Wall clock time and date at job start Sun Mar 7 2021 02:08:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35981 * 117.00229 * 2 1 4 4 C 1.38678 * 119.99866 * 180.02562 * 3 2 1 5 5 C 1.38149 * 119.99764 * 179.97438 * 4 3 2 6 6 C 1.50700 * 119.99860 * 179.97438 * 5 4 3 7 7 O 1.42905 * 109.47003 * 255.01794 * 6 5 4 8 8 Si 1.86296 * 109.47146 * 15.02034 * 6 5 4 9 9 C 1.38675 * 120.00047 * 0.02562 * 5 4 3 10 10 O 1.35991 * 120.00080 * 179.72450 * 9 5 4 11 11 C 1.42899 * 117.00216 * 179.97438 * 10 9 5 12 12 C 1.50695 * 109.47216 * 179.97438 * 11 10 9 13 13 O 1.21282 * 119.99968 * 0.02562 * 12 11 10 14 14 N 1.34776 * 120.00022 * 179.97438 * 12 11 10 15 15 C 1.46498 * 120.00074 * 180.02562 * 14 12 11 16 16 H 1.09003 * 109.47155 * 35.00144 * 15 14 12 17 17 C 1.52997 * 109.47063 * 155.00060 * 15 14 12 18 18 C 1.53007 * 109.46822 * 180.02562 * 17 15 14 19 19 C 1.52997 * 109.47023 * 299.99916 * 18 17 15 20 20 H 1.08997 * 109.47559 * 299.99938 * 19 18 17 21 21 C 1.53001 * 109.46981 * 180.02562 * 19 18 17 22 22 C 1.52997 * 109.47633 * 59.99780 * 21 19 18 23 23 C 1.53000 * 109.47305 * 180.02562 * 21 19 18 24 24 C 1.52997 * 109.47253 * 60.00348 * 19 18 17 25 25 C 1.52998 * 109.46948 * 299.99836 * 24 19 18 26 26 C 1.38714 * 120.00268 * 359.97438 * 9 5 4 27 27 C 1.38113 * 119.99801 * 0.02562 * 26 9 5 28 28 H 1.09000 * 109.46568 * 300.00199 * 1 2 3 29 29 H 1.08996 * 109.47306 * 59.99680 * 1 2 3 30 30 H 1.08996 * 109.47490 * 179.97438 * 1 2 3 31 31 H 1.08001 * 119.99900 * 0.02562 * 4 3 2 32 32 H 1.09004 * 109.47062 * 135.02347 * 6 5 4 33 33 H 0.96698 * 114.00192 * 300.00665 * 7 6 5 34 34 H 1.48498 * 110.00216 * 298.68137 * 8 6 5 35 35 H 1.48504 * 109.99755 * 60.00314 * 8 6 5 36 36 H 1.09001 * 109.47068 * 300.00031 * 11 10 9 37 37 H 1.09005 * 109.47117 * 59.99260 * 11 10 9 38 38 H 0.97005 * 119.99951 * 0.02562 * 14 12 11 39 39 H 1.08999 * 109.47466 * 299.99727 * 17 15 14 40 40 H 1.08997 * 109.47173 * 60.00465 * 17 15 14 41 41 H 1.08991 * 109.47219 * 60.00551 * 18 17 15 42 42 H 1.09005 * 109.46662 * 180.02562 * 18 17 15 43 43 H 1.09003 * 109.46911 * 299.99950 * 21 19 18 44 44 H 1.09002 * 109.47434 * 180.02562 * 22 21 19 45 45 H 1.09002 * 109.47271 * 300.00565 * 22 21 19 46 46 H 1.09003 * 109.46833 * 60.00122 * 22 21 19 47 47 H 1.09005 * 109.46900 * 59.99411 * 23 21 19 48 48 H 1.08998 * 109.47271 * 179.97438 * 23 21 19 49 49 H 1.09003 * 109.46976 * 299.99764 * 23 21 19 50 50 H 1.09003 * 109.47067 * 59.99788 * 24 19 18 51 51 H 1.09002 * 109.47407 * 179.97438 * 24 19 18 52 52 H 1.09003 * 109.47198 * 299.99873 * 25 24 19 53 53 H 1.08996 * 109.47272 * 180.02562 * 25 24 19 54 54 H 1.08001 * 120.00485 * 180.02562 * 26 9 5 55 55 H 1.08005 * 120.00053 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2841 -0.0005 5 6 4.0585 2.5150 -0.0011 6 6 5.5635 2.5938 -0.0011 7 8 6.0209 2.9671 1.3003 8 14 6.2723 0.9320 -0.4555 9 6 3.3033 3.6780 -0.0005 10 8 3.9207 4.8897 0.0046 11 6 3.0808 6.0458 0.0043 12 6 3.9350 7.2873 0.0110 13 8 5.1440 7.1914 0.0151 14 7 3.3555 8.5041 0.0113 15 6 4.1859 9.7109 0.0173 16 1 5.0877 9.5344 -0.5690 17 6 3.4004 10.8735 -0.5929 18 6 4.2679 12.1338 -0.5872 19 6 4.6554 12.4797 0.8519 20 1 3.7539 12.6566 1.4384 21 6 5.5224 13.7403 0.8576 22 6 4.7365 14.9027 0.2476 23 6 5.9104 14.0860 2.2966 24 6 5.4409 11.3172 1.4621 25 6 4.5734 10.0569 1.4564 26 6 1.9180 3.6055 0.0000 27 6 1.2910 2.3750 0.0005 28 1 -0.3632 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3634 -1.0276 -0.0005 31 1 4.0195 0.3782 -0.0014 32 1 5.8883 3.3384 -0.7278 33 1 5.6902 3.8240 1.6026 34 1 5.8629 -0.0858 0.5453 35 1 5.8041 0.5325 -1.8070 36 1 2.4548 6.0399 -0.8880 37 1 2.4482 6.0356 0.8919 38 1 2.3884 8.5807 0.0077 39 1 3.1247 10.6272 -1.6183 40 1 2.4986 11.0501 -0.0066 41 1 5.1694 11.9570 -1.1738 42 1 3.7081 12.9621 -1.0216 43 1 6.4240 13.5638 0.2709 44 1 5.3544 15.8007 0.2512 45 1 4.4604 14.6562 -0.7777 46 1 3.8349 15.0792 0.8342 47 1 6.4705 13.2577 2.7308 48 1 6.5285 14.9838 2.3006 49 1 5.0090 14.2623 2.8836 50 1 6.3425 11.1403 0.8755 51 1 5.7173 11.5638 2.4872 52 1 3.6718 10.2338 2.0429 53 1 5.1328 9.2288 1.8915 54 1 1.3298 4.5113 0.0000 55 1 0.2124 2.3185 0.0014 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_4974302.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:08:15 Heat of formation + Delta-G solvation = -131.400264 kcal Electronic energy + Delta-G solvation = -33254.481867 eV Core-core repulsion = 28837.076634 eV Total energy + Delta-G solvation = -4417.405234 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.213 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.94375 -41.20573 -40.24490 -39.57000 -38.18155 -37.03874 -36.65513 -34.22593 -32.93853 -31.91579 -31.29685 -30.23373 -28.60592 -28.01412 -28.00206 -26.65362 -24.37531 -23.48687 -23.43809 -22.50931 -21.61390 -21.17409 -20.59757 -19.63761 -18.90997 -18.58743 -18.11355 -17.54312 -17.49329 -17.28688 -16.75750 -16.37159 -16.13650 -15.85130 -15.62293 -15.51856 -15.34322 -15.22514 -15.10863 -14.74334 -14.55328 -14.39400 -14.21143 -14.15306 -13.98203 -13.64705 -13.50654 -13.38169 -13.12855 -13.07854 -12.78929 -12.69576 -12.57783 -12.37062 -12.29510 -12.23634 -12.10241 -12.03850 -11.62725 -11.55731 -11.33949 -11.31773 -11.19660 -11.13573 -10.97418 -10.83168 -10.25954 -10.12160 -8.95484 -4.88076 -0.08943 0.19421 1.30511 1.41365 1.44296 1.57834 1.88294 2.21077 2.40573 2.53136 3.39704 3.46359 3.59148 3.66111 3.69942 3.78889 3.81627 3.90930 3.97040 4.01783 4.02515 4.03868 4.10705 4.13124 4.25610 4.29449 4.32264 4.32459 4.32534 4.38242 4.50869 4.54272 4.55151 4.65566 4.66764 4.67250 4.80021 4.82577 4.85697 4.98890 5.01129 5.01621 5.03705 5.05650 5.09027 5.14050 5.19368 5.20205 5.27181 5.29213 5.35747 5.37497 5.48126 5.55142 5.63120 6.04553 6.29125 6.45461 6.51650 7.13011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.342 6.342 3 C 0.088 3.912 4 C -0.142 4.142 5 C -0.119 4.119 6 C -0.086 4.086 7 O -0.544 6.544 8 Si 0.812 3.188 9 C 0.097 3.903 10 O -0.310 6.310 11 C 0.036 3.964 12 C 0.513 3.487 13 O -0.567 6.567 14 N -0.707 5.707 15 C 0.149 3.851 16 H 0.061 0.939 17 C -0.117 4.117 18 C -0.113 4.113 19 C -0.076 4.076 20 H 0.077 0.923 21 C -0.093 4.093 22 C -0.149 4.149 23 C -0.151 4.151 24 C -0.112 4.112 25 C -0.123 4.123 26 C -0.155 4.155 27 C -0.159 4.159 28 H 0.069 0.931 29 H 0.070 0.930 30 H 0.115 0.885 31 H 0.124 0.876 32 H 0.078 0.922 33 H 0.372 0.628 34 H -0.286 1.286 35 H -0.266 1.266 36 H 0.124 0.876 37 H 0.125 0.875 38 H 0.420 0.580 39 H 0.076 0.924 40 H 0.087 0.913 41 H 0.056 0.944 42 H 0.081 0.919 43 H 0.062 0.938 44 H 0.050 0.950 45 H 0.062 0.938 46 H 0.057 0.943 47 H 0.055 0.945 48 H 0.051 0.949 49 H 0.056 0.944 50 H 0.051 0.949 51 H 0.069 0.931 52 H 0.077 0.923 53 H 0.042 0.958 54 H 0.174 0.826 55 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.518 5.393 -1.163 10.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.256 6.256 3 C 0.043 3.957 4 C -0.160 4.160 5 C -0.120 4.120 6 C -0.193 4.193 7 O -0.350 6.350 8 Si 0.713 3.287 9 C 0.052 3.948 10 O -0.223 6.223 11 C -0.042 4.042 12 C 0.299 3.701 13 O -0.445 6.445 14 N -0.361 5.361 15 C 0.044 3.956 16 H 0.080 0.920 17 C -0.155 4.155 18 C -0.151 4.151 19 C -0.095 4.095 20 H 0.095 0.905 21 C -0.112 4.112 22 C -0.206 4.206 23 C -0.208 4.208 24 C -0.150 4.150 25 C -0.162 4.162 26 C -0.173 4.173 27 C -0.177 4.177 28 H 0.088 0.912 29 H 0.089 0.911 30 H 0.133 0.867 31 H 0.142 0.858 32 H 0.096 0.904 33 H 0.220 0.780 34 H -0.213 1.213 35 H -0.192 1.192 36 H 0.142 0.858 37 H 0.143 0.857 38 H 0.257 0.743 39 H 0.094 0.906 40 H 0.105 0.895 41 H 0.075 0.925 42 H 0.100 0.900 43 H 0.080 0.920 44 H 0.069 0.931 45 H 0.081 0.919 46 H 0.076 0.924 47 H 0.074 0.926 48 H 0.070 0.930 49 H 0.075 0.925 50 H 0.070 0.930 51 H 0.087 0.913 52 H 0.096 0.904 53 H 0.061 0.939 54 H 0.192 0.808 55 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -7.255 3.811 -1.421 8.318 hybrid contribution -1.792 1.012 0.316 2.082 sum -9.047 4.823 -1.105 10.312 Atomic orbital electron populations 1.23391 0.75959 1.05741 1.02634 1.86080 1.23876 1.26640 1.89008 1.18985 0.91696 0.85640 0.99360 1.20155 0.92878 0.96865 1.06128 1.19554 0.96826 0.90595 1.05006 1.25392 0.91171 1.14215 0.88537 1.86652 1.73919 1.42255 1.32222 0.92490 0.90007 0.69774 0.76412 1.18702 0.91579 0.84299 1.00232 1.86095 1.35362 1.11655 1.89233 1.22756 0.92726 0.81869 1.06814 1.20478 0.88366 0.85428 0.75856 1.90773 1.16559 1.87310 1.49876 1.45790 1.11443 1.04163 1.74691 1.20982 0.94196 0.83768 0.96612 0.92037 1.21759 0.98967 0.93051 1.01708 1.21609 0.99800 0.97239 0.96468 1.21183 0.98395 0.93448 0.96435 0.90453 1.21136 0.98421 0.94947 0.96651 1.21893 1.00126 0.97485 1.01091 1.21908 1.01415 1.01227 0.96267 1.21586 0.98094 0.93960 1.01393 1.21848 1.00484 0.97487 0.96368 1.21464 0.92136 1.00031 1.03653 1.21435 1.01689 0.90674 1.03904 0.91211 0.91131 0.86721 0.85840 0.90428 0.78014 1.21339 1.19208 0.85843 0.85745 0.74263 0.90560 0.89485 0.92542 0.90002 0.91986 0.93131 0.91923 0.92435 0.92629 0.93008 0.92474 0.92988 0.91280 0.90432 0.93896 0.80834 0.81654 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.21 10.50 -93.34 -0.98 -3.19 16 3 C 0.09 0.60 6.69 22.49 0.15 0.75 16 4 C -0.14 -1.44 8.59 22.35 0.19 -1.24 16 5 C -0.12 -1.06 5.27 -19.78 -0.10 -1.16 16 6 C -0.09 -0.74 2.33 71.24 0.17 -0.58 16 7 O -0.54 -5.67 12.65 -148.98 -1.89 -7.56 16 8 Si 0.81 4.90 30.40 68.60 2.09 6.98 16 9 C 0.10 0.46 6.62 22.49 0.15 0.60 16 10 O -0.31 -1.41 8.55 -74.41 -0.64 -2.05 16 11 C 0.04 -0.16 5.22 71.23 0.37 0.22 16 12 C 0.51 0.82 7.87 87.66 0.69 1.51 16 13 O -0.57 -7.35 16.16 16.00 0.26 -7.09 16 14 N -0.71 3.46 5.08 -442.54 -2.25 1.21 16 15 C 0.15 -0.29 2.45 44.99 0.11 -0.18 16 16 H 0.06 0.27 7.58 -2.39 -0.02 0.25 16 17 C -0.12 0.78 5.39 30.60 0.16 0.95 16 18 C -0.11 0.55 4.85 30.60 0.15 0.70 16 19 C -0.08 0.29 1.77 -10.80 -0.02 0.27 16 20 H 0.08 -0.35 8.14 -2.39 -0.02 -0.36 16 21 C -0.09 0.23 2.51 -10.79 -0.03 0.20 16 22 C -0.15 0.49 8.84 71.98 0.64 1.13 16 23 C -0.15 0.28 8.84 71.98 0.64 0.91 16 24 C -0.11 0.12 4.85 30.59 0.15 0.27 16 25 C -0.12 0.10 5.50 30.59 0.17 0.27 16 26 C -0.15 0.19 9.03 22.35 0.20 0.39 16 27 C -0.16 -0.04 9.03 22.35 0.20 0.17 16 28 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 29 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 30 H 0.11 -0.69 8.14 -2.39 -0.02 -0.71 16 31 H 0.12 1.43 4.93 -2.91 -0.01 1.42 16 32 H 0.08 0.65 7.83 -2.38 -0.02 0.63 16 33 H 0.37 2.93 8.58 -74.06 -0.64 2.29 16 34 H -0.29 -3.29 6.81 99.48 0.68 -2.61 16 35 H -0.27 -2.25 7.11 99.48 0.71 -1.54 16 36 H 0.12 -1.29 7.67 -2.39 -0.02 -1.31 16 37 H 0.12 -1.32 7.65 -2.38 -0.02 -1.34 16 38 H 0.42 -5.28 8.60 -92.70 -0.80 -6.08 16 39 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 40 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 41 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 42 H 0.08 -0.51 6.43 -2.38 -0.02 -0.53 16 43 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 44 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 45 H 0.06 -0.26 6.43 -2.39 -0.02 -0.28 16 46 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 47 H 0.05 -0.07 6.43 -2.38 -0.02 -0.08 16 48 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 49 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 50 H 0.05 0.09 8.14 -2.39 -0.02 0.07 16 51 H 0.07 -0.06 6.43 -2.39 -0.02 -0.08 16 52 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 53 H 0.04 0.20 8.14 -2.39 -0.02 0.18 16 54 H 0.17 -1.71 6.29 -2.91 -0.02 -1.73 16 55 H 0.17 -1.04 6.29 -2.91 -0.02 -1.06 16 Total: 0.00 -22.95 425.04 1.17 -21.78 By element: Atomic # 1 Polarization: -15.79 SS G_CDS: -0.52 Total: -16.31 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: 5.10 Total: 6.23 kcal Atomic # 7 Polarization: 3.46 SS G_CDS: -2.25 Total: 1.21 kcal Atomic # 8 Polarization: -16.65 SS G_CDS: -3.24 Total: -19.89 kcal Atomic # 14 Polarization: 4.90 SS G_CDS: 2.09 Total: 6.98 kcal Total: -22.95 1.17 -21.78 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_4974302.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.615 kcal (2) G-P(sol) polarization free energy of solvation -22.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.570 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.169 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.785 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.400 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds