Wall clock time and date at job start Sun Mar 7 2021 02:08:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52991 * 109.47475 * 2 1 4 4 C 1.53007 * 109.47129 * 120.00271 * 2 1 3 5 5 H 1.09005 * 109.46570 * 299.99792 * 4 2 1 6 6 C 1.52995 * 109.47476 * 59.99420 * 4 2 1 7 7 C 1.52995 * 109.47599 * 180.02562 * 6 4 2 8 8 C 1.53001 * 109.46902 * 300.00516 * 7 6 4 9 9 H 1.09005 * 109.47225 * 299.99381 * 8 7 6 10 10 N 1.46497 * 109.47074 * 179.97438 * 8 7 6 11 11 C 1.34784 * 120.00136 * 154.99784 * 10 8 7 12 12 O 1.21698 * 119.99563 * 354.71113 * 11 10 8 13 13 C 1.46665 * 120.00032 * 174.71101 * 11 10 8 14 14 C 1.37889 * 126.22870 * 4.93087 * 13 11 10 15 15 C 1.39879 * 107.09555 * 179.88256 * 14 13 11 16 16 Br 1.89096 * 126.07632 * 180.11090 * 15 14 13 17 17 C 1.35509 * 107.85081 * 0.38429 * 15 14 13 18 18 C 1.50700 * 125.57106 * 179.73693 * 17 15 14 19 19 O 1.42898 * 109.47204 * 210.02709 * 18 17 15 20 20 Si 1.86301 * 109.47192 * 330.02979 * 18 17 15 21 21 N 1.35606 * 108.85580 * 359.76078 * 17 15 14 22 22 C 1.46498 * 125.67165 * 180.02562 * 21 17 15 23 23 C 1.52995 * 109.47415 * 59.99372 * 8 7 6 24 24 C 1.52991 * 109.47128 * 179.97438 * 4 2 1 25 25 H 1.08998 * 109.46881 * 60.00098 * 1 2 3 26 26 H 1.09000 * 109.47523 * 180.02562 * 1 2 3 27 27 H 1.09006 * 109.46639 * 299.99861 * 1 2 3 28 28 H 1.09002 * 109.46727 * 239.99660 * 2 1 3 29 29 H 1.09001 * 109.46731 * 300.00287 * 3 2 1 30 30 H 1.09005 * 109.47169 * 59.99629 * 3 2 1 31 31 H 1.08995 * 109.47485 * 180.02562 * 3 2 1 32 32 H 1.09005 * 109.47174 * 300.00659 * 6 4 2 33 33 H 1.09006 * 109.46821 * 59.99808 * 6 4 2 34 34 H 1.09002 * 109.46921 * 59.99774 * 7 6 4 35 35 H 1.08991 * 109.47499 * 180.02562 * 7 6 4 36 36 H 0.96997 * 120.00045 * 334.99860 * 10 8 7 37 37 H 1.08006 * 126.45188 * 0.02562 * 14 13 11 38 38 H 1.09005 * 109.46347 * 90.02759 * 18 17 15 39 39 H 0.96697 * 113.99854 * 60.00242 * 19 18 17 40 40 H 1.48495 * 110.00112 * 179.97438 * 20 18 17 41 41 H 1.48497 * 109.99687 * 301.31550 * 20 18 17 42 42 H 1.09001 * 109.47470 * 273.72097 * 22 21 17 43 43 H 1.09000 * 109.47304 * 33.73073 * 22 21 17 44 44 H 1.09000 * 109.46587 * 153.72344 * 22 21 17 45 45 H 1.09002 * 109.47168 * 60.00276 * 23 8 7 46 46 H 1.09005 * 109.47174 * 179.97438 * 23 8 7 47 47 H 1.09005 * 109.47231 * 299.99394 * 24 4 2 48 48 H 1.09000 * 109.47518 * 59.99213 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 1.2493 5 1 1.6767 -0.2074 2.1392 6 6 1.5300 -2.1638 1.2494 7 6 2.0394 -2.8849 2.4988 8 6 3.5694 -2.8849 2.4994 9 1 3.9332 -3.3989 1.6096 10 7 4.0573 -3.5748 3.6961 11 6 5.2793 -4.1435 3.6951 12 8 5.9380 -4.1682 2.6722 13 6 5.8151 -4.7324 4.9269 14 6 5.1472 -4.8608 6.1264 15 6 6.0270 -5.4759 7.0231 16 35 5.6563 -5.9105 8.8257 17 6 7.1944 -5.6996 6.3723 18 6 8.4214 -6.3404 6.9681 19 8 9.5887 -5.8186 6.3301 20 14 8.4922 -5.9692 8.7923 21 7 7.0781 -5.2521 5.0975 22 6 8.1229 -5.3124 4.0723 23 6 4.0795 -1.4425 2.4993 24 6 3.5700 -0.7219 1.2489 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8901 28 1 1.8933 -0.5139 -0.8900 29 1 1.6767 1.9562 -0.8900 30 1 1.6767 1.9563 0.8900 31 1 3.1300 1.4424 -0.0005 32 1 0.4399 -2.1637 1.2493 33 1 1.8933 -2.6776 0.3593 34 1 1.6758 -2.3709 3.3886 35 1 1.6764 -3.9126 2.4986 36 1 3.5009 -3.6225 4.4892 37 1 4.1345 -4.5478 6.3337 38 1 8.3769 -7.4192 6.8182 39 1 9.6930 -4.8617 6.4227 40 1 9.6975 -6.5961 9.3918 41 1 8.5210 -4.5007 9.0110 42 1 8.7636 -4.4344 4.1543 43 1 8.7204 -6.2129 4.2149 44 1 7.6620 -5.3349 3.0848 45 1 3.7159 -0.9284 3.3891 46 1 5.1695 -1.4425 2.5002 47 1 3.9329 -1.2361 0.3590 48 1 3.9337 0.3056 1.2486 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_5000100.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:08:24 Heat of formation + Delta-G solvation = -42.100874 kcal Electronic energy + Delta-G solvation = -28146.955709 eV Core-core repulsion = 24249.307017 eV Total energy + Delta-G solvation = -3897.648692 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.104 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.93104 -40.98404 -39.61206 -38.00130 -36.75862 -34.78639 -34.17773 -32.40687 -31.90826 -31.24917 -29.53235 -28.00545 -27.41099 -26.88343 -24.15510 -23.47527 -22.96764 -21.48137 -21.34872 -20.66688 -20.46156 -19.02317 -18.36660 -17.44156 -17.25603 -16.69136 -16.32852 -15.95374 -15.70857 -15.51549 -15.27736 -15.14136 -15.06294 -14.70592 -14.56277 -14.48473 -14.40897 -14.17351 -14.11960 -13.73293 -13.37439 -13.20427 -13.07174 -12.81379 -12.77344 -12.65835 -12.54843 -12.29756 -12.11712 -12.09113 -12.02961 -11.65511 -11.61865 -11.32906 -11.28545 -11.00437 -10.94779 -10.85617 -10.17458 -9.89847 -9.35918 -4.70243 0.13378 0.33506 0.88574 1.20013 1.42854 1.55696 1.92129 2.12507 2.25919 3.05981 3.27182 3.50515 3.65787 3.70871 3.74986 3.81641 4.03235 4.07176 4.12167 4.20911 4.30243 4.32980 4.33295 4.38966 4.39253 4.48969 4.54899 4.61112 4.63347 4.67777 4.68190 4.81079 4.83286 5.01799 5.02697 5.03848 5.09613 5.14564 5.19490 5.20877 5.22759 5.29806 5.36175 5.38284 5.48572 5.55651 5.56907 5.64213 5.75424 6.21577 6.40490 7.04552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.092 4.092 3 C -0.151 4.151 4 C -0.077 4.077 5 H 0.077 0.923 6 C -0.112 4.112 7 C -0.118 4.118 8 C 0.150 3.850 9 H 0.067 0.933 10 N -0.699 5.699 11 C 0.590 3.410 12 O -0.578 6.578 13 C -0.058 4.058 14 C -0.090 4.090 15 C -0.191 4.191 16 Br 0.091 6.909 17 C 0.057 3.943 18 C -0.041 4.041 19 O -0.542 6.542 20 Si 0.630 3.370 21 N -0.391 5.391 22 C 0.066 3.934 23 C -0.123 4.123 24 C -0.111 4.111 25 H 0.050 0.950 26 H 0.062 0.938 27 H 0.056 0.944 28 H 0.063 0.937 29 H 0.051 0.949 30 H 0.056 0.944 31 H 0.055 0.945 32 H 0.082 0.918 33 H 0.057 0.943 34 H 0.086 0.914 35 H 0.076 0.924 36 H 0.417 0.583 37 H 0.188 0.812 38 H 0.140 0.860 39 H 0.385 0.615 40 H -0.269 1.269 41 H -0.280 1.280 42 H 0.085 0.915 43 H 0.102 0.898 44 H 0.094 0.906 45 H 0.076 0.924 46 H 0.042 0.958 47 H 0.054 0.946 48 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.139 0.938 1.697 6.438 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.096 4.096 5 H 0.095 0.905 6 C -0.150 4.150 7 C -0.156 4.156 8 C 0.046 3.954 9 H 0.086 0.914 10 N -0.350 5.350 11 C 0.378 3.622 12 O -0.460 6.460 13 C -0.172 4.172 14 C -0.117 4.117 15 C -0.276 4.276 16 Br 0.175 6.825 17 C -0.066 4.066 18 C -0.152 4.152 19 O -0.349 6.349 20 Si 0.531 3.469 21 N -0.063 5.063 22 C -0.074 4.074 23 C -0.161 4.161 24 C -0.149 4.149 25 H 0.069 0.931 26 H 0.081 0.919 27 H 0.075 0.925 28 H 0.081 0.919 29 H 0.070 0.930 30 H 0.075 0.925 31 H 0.074 0.926 32 H 0.100 0.900 33 H 0.076 0.924 34 H 0.104 0.896 35 H 0.095 0.905 36 H 0.255 0.745 37 H 0.205 0.795 38 H 0.158 0.842 39 H 0.234 0.766 40 H -0.195 1.195 41 H -0.205 1.205 42 H 0.103 0.897 43 H 0.120 0.880 44 H 0.112 0.888 45 H 0.094 0.906 46 H 0.061 0.939 47 H 0.072 0.928 48 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -5.023 0.545 1.795 5.361 hybrid contribution 0.972 0.914 -0.960 1.644 sum -4.050 1.459 0.835 4.385 Atomic orbital electron populations 1.21898 0.94865 1.02150 1.01733 1.21127 0.96008 0.95998 0.97925 1.21908 1.01088 0.96097 1.01741 1.21194 0.94265 0.95845 0.98261 0.90503 1.21598 1.01427 0.94691 0.97259 1.21770 0.91732 1.02044 1.00085 1.21039 0.95216 0.91984 0.87154 0.91441 1.45641 1.16133 1.55225 1.18005 1.17018 0.82098 0.77312 0.85760 1.90791 1.60023 1.60533 1.34636 1.20184 0.87499 1.12770 0.96700 1.21517 1.00642 1.00401 0.89121 1.20687 0.97545 1.15993 0.93385 1.96313 1.84315 1.93165 1.08723 1.21047 0.97904 1.02985 0.84633 1.24724 0.80267 1.02079 1.08081 1.86553 1.42893 1.28603 1.76831 0.92726 0.93911 0.83108 0.77124 1.43926 1.11144 1.42006 1.09222 1.22463 0.89419 1.04934 0.90561 1.21864 0.99632 0.95130 0.99498 1.21584 0.95844 1.00436 0.97003 0.93135 0.91890 0.92483 0.91888 0.93020 0.92526 0.92598 0.89992 0.92377 0.89553 0.90540 0.74532 0.79465 0.84208 0.76553 1.19506 1.20497 0.89654 0.87987 0.88766 0.90571 0.93921 0.92752 0.91268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.50 8.84 71.98 0.64 1.13 16 2 C -0.09 0.24 2.51 -10.79 -0.03 0.22 16 3 C -0.15 0.30 8.84 71.98 0.64 0.94 16 4 C -0.08 0.29 1.78 -10.80 -0.02 0.28 16 5 H 0.08 -0.33 8.14 -2.38 -0.02 -0.35 16 6 C -0.11 0.54 4.85 30.59 0.15 0.69 16 7 C -0.12 0.71 5.39 30.59 0.16 0.87 16 8 C 0.15 -0.20 2.50 44.99 0.11 -0.09 16 9 H 0.07 0.27 7.51 -2.38 -0.02 0.25 16 10 N -0.70 1.44 5.06 -446.50 -2.26 -0.82 16 11 C 0.59 2.63 7.74 86.44 0.67 3.30 16 12 O -0.58 -6.72 14.20 -4.34 -0.06 -6.78 16 13 C -0.06 -0.16 6.88 40.35 0.28 0.12 16 14 C -0.09 0.16 10.34 22.58 0.23 0.39 16 15 C -0.19 -0.01 6.16 22.04 0.14 0.12 16 16 Br 0.09 -0.25 28.24 -20.37 -0.58 -0.82 16 17 C 0.06 0.11 6.15 41.34 0.25 0.36 16 18 C -0.04 -0.04 2.90 71.24 0.21 0.17 16 19 O -0.54 -1.03 10.48 -148.98 -1.56 -2.59 16 20 Si 0.63 1.68 27.10 68.60 1.86 3.53 16 21 N -0.39 -1.33 3.16 -519.61 -1.64 -2.98 16 22 C 0.07 0.15 9.39 127.77 1.20 1.35 16 23 C -0.12 0.08 5.50 30.61 0.17 0.25 16 24 C -0.11 0.16 4.85 30.61 0.15 0.31 16 25 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 26 H 0.06 -0.26 6.43 -2.39 -0.02 -0.28 16 27 H 0.06 -0.20 8.14 -2.38 -0.02 -0.22 16 28 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 29 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 30 H 0.06 -0.13 8.14 -2.38 -0.02 -0.15 16 31 H 0.06 -0.09 6.43 -2.39 -0.02 -0.10 16 32 H 0.08 -0.50 6.43 -2.38 -0.02 -0.52 16 33 H 0.06 -0.16 8.14 -2.38 -0.02 -0.18 16 34 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 35 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.42 -3.40 7.50 -92.71 -0.70 -4.10 16 37 H 0.19 -1.66 7.45 -2.91 -0.02 -1.68 16 38 H 0.14 -0.17 7.96 -2.38 -0.02 -0.19 16 39 H 0.39 -0.86 8.70 -74.06 -0.64 -1.50 16 40 H -0.27 -2.37 7.11 99.48 0.71 -1.66 16 41 H -0.28 -2.15 7.11 99.48 0.71 -1.44 16 42 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 43 H 0.10 0.09 7.05 -2.39 -0.02 0.07 16 44 H 0.09 0.54 6.02 -2.39 -0.01 0.52 16 45 H 0.08 -0.21 8.14 -2.39 -0.02 -0.22 16 46 H 0.04 0.18 8.14 -2.38 -0.02 0.16 16 47 H 0.05 0.04 8.14 -2.38 -0.02 0.02 16 48 H 0.07 -0.09 6.43 -2.39 -0.02 -0.10 16 Total: 0.00 -13.65 380.81 0.37 -13.27 By element: Atomic # 1 Polarization: -12.90 SS G_CDS: -0.33 Total: -13.23 kcal Atomic # 6 Polarization: 5.47 SS G_CDS: 4.95 Total: 10.41 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -3.90 Total: -3.80 kcal Atomic # 8 Polarization: -7.75 SS G_CDS: -1.62 Total: -9.37 kcal Atomic # 14 Polarization: 1.68 SS G_CDS: 1.86 Total: 3.53 kcal Atomic # 35 Polarization: -0.25 SS G_CDS: -0.58 Total: -0.82 kcal Total: -13.65 0.37 -13.27 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_5000100.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.826 kcal (2) G-P(sol) polarization free energy of solvation -13.648 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.475 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.275 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds