0.15 0.84 16 7 C -0.12 0.87 5.39 30.59 0.16 1.04 16 8 C 0.14 -0.37 2.45 44.99 0.11 -0.26 16 9 H 0.08 0.12 7.58 -2.39 -0.02 0.10 16 10 N -0.68 1.59 5.08 -442.53 -2.25 -0.65 16 11 C 0.52 2.51 7.31 87.66 0.64 3.15 16 12 O -0.51 -6.31 16.16 15.98 0.26 -6.05 16 13 C 0.43 1.91 2.05 71.23 0.15 2.05 16 14 F -0.17 -0.49 15.27 44.97 0.69 0.20 16 15 F -0.17 -0.35 15.31 44.97 0.69 0.34 16 16 O -0.31 -2.72 9.60 -73.45 -0.71 -3.42 16 17 C 0.08 0.54 6.48 22.51 0.15 0.69 16 18 C -0.19 -0.60 8.26 22.37 0.18 -0.42 16 19 C -0.08 0.00 8.66 22.26 0.19 0.20 16 20 C -0.14 -0.05 5.39 -19.85 -0.11 -0.16 16 21 C -0.07 0.08 2.82 71.23 0.20 0.28 16 22 O -0.55 0.31 12.77 -148.98 -1.90 -1.59 16 23 Si 0.77 -2.10 29.78 68.60 2.04 -0.05 16 24 C -0.06 -0.10 9.60 22.25 0.21 0.11 16 25 C -0.14 -0.59 9.99 22.37 0.22 -0.36 16 26 C -0.13 0.23 5.50 30.61 0.17 0.40 16 27 C -0.11 0.30 4.85 30.61 0.15 0.45 16 28 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 29 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 30 H 0.06 -0.32 6.43 -2.39 -0.02 -0.34 16 31 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 32 H 0.06 -0.13 6.43 -2.39 -0.02 -0.15 16 33 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 35 H 0.06 -0.29 8.14 -2.39 -0.02 -0.31 16 36 H 0.08 -0.62 6.43 -2.39 -0.02 -0.63 16 37 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 38 H 0.08 -0.65 8.14 -2.39 -0.02 -0.67 16 39 H 0.42 -3.41 8.60 -92.71 -0.80 -4.21 16 40 H 0.14 0.17 5.10 -2.91 -0.01 0.15 16 41 H 0.15 -0.75 4.87 -2.91 -0.01 -0.77 16 42 H 0.11 -0.04 7.96 -2.38 -0.02 -0.06 16 43 H 0.40 -3.33 8.70 -74.06 -0.64 -3.97 16 44 H -0.30 -1.42 7.11 99.48 0.71 -0.71 16 45 H -0.28 -0.53 7.11 99.48 0.71 0.17 16 46 H 0.15 -0.11 8.06 -2.91 -0.02 -0.13 16 47 H 0.14 0.39 8.06 -2.91 -0.02 0.36 16 48 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 49 H 0.08 -0.31 8.14 -2.39 -0.02 -0.32 16 50 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 51 H 0.07 -0.17 6.43 -2.39 -0.02 -0.19 16 Total: 0.00 -16.26 406.11 2.19 -14.07 By element: Atomic # 1 Polarization: -13.33 SS G_CDS: -0.44 Total: -13.77 kcal Atomic # 6 Polarization: 7.13 SS G_CDS: 3.81 Total: 10.94 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -2.25 Total: -0.65 kcal Atomic # 8 Polarization: -8.72 SS G_CDS: -2.35 Total: -11.07 kcal Atomic # 9 Polarization: -0.84 SS G_CDS: 1.38 Total: 0.54 kcal Atomic # 14 Polarization: -2.10 SS G_CDS: 2.04 Total: -0.05 kcal Total: -16.26 2.19 -14.07 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_4549640.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -172.785 kcal (2) G-P(sol) polarization free energy of solvation -16.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -189.047 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.067 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds