Wall clock time and date at job start Sun Mar 7 2021 02:08:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52999 * 109.47179 * 2 1 4 4 C 1.53005 * 109.46840 * 120.00084 * 2 1 3 5 5 H 1.09000 * 109.46891 * 300.00077 * 4 2 1 6 6 C 1.52999 * 109.47303 * 59.99992 * 4 2 1 7 7 C 1.52992 * 109.46921 * 179.97438 * 6 4 2 8 8 C 1.52999 * 109.47689 * 299.99639 * 7 6 4 9 9 H 1.08999 * 109.47014 * 300.00743 * 8 7 6 10 10 N 1.46499 * 109.47493 * 180.02562 * 8 7 6 11 11 C 1.34777 * 119.99665 * 155.28120 * 10 8 7 12 12 O 1.21283 * 119.99990 * 359.71991 * 11 10 8 13 13 C 1.50698 * 119.99538 * 179.72653 * 11 10 8 14 14 O 1.42908 * 109.46887 * 180.02562 * 13 11 10 15 15 C 1.35921 * 116.99673 * 179.97438 * 14 13 11 16 16 C 1.38794 * 120.05491 * 179.97438 * 15 14 13 17 17 Br 1.89097 * 120.03680 * 359.97438 * 16 15 14 18 18 C 1.38233 * 119.92521 * 180.02562 * 16 15 14 19 19 C 1.38236 * 120.04893 * 0.02562 * 18 16 15 20 20 C 1.50696 * 119.94272 * 179.97438 * 19 18 16 21 21 O 1.42902 * 109.47262 * 65.00087 * 20 19 18 22 22 Si 1.86309 * 109.47214 * 184.99905 * 20 19 18 23 23 C 1.38283 * 120.11633 * 0.02562 * 19 18 16 24 24 C 1.38143 * 120.07238 * 359.67987 * 23 19 18 25 25 C 1.53008 * 109.46675 * 60.00323 * 8 7 6 26 26 C 1.53002 * 109.46840 * 179.97438 * 4 2 1 27 27 H 1.09000 * 109.47442 * 300.00176 * 1 2 3 28 28 H 1.08996 * 109.46938 * 60.00382 * 1 2 3 29 29 H 1.09009 * 109.47041 * 180.02562 * 1 2 3 30 30 H 1.09006 * 109.47124 * 239.99501 * 2 1 3 31 31 H 1.09003 * 109.46770 * 179.97438 * 3 2 1 32 32 H 1.08996 * 109.46873 * 299.99658 * 3 2 1 33 33 H 1.08999 * 109.46965 * 60.00142 * 3 2 1 34 34 H 1.08999 * 109.46965 * 59.99658 * 6 4 2 35 35 H 1.09006 * 109.47222 * 299.99991 * 6 4 2 36 36 H 1.09009 * 109.47102 * 180.02562 * 7 6 4 37 37 H 1.08999 * 109.47499 * 60.00085 * 7 6 4 38 38 H 0.97001 * 119.99790 * 334.99833 * 10 8 7 39 39 H 1.09003 * 109.47112 * 299.99065 * 13 11 10 40 40 H 1.08993 * 109.47916 * 59.99687 * 13 11 10 41 41 H 1.08007 * 119.97475 * 180.02562 * 18 16 15 42 42 H 1.08998 * 109.47356 * 305.00323 * 20 19 18 43 43 H 0.96697 * 114.00287 * 180.02562 * 21 20 19 44 44 H 1.48496 * 110.00072 * 300.00189 * 22 20 19 45 45 H 1.48498 * 109.99531 * 61.32060 * 22 20 19 46 46 H 1.08005 * 119.96125 * 179.97438 * 23 19 18 47 47 H 1.08003 * 120.02437 * 180.31497 * 24 23 19 48 48 H 1.09000 * 109.47169 * 59.99905 * 25 8 7 49 49 H 1.08995 * 109.47066 * 180.02562 * 25 8 7 50 50 H 1.08999 * 109.47056 * 300.00114 * 26 4 2 51 51 H 1.09000 * 109.46999 * 59.99594 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2493 5 1 1.6766 -0.2075 2.1392 6 6 1.5300 -2.1638 1.2493 7 6 2.0404 -2.8851 2.4982 8 6 3.5704 -2.8853 2.4977 9 1 3.9334 -3.3989 1.6074 10 7 4.0592 -3.5765 3.6933 11 6 5.2834 -4.1402 3.6925 12 8 5.9783 -4.0796 2.7004 13 6 5.7886 -4.8460 4.9245 14 8 7.1009 -5.3550 4.6773 15 6 7.7052 -6.0234 5.6950 16 6 8.9800 -6.5449 5.5239 17 35 9.8783 -6.3271 3.8742 18 6 9.5918 -7.2246 6.5604 19 6 8.9348 -7.3854 7.7660 20 6 9.6038 -8.1273 8.8942 21 8 10.7555 -7.3999 9.3259 22 14 8.4117 -8.3029 10.3152 23 6 7.6642 -6.8674 7.9381 24 6 7.0506 -6.1820 6.9076 25 6 4.0805 -1.4427 2.4977 26 6 3.5700 -0.7219 1.2490 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0278 0.0005 30 1 1.8934 -0.5139 -0.8900 31 1 3.1301 1.4424 0.0005 32 1 1.6767 1.9562 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.8933 -2.6776 0.3593 35 1 0.4399 -2.1638 1.2493 36 1 1.6774 -3.9130 2.4980 37 1 1.6775 -2.3715 3.3884 38 1 3.5034 -3.6250 4.4867 39 1 5.8227 -4.1436 5.7573 40 1 5.1194 -5.6701 5.1714 41 1 10.5840 -7.6304 6.4283 42 1 9.9066 -9.1161 8.5497 43 1 11.2370 -7.8201 10.0516 44 1 7.9912 -6.9616 10.7941 45 1 7.2239 -9.0851 9.8879 46 1 7.1529 -6.9948 8.8810 47 1 6.0602 -5.7734 7.0446 48 1 3.7174 -0.9290 3.3879 49 1 5.1704 -1.4427 2.4969 50 1 3.9329 -1.2359 0.3590 51 1 3.9337 0.3057 1.2487 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_6201210.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:08:33 Heat of formation + Delta-G solvation = -87.501774 kcal Electronic energy + Delta-G solvation = -30522.352537 eV Core-core repulsion = 26241.252693 eV Total energy + Delta-G solvation = -4281.099844 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.108 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.83101 -41.08268 -39.89703 -39.03489 -37.29563 -36.70705 -34.28049 -33.75802 -32.15606 -31.94841 -30.86710 -30.30741 -28.67212 -28.03250 -26.34316 -24.46998 -23.66083 -23.50747 -22.35657 -21.65903 -21.20008 -20.62618 -19.72431 -18.59277 -18.33434 -17.61566 -17.50047 -17.27225 -16.76763 -16.36283 -15.94800 -15.79340 -15.59367 -15.36783 -15.17912 -15.11549 -14.73794 -14.60656 -14.46252 -14.30411 -14.15518 -14.01675 -13.91226 -13.60085 -13.41073 -13.09716 -12.83024 -12.71463 -12.63613 -12.36793 -12.31123 -12.19676 -12.12884 -12.06657 -12.02480 -11.92624 -11.65217 -11.35192 -11.30436 -11.26408 -11.00672 -10.87687 -10.31007 -10.16426 -10.10511 -9.44642 -4.90406 -0.23786 -0.02264 0.51179 1.30958 1.32863 1.39131 1.68041 1.96153 2.21888 2.41811 3.29040 3.38313 3.53608 3.57673 3.63416 3.67314 3.77018 3.84395 3.92553 3.95320 3.95473 4.00182 4.09576 4.18636 4.26472 4.29729 4.35305 4.41737 4.48039 4.51360 4.52284 4.62921 4.64734 4.69690 4.77145 4.79530 4.80758 4.98114 4.99336 5.01160 5.06126 5.07743 5.11526 5.16306 5.17552 5.26259 5.31088 5.33213 5.35067 5.45044 5.52805 5.60652 5.91909 6.40144 6.91597 7.08697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.076 4.076 5 H 0.078 0.922 6 C -0.113 4.113 7 C -0.116 4.116 8 C 0.148 3.852 9 H 0.060 0.940 10 N -0.706 5.706 11 C 0.512 3.488 12 O -0.566 6.566 13 C 0.031 3.969 14 O -0.301 6.301 15 C 0.149 3.851 16 C -0.141 4.141 17 Br -0.043 7.043 18 C -0.030 4.030 19 C -0.119 4.119 20 C -0.081 4.081 21 O -0.566 6.566 22 Si 0.776 3.224 23 C -0.076 4.076 24 C -0.190 4.190 25 C -0.124 4.124 26 C -0.112 4.112 27 H 0.057 0.943 28 H 0.050 0.950 29 H 0.062 0.938 30 H 0.061 0.939 31 H 0.054 0.946 32 H 0.051 0.949 33 H 0.057 0.943 34 H 0.055 0.945 35 H 0.083 0.917 36 H 0.076 0.924 37 H 0.087 0.913 38 H 0.420 0.580 39 H 0.127 0.873 40 H 0.130 0.870 41 H 0.148 0.852 42 H 0.093 0.907 43 H 0.404 0.596 44 H -0.288 1.288 45 H -0.282 1.282 46 H 0.139 0.861 47 H 0.176 0.824 48 H 0.078 0.922 49 H 0.040 0.960 50 H 0.050 0.950 51 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.083 -1.951 8.355 10.518 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.112 4.112 3 C -0.208 4.208 4 C -0.094 4.094 5 H 0.096 0.904 6 C -0.151 4.151 7 C -0.154 4.154 8 C 0.044 3.956 9 H 0.079 0.921 10 N -0.360 5.360 11 C 0.298 3.702 12 O -0.444 6.444 13 C -0.046 4.046 14 O -0.213 6.213 15 C 0.101 3.899 16 C -0.221 4.221 17 Br 0.042 6.958 18 C -0.050 4.050 19 C -0.121 4.121 20 C -0.190 4.190 21 O -0.376 6.376 22 Si 0.680 3.320 23 C -0.094 4.094 24 C -0.209 4.209 25 C -0.163 4.163 26 C -0.150 4.150 27 H 0.076 0.924 28 H 0.069 0.931 29 H 0.081 0.919 30 H 0.080 0.920 31 H 0.073 0.927 32 H 0.070 0.930 33 H 0.076 0.924 34 H 0.074 0.926 35 H 0.101 0.899 36 H 0.095 0.905 37 H 0.106 0.894 38 H 0.258 0.742 39 H 0.145 0.855 40 H 0.147 0.853 41 H 0.166 0.834 42 H 0.111 0.889 43 H 0.255 0.745 44 H -0.216 1.216 45 H -0.209 1.209 46 H 0.156 0.844 47 H 0.193 0.807 48 H 0.097 0.903 49 H 0.059 0.941 50 H 0.069 0.931 51 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -6.170 -1.229 6.643 9.149 hybrid contribution -0.046 0.177 -0.242 0.303 sum -6.215 -1.052 6.401 8.984 Atomic orbital electron populations 1.21892 0.94731 1.02150 1.01795 1.21138 0.96111 0.96032 0.97879 1.21906 1.01037 0.96063 1.01805 1.21186 0.94084 0.95853 0.98318 0.90362 1.21609 1.01464 0.94724 0.97304 1.21758 0.91582 1.02025 1.00058 1.21000 0.95216 0.92009 0.87370 0.92126 1.45779 1.16372 1.55886 1.17971 1.20436 0.82096 0.78767 0.88892 1.90786 1.57267 1.59971 1.36394 1.22871 0.83439 1.01207 0.97125 1.86256 1.30880 1.67929 1.36256 1.18739 0.91227 0.92045 0.87892 1.21328 0.95625 1.09830 0.95293 1.96759 1.76309 1.97008 1.25732 1.20961 0.99593 0.94257 0.90183 1.19653 0.95046 1.02234 0.95134 1.24884 0.95900 0.96339 1.01868 1.86452 1.41380 1.51691 1.58086 0.94025 0.77051 0.79400 0.81486 1.21077 0.94491 0.95070 0.98736 1.21452 1.03062 1.04910 0.91516 1.21849 0.99597 0.95274 0.99531 1.21579 0.95992 1.00431 0.97018 0.92391 0.93092 0.91905 0.92026 0.92713 0.92954 0.92429 0.92594 0.89859 0.90495 0.89398 0.74191 0.85508 0.85263 0.83389 0.88868 0.74466 1.21588 1.20851 0.84351 0.80706 0.90324 0.94132 0.93072 0.91271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.41 8.84 71.98 0.64 1.04 16 2 C -0.09 0.15 2.51 -10.79 -0.03 0.13 16 3 C -0.15 0.16 8.84 71.98 0.64 0.80 16 4 C -0.08 0.22 1.78 -10.79 -0.02 0.20 16 5 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 6 C -0.11 0.45 4.85 30.59 0.15 0.60 16 7 C -0.12 0.66 5.39 30.59 0.16 0.82 16 8 C 0.15 -0.06 2.45 44.99 0.11 0.05 16 9 H 0.06 0.37 7.58 -2.39 -0.02 0.35 16 10 N -0.71 2.18 5.08 -442.52 -2.25 -0.07 16 11 C 0.51 2.09 7.87 87.66 0.69 2.78 16 12 O -0.57 -9.09 16.16 16.00 0.26 -8.83 16 13 C 0.03 -0.06 5.22 71.24 0.37 0.31 16 14 O -0.30 -2.35 9.01 -73.62 -0.66 -3.01 16 15 C 0.15 0.94 6.68 22.52 0.15 1.09 16 16 C -0.14 -1.23 6.24 22.40 0.14 -1.09 16 17 Br -0.04 -0.48 33.16 -20.37 -0.68 -1.16 16 18 C -0.03 -0.18 9.42 22.27 0.21 0.03 16 19 C -0.12 -0.42 5.38 -19.86 -0.11 -0.53 16 20 C -0.08 0.17 2.79 71.23 0.20 0.37 16 21 O -0.57 0.65 12.81 -148.98 -1.91 -1.26 16 22 Si 0.78 -3.86 29.85 68.60 2.05 -1.81 16 23 C -0.08 -0.14 8.66 22.26 0.19 0.05 16 24 C -0.19 -0.10 9.04 22.36 0.20 0.10 16 25 C -0.12 -0.10 5.49 30.58 0.17 0.07 16 26 C -0.11 -0.02 4.85 30.58 0.15 0.13 16 27 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 28 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 29 H 0.06 -0.23 6.43 -2.38 -0.02 -0.24 16 30 H 0.06 0.00 8.14 -2.38 -0.02 -0.01 16 31 H 0.05 -0.02 6.43 -2.39 -0.02 -0.04 16 32 H 0.05 -0.03 8.14 -2.39 -0.02 -0.05 16 33 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 34 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 35 H 0.08 -0.46 6.43 -2.38 -0.02 -0.48 16 36 H 0.08 -0.49 8.14 -2.38 -0.02 -0.51 16 37 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 38 H 0.42 -4.66 8.60 -92.71 -0.80 -5.46 16 39 H 0.13 -1.05 7.65 -2.39 -0.02 -1.07 16 40 H 0.13 -1.14 7.67 -2.39 -0.02 -1.16 16 41 H 0.15 0.63 8.06 -2.91 -0.02 0.61 16 42 H 0.09 -0.53 7.96 -2.39 -0.02 -0.55 16 43 H 0.40 -4.72 8.74 -74.06 -0.65 -5.36 16 44 H -0.29 -0.40 7.05 99.48 0.70 0.30 16 45 H -0.28 0.11 7.11 99.48 0.71 0.81 16 46 H 0.14 -0.13 4.86 -2.91 -0.01 -0.14 16 47 H 0.18 -1.34 6.30 -2.91 -0.02 -1.36 16 48 H 0.08 -0.17 8.14 -2.39 -0.02 -0.18 16 49 H 0.04 0.27 8.14 -2.39 -0.02 0.25 16 50 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 51 H 0.07 0.02 6.43 -2.39 -0.02 0.01 16 Total: 0.00 -25.33 417.36 0.36 -24.97 By element: Atomic # 1 Polarization: -15.31 SS G_CDS: -0.46 Total: -15.77 kcal Atomic # 6 Polarization: 2.92 SS G_CDS: 4.01 Total: 6.94 kcal Atomic # 7 Polarization: 2.18 SS G_CDS: -2.25 Total: -0.07 kcal Atomic # 8 Polarization: -10.79 SS G_CDS: -2.31 Total: -13.10 kcal Atomic # 14 Polarization: -3.86 SS G_CDS: 2.05 Total: -1.81 kcal Atomic # 35 Polarization: -0.48 SS G_CDS: -0.68 Total: -1.16 kcal Total: -25.33 0.36 -24.97 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_6201210.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.533 kcal (2) G-P(sol) polarization free energy of solvation -25.334 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.365 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.969 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.502 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds