Wall clock time and date at job start Sun Mar 7 2021 02:08:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53004 * 109.47031 * 2 1 4 4 C 1.52996 * 109.47071 * 120.00012 * 2 1 3 5 5 H 1.09000 * 109.47791 * 299.99817 * 4 2 1 6 6 C 1.52995 * 109.47473 * 60.00426 * 4 2 1 7 7 C 1.52996 * 109.47473 * 179.97438 * 6 4 2 8 8 C 1.53006 * 109.47071 * 299.99574 * 7 6 4 9 9 H 1.09006 * 109.47065 * 300.00356 * 8 7 6 10 10 N 1.46492 * 109.47186 * 179.97438 * 8 7 6 11 11 C 1.34777 * 120.00003 * 154.99853 * 10 8 7 12 12 O 1.21640 * 120.00062 * 0.02562 * 11 10 8 13 13 C 1.47190 * 120.00433 * 179.97438 * 11 10 8 14 14 C 1.36010 * 123.45579 * 0.02562 * 13 11 10 15 15 S 1.70454 * 110.81487 * 179.69575 * 14 13 11 16 16 C 1.75506 * 92.44355 * 0.26810 * 15 14 13 17 17 C 1.50695 * 124.70909 * 180.02562 * 16 15 14 18 18 O 1.42900 * 109.47631 * 244.97650 * 17 16 15 19 19 Si 1.86299 * 109.47353 * 4.97891 * 17 16 15 20 20 C 1.32768 * 110.57618 * 0.02562 * 16 15 14 21 21 C 1.53004 * 109.47031 * 59.99988 * 8 7 6 22 22 C 1.53000 * 109.46802 * 300.00264 * 21 8 7 23 23 H 1.09000 * 109.46664 * 299.99480 * 1 2 3 24 24 H 1.08993 * 109.47512 * 59.99919 * 1 2 3 25 25 H 1.09001 * 109.46900 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.47166 * 239.99939 * 2 1 3 27 27 H 1.09006 * 109.46896 * 60.00265 * 3 2 1 28 28 H 1.08993 * 109.47319 * 179.97438 * 3 2 1 29 29 H 1.09003 * 109.47055 * 300.00156 * 3 2 1 30 30 H 1.09000 * 109.47333 * 59.99725 * 6 4 2 31 31 H 1.09002 * 109.46710 * 299.99944 * 6 4 2 32 32 H 1.09001 * 109.47284 * 179.97438 * 7 6 4 33 33 H 1.08994 * 109.47390 * 59.99269 * 7 6 4 34 34 H 0.97000 * 120.00489 * 335.00181 * 10 8 7 35 35 H 1.08002 * 124.59604 * 359.96898 * 14 13 11 36 36 H 1.09000 * 109.47031 * 124.97803 * 17 16 15 37 37 H 0.96705 * 113.99856 * 59.99506 * 18 17 16 38 38 H 1.48503 * 110.00043 * 179.97438 * 19 17 16 39 39 H 1.48496 * 109.99915 * 301.31549 * 19 17 16 40 40 H 1.07999 * 123.45731 * 180.02562 * 20 16 15 41 41 H 1.08994 * 109.46771 * 59.99820 * 21 8 7 42 42 H 1.08993 * 109.47503 * 180.02562 * 21 8 7 43 43 H 1.09000 * 109.47496 * 299.99235 * 22 21 8 44 44 H 1.09001 * 109.46883 * 179.97438 * 22 21 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 1.2492 5 1 1.6768 -0.2075 2.1393 6 6 1.5302 -2.1637 1.2492 7 6 2.0407 -2.8851 2.4981 8 6 3.5707 -2.8851 2.4975 9 1 3.9337 -3.3988 1.6072 10 7 4.0596 -3.5754 3.6936 11 6 5.2815 -4.1439 3.6914 12 8 5.9787 -4.0836 2.6964 13 6 5.7730 -4.8370 4.8933 14 6 5.0539 -4.9462 6.0426 15 16 5.9246 -5.8167 7.2215 16 6 7.2984 -6.0377 6.1518 17 6 8.5617 -6.7728 6.5184 18 8 9.6599 -5.8584 6.5260 19 14 8.3716 -7.5290 8.2104 20 6 7.0699 -5.4673 4.9749 21 6 4.0807 -1.4426 2.4975 22 6 3.5701 -0.7212 1.2486 23 1 -0.3633 0.5138 0.8901 24 1 -0.3634 0.5138 -0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 1.8934 -0.5138 -0.8900 27 1 1.6767 1.9563 0.8901 28 1 3.1300 1.4426 0.0005 29 1 1.6767 1.9564 -0.8900 30 1 1.8935 -2.6776 0.3593 31 1 0.4402 -2.1637 1.2492 32 1 1.6770 -3.9127 2.4983 33 1 1.6778 -2.3715 3.3883 34 1 3.5038 -3.6233 4.4871 35 1 4.0635 -4.5405 6.1872 36 1 8.7493 -7.5596 5.7878 37 1 9.5609 -5.1301 7.1545 38 1 9.6108 -8.2574 8.5833 39 1 8.0840 -6.4698 9.2106 40 1 7.7788 -5.4784 4.1602 41 1 3.7177 -0.9290 3.3876 42 1 5.1706 -1.4425 2.4965 43 1 3.9331 -1.2348 0.3583 44 1 3.9330 0.3066 1.2488 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_6894386.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:08:57 Heat of formation + Delta-G solvation = -63.344220 kcal Electronic energy + Delta-G solvation = -23415.274128 eV Core-core repulsion = 20038.411895 eV Total energy + Delta-G solvation = -3376.862234 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.139 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.24618 -39.93830 -38.80007 -37.22031 -36.57893 -34.16367 -31.96274 -31.86053 -29.45460 -28.08012 -26.97373 -25.75622 -23.66843 -23.50977 -21.91704 -21.29724 -20.74502 -20.27560 -19.04412 -18.04431 -17.82057 -17.07530 -16.44773 -16.39580 -15.84090 -15.62304 -15.41726 -15.21514 -15.11513 -14.59870 -14.57101 -14.29994 -14.25131 -14.02940 -13.63717 -13.56503 -13.40813 -13.13976 -12.84280 -12.69309 -12.66510 -12.41133 -12.30835 -12.14305 -12.09407 -11.82400 -11.66477 -11.37765 -11.19603 -10.98494 -10.85041 -10.68023 -10.09251 -9.98629 -9.51821 -5.12868 -0.37332 0.32578 0.66943 0.91304 1.16470 1.49039 1.85061 2.13128 2.39604 3.23682 3.51221 3.61455 3.63152 3.72193 3.83198 3.95671 3.99400 4.09516 4.25761 4.26659 4.29126 4.35162 4.44735 4.47518 4.50620 4.59521 4.63111 4.70254 4.75727 4.75895 4.92788 4.95888 4.98295 5.02818 5.05101 5.10503 5.14181 5.16257 5.20907 5.25300 5.32878 5.34598 5.48265 5.52747 5.57917 6.28282 6.49284 7.25440 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.113 4.113 7 C -0.126 4.126 8 C 0.146 3.854 9 H 0.090 0.910 10 N -0.723 5.723 11 C 0.578 3.422 12 O -0.531 6.531 13 C -0.155 4.155 14 C -0.207 4.207 15 S 0.196 5.804 16 C -0.242 4.242 17 C -0.033 4.033 18 O -0.522 6.522 19 Si 0.650 3.350 20 C -0.053 4.053 21 C -0.129 4.129 22 C -0.114 4.114 23 H 0.053 0.947 24 H 0.053 0.947 25 H 0.057 0.943 26 H 0.070 0.930 27 H 0.053 0.947 28 H 0.058 0.942 29 H 0.053 0.947 30 H 0.066 0.934 31 H 0.072 0.928 32 H 0.069 0.931 33 H 0.067 0.933 34 H 0.397 0.603 35 H 0.171 0.829 36 H 0.128 0.872 37 H 0.377 0.623 38 H -0.234 1.234 39 H -0.238 1.238 40 H 0.156 0.844 41 H 0.063 0.937 42 H 0.068 0.932 43 H 0.065 0.935 44 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.125 -0.573 3.395 6.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.151 4.151 7 C -0.164 4.164 8 C 0.042 3.958 9 H 0.108 0.892 10 N -0.374 5.374 11 C 0.363 3.637 12 O -0.408 6.408 13 C -0.173 4.173 14 C -0.345 4.345 15 S 0.462 5.538 16 C -0.358 4.358 17 C -0.145 4.145 18 O -0.329 6.329 19 Si 0.548 3.452 20 C -0.082 4.082 21 C -0.167 4.167 22 C -0.152 4.152 23 H 0.073 0.927 24 H 0.072 0.928 25 H 0.076 0.924 26 H 0.088 0.912 27 H 0.072 0.928 28 H 0.077 0.923 29 H 0.072 0.928 30 H 0.085 0.915 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.086 0.914 34 H 0.232 0.768 35 H 0.188 0.812 36 H 0.146 0.854 37 H 0.225 0.775 38 H -0.157 1.157 39 H -0.162 1.162 40 H 0.174 0.826 41 H 0.081 0.919 42 H 0.086 0.914 43 H 0.084 0.916 44 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -4.405 -1.410 4.533 6.476 hybrid contribution 0.287 1.612 -1.102 1.973 sum -4.118 0.201 3.431 5.364 Atomic orbital electron populations 1.21909 0.95242 1.01838 1.01782 1.21145 0.95728 0.96226 0.98022 1.21909 1.01257 0.95896 1.01751 1.21253 0.95222 0.95473 0.98247 0.91095 1.21600 1.00872 0.95182 0.97419 1.21812 0.93766 1.01335 0.99495 1.21046 0.93715 0.92707 0.88292 0.89193 1.45943 1.17589 1.56870 1.17035 1.17618 0.81270 0.77955 0.86827 1.90824 1.56115 1.59627 1.34258 1.20290 0.96189 1.06120 0.94670 1.25792 1.05116 1.05214 0.98367 1.83149 1.06600 1.49254 1.14802 1.24737 1.01877 1.10351 0.98846 1.24410 0.82787 0.94612 1.12720 1.86650 1.41548 1.40565 1.64122 0.95256 0.89410 0.85605 0.74919 1.21064 0.94779 0.95023 0.97336 1.21919 1.01336 0.94808 0.98669 1.21618 0.95004 1.00740 0.97815 0.92748 0.92751 0.92384 0.91179 0.92754 0.92338 0.92751 0.91538 0.90962 0.91208 0.91391 0.76821 0.81181 0.85445 0.77464 1.15698 1.16243 0.82616 0.91855 0.91369 0.91630 0.91223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.16 8.84 37.16 0.33 0.49 16 2 C -0.09 0.08 2.51 -90.62 -0.23 -0.15 16 3 C -0.15 0.10 8.84 37.16 0.33 0.43 16 4 C -0.08 0.10 1.78 -90.62 -0.16 -0.06 16 5 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 6 C -0.11 0.17 4.85 -26.74 -0.13 0.04 16 7 C -0.13 0.22 5.39 -26.73 -0.14 0.08 16 8 C 0.15 0.02 2.45 -67.93 -0.17 -0.15 16 9 H 0.09 0.21 7.58 -51.93 -0.39 -0.19 16 10 N -0.72 0.05 5.05 -54.95 -0.28 -0.23 16 11 C 0.58 1.71 7.76 -12.62 -0.10 1.61 16 12 O -0.53 -3.68 16.46 5.24 0.09 -3.59 16 13 C -0.15 -0.21 5.98 -104.63 -0.63 -0.83 16 14 C -0.21 0.28 10.38 29.93 0.31 0.59 16 15 S 0.20 -0.33 20.20 -107.50 -2.17 -2.50 16 16 C -0.24 0.00 5.65 -36.18 -0.20 -0.20 16 17 C -0.03 0.02 2.94 36.00 0.11 0.12 16 18 O -0.52 -0.58 12.88 -35.23 -0.45 -1.03 16 19 Si 0.65 -0.95 30.92 -169.99 -5.26 -6.21 16 20 C -0.05 -0.10 9.95 -39.02 -0.39 -0.48 16 21 C -0.13 -0.05 5.49 -26.73 -0.15 -0.19 16 22 C -0.11 0.03 4.85 -26.73 -0.13 -0.09 16 23 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 25 H 0.06 -0.08 6.43 -51.93 -0.33 -0.41 16 26 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 28 H 0.06 -0.03 6.43 -51.93 -0.33 -0.37 16 29 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.07 -0.14 6.43 -51.93 -0.33 -0.47 16 32 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.40 -1.12 7.10 -40.82 -0.29 -1.41 16 35 H 0.17 -0.73 7.01 -52.49 -0.37 -1.10 16 36 H 0.13 -0.15 7.96 -51.93 -0.41 -0.56 16 37 H 0.38 -0.70 8.70 45.56 0.40 -0.30 16 38 H -0.23 -0.34 7.11 56.52 0.40 0.06 16 39 H -0.24 0.01 7.11 56.52 0.40 0.41 16 40 H 0.16 0.44 8.06 -52.49 -0.42 0.01 16 41 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 43 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 44 H 0.07 -0.02 6.43 -51.93 -0.33 -0.35 16 LS Contribution 357.20 15.07 5.38 5.38 Total: 0.00 -6.00 357.20 -11.13 -17.13 By element: Atomic # 1 Polarization: -3.07 SS G_CDS: -7.10 Total: -10.17 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -1.35 Total: 1.21 kcal Atomic # 7 Polarization: 0.05 SS G_CDS: -0.28 Total: -0.23 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -0.37 Total: -4.62 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.26 Total: -6.21 kcal Atomic # 16 Polarization: -0.33 SS G_CDS: -2.17 Total: -2.50 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -6.00 -11.13 -17.13 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_6894386.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.210 kcal (2) G-P(sol) polarization free energy of solvation -6.000 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.210 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.134 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.134 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds