Wall clock time and date at job start Sun Mar 7 2021 02:09:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36775 * 125.79936 * 2 1 4 4 C 1.47264 * 126.94216 * 359.97438 * 3 2 1 5 5 O 1.21625 * 119.99720 * 0.02562 * 4 3 2 6 6 N 1.34773 * 119.99854 * 180.02562 * 4 3 2 7 7 C 1.46498 * 119.99862 * 180.02562 * 6 4 3 8 8 H 1.09000 * 109.47133 * 324.99701 * 7 6 4 9 9 C 1.53001 * 109.47571 * 84.99664 * 7 6 4 10 10 C 1.52992 * 109.47553 * 179.97438 * 9 7 6 11 11 C 1.53001 * 109.47294 * 300.00433 * 10 9 7 12 12 H 1.09000 * 109.46814 * 299.99812 * 11 10 9 13 13 C 1.53005 * 109.47091 * 179.97438 * 11 10 9 14 14 C 1.52996 * 109.47125 * 59.99919 * 13 11 10 15 15 C 1.53002 * 109.46571 * 179.97438 * 13 11 10 16 16 C 1.52996 * 109.47203 * 59.99864 * 11 10 9 17 17 C 1.53001 * 109.47178 * 205.00037 * 7 6 4 18 18 C 1.46690 * 106.11279 * 179.97438 * 3 2 1 19 19 C 1.34485 * 106.33274 * 359.97438 * 18 3 2 20 20 C 1.50696 * 125.56785 * 179.97438 * 19 18 3 21 21 O 1.42894 * 109.47519 * 300.00177 * 20 19 18 22 22 Si 1.86298 * 109.47155 * 179.97438 * 20 19 18 23 23 N 1.34655 * 125.80597 * 179.97438 * 2 1 3 24 24 H 1.09006 * 109.46576 * 270.01009 * 1 2 3 25 25 H 1.08993 * 109.47545 * 30.00969 * 1 2 3 26 26 H 1.09005 * 109.46979 * 150.01944 * 1 2 3 27 27 H 0.96998 * 119.99992 * 0.02562 * 6 4 3 28 28 H 1.08997 * 109.47089 * 300.00508 * 9 7 6 29 29 H 1.09000 * 109.46861 * 59.99871 * 9 7 6 30 30 H 1.08999 * 109.47389 * 179.97438 * 10 9 7 31 31 H 1.09000 * 109.47036 * 60.00109 * 10 9 7 32 32 H 1.09000 * 109.46706 * 299.99771 * 13 11 10 33 33 H 1.09000 * 109.47278 * 59.99781 * 14 13 11 34 34 H 1.08995 * 109.47331 * 180.02562 * 14 13 11 35 35 H 1.08997 * 109.47117 * 300.00144 * 14 13 11 36 36 H 1.08997 * 109.47222 * 60.00118 * 15 13 11 37 37 H 1.09005 * 109.46582 * 180.02562 * 15 13 11 38 38 H 1.09000 * 109.47502 * 299.99386 * 15 13 11 39 39 H 1.08998 * 109.47364 * 180.02562 * 16 11 10 40 40 H 1.09000 * 109.47449 * 59.99705 * 16 11 10 41 41 H 1.09000 * 109.46814 * 299.99860 * 17 7 6 42 42 H 1.08997 * 109.47046 * 59.99853 * 17 7 6 43 43 H 1.08004 * 126.82773 * 180.26241 * 18 3 2 44 44 H 1.09005 * 109.47133 * 60.00540 * 20 19 18 45 45 H 0.96697 * 113.99864 * 300.00186 * 21 20 19 46 46 H 1.48503 * 109.99835 * 58.68229 * 22 20 19 47 47 H 1.48498 * 110.00178 * 180.02562 * 22 20 19 48 48 H 0.97009 * 124.84925 * 0.04461 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5157 -0.0005 5 8 0.6838 2.7839 -0.0006 6 7 2.7849 3.5055 -0.0010 7 6 2.3502 4.9045 -0.0009 8 1 1.4383 5.0017 -0.5901 9 6 2.0793 5.3544 1.4361 10 6 1.6260 6.8157 1.4362 11 6 2.7234 7.6901 0.8263 12 1 3.6352 7.5925 1.4155 13 6 2.2698 9.1514 0.8258 14 6 1.9985 9.6016 2.2626 15 6 3.3675 10.0258 0.2164 16 6 2.9942 7.2403 -0.6108 17 6 3.4472 5.7793 -0.6111 18 6 3.6882 0.6152 0.0006 19 6 3.6095 -0.7274 0.0015 20 6 4.7820 -1.6741 0.0019 21 8 5.5756 -1.4501 -1.1651 22 14 4.1616 -3.4308 0.0040 23 7 2.2948 -1.0921 0.0005 24 1 -0.3633 0.0002 1.0278 25 1 -0.3634 0.8898 -0.5139 26 1 -0.3633 -0.8902 -0.5136 27 1 3.7310 3.2915 -0.0013 28 1 1.2979 4.7312 1.8708 29 1 2.9912 5.2572 2.0252 30 1 1.4326 7.1361 2.4599 31 1 0.7142 6.9133 0.8470 32 1 1.3581 9.2485 0.2363 33 1 2.9102 9.5044 2.8521 34 1 1.6749 10.6424 2.2623 35 1 1.2168 8.9786 2.6971 36 1 3.5611 9.7052 -0.8072 37 1 3.0445 11.0669 0.2165 38 1 4.2789 9.9286 0.8063 39 1 3.7763 7.8630 -1.0452 40 1 2.0824 7.3378 -1.2000 41 1 4.3591 5.6822 -0.0219 42 1 3.6401 5.4588 -1.6348 43 1 4.5890 1.2111 0.0048 44 1 5.3877 -1.5021 0.8917 45 1 5.0999 -1.5853 -1.9961 46 1 3.3079 -3.6693 -1.1875 47 1 5.3083 -4.3744 0.0049 48 1 1.9734 -2.0074 0.0003 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_9865296.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:09:15 Heat of formation + Delta-G solvation = -55.102921 kcal Electronic energy + Delta-G solvation = -25846.519395 eV Core-core repulsion = 22288.124895 eV Total energy + Delta-G solvation = -3558.394500 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.47183 -40.74122 -39.34639 -37.96458 -36.49020 -34.01851 -32.79961 -32.09794 -31.86394 -29.45001 -28.83481 -28.02402 -25.67215 -24.20283 -23.40433 -22.71339 -21.57368 -21.11850 -20.68927 -20.20183 -18.78141 -17.74326 -17.37684 -16.76852 -16.59532 -16.25757 -15.73215 -15.53873 -15.20919 -15.17559 -14.92911 -14.65739 -14.53809 -14.33569 -14.20126 -14.09250 -13.98868 -13.80900 -13.39401 -13.32642 -13.08892 -12.80460 -12.69977 -12.61858 -12.60779 -12.21140 -12.19425 -12.05534 -12.00200 -11.58869 -11.30247 -11.11512 -10.90859 -10.84715 -10.47762 -9.94301 -9.72574 -9.12703 -5.25248 0.81448 0.98317 1.28036 1.30835 1.70251 2.01030 2.51039 2.72737 3.18489 3.59427 3.71685 3.72239 3.82029 3.85199 4.04672 4.14006 4.21459 4.22269 4.35474 4.37327 4.40369 4.44831 4.50785 4.58039 4.60842 4.67840 4.71101 4.71330 4.78483 4.81051 4.84760 5.00231 5.00659 5.03152 5.07321 5.13199 5.18738 5.22938 5.24234 5.28601 5.33018 5.40750 5.43905 5.55699 5.63948 5.70752 5.76625 5.88254 6.23883 6.34204 6.79763 7.56013 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.123 3.877 3 C -0.241 4.241 4 C 0.593 3.407 5 O -0.549 6.549 6 N -0.725 5.725 7 C 0.148 3.852 8 H 0.087 0.913 9 C -0.128 4.128 10 C -0.113 4.113 11 C -0.083 4.083 12 H 0.070 0.930 13 C -0.093 4.093 14 C -0.151 4.151 15 C -0.150 4.150 16 C -0.112 4.112 17 C -0.126 4.126 18 C -0.128 4.128 19 C -0.028 4.028 20 C -0.040 4.040 21 O -0.522 6.522 22 Si 0.668 3.332 23 N -0.545 5.545 24 H 0.082 0.918 25 H 0.103 0.897 26 H 0.065 0.935 27 H 0.399 0.601 28 H 0.067 0.933 29 H 0.062 0.938 30 H 0.068 0.932 31 H 0.064 0.936 32 H 0.069 0.931 33 H 0.053 0.947 34 H 0.053 0.947 35 H 0.058 0.942 36 H 0.057 0.943 37 H 0.053 0.947 38 H 0.053 0.947 39 H 0.070 0.930 40 H 0.065 0.935 41 H 0.067 0.933 42 H 0.068 0.932 43 H 0.146 0.854 44 H 0.129 0.871 45 H 0.378 0.622 46 H -0.255 1.255 47 H -0.246 1.246 48 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.847 -1.730 1.257 2.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.005 3.995 3 C -0.250 4.250 4 C 0.383 3.617 5 O -0.428 6.428 6 N -0.375 5.375 7 C 0.044 3.956 8 H 0.105 0.895 9 C -0.166 4.166 10 C -0.151 4.151 11 C -0.102 4.102 12 H 0.089 0.911 13 C -0.111 4.111 14 C -0.208 4.208 15 C -0.208 4.208 16 C -0.150 4.150 17 C -0.164 4.164 18 C -0.153 4.153 19 C -0.136 4.136 20 C -0.151 4.151 21 O -0.328 6.328 22 Si 0.568 3.432 23 N -0.145 5.145 24 H 0.101 0.899 25 H 0.122 0.878 26 H 0.084 0.916 27 H 0.233 0.767 28 H 0.086 0.914 29 H 0.081 0.919 30 H 0.087 0.913 31 H 0.083 0.917 32 H 0.088 0.912 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.077 0.923 36 H 0.076 0.924 37 H 0.072 0.928 38 H 0.073 0.927 39 H 0.089 0.911 40 H 0.084 0.916 41 H 0.086 0.914 42 H 0.087 0.913 43 H 0.164 0.836 44 H 0.147 0.853 45 H 0.226 0.774 46 H -0.180 1.180 47 H -0.170 1.170 48 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges 0.451 -2.321 1.266 2.682 hybrid contribution 0.700 -0.119 -1.052 1.269 sum 1.151 -2.439 0.214 2.706 Atomic orbital electron populations 1.20651 0.86558 1.04500 1.03927 1.20410 0.93781 0.85261 1.00092 1.20145 0.92999 0.92135 1.19737 1.17310 0.85305 0.84004 0.75110 1.90746 1.16579 1.84374 1.51094 1.45855 1.09715 1.05776 1.76126 1.20965 0.98390 0.79459 0.96802 0.89466 1.21911 1.01774 0.96475 0.96479 1.21610 0.98378 0.93781 1.01362 1.21250 0.98768 0.93952 0.96213 0.91115 1.21144 0.98849 0.94263 0.96853 1.21905 1.01684 1.01050 0.96151 1.21909 0.98588 0.99432 1.00842 1.21589 1.01821 0.94746 0.96882 1.21801 0.98100 0.95325 1.01212 1.21791 0.95700 0.92567 1.05199 1.20461 0.84342 0.95623 1.13173 1.24361 0.92330 1.06639 0.91747 1.86649 1.39571 1.90919 1.15638 0.95640 0.84002 0.75121 0.88432 1.41711 1.05556 1.08459 1.58736 0.89935 0.87799 0.91582 0.76729 0.91383 0.91936 0.91347 0.91737 0.91221 0.92751 0.92815 0.92336 0.92389 0.92811 0.92748 0.91104 0.91637 0.91432 0.91335 0.83609 0.85339 0.77448 1.18000 1.16954 0.74770 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.00 9.88 36.01 0.36 0.35 16 2 C 0.12 0.13 7.17 -81.88 -0.59 -0.46 16 3 C -0.24 -0.55 6.29 -103.35 -0.65 -1.20 16 4 C 0.59 2.14 7.77 -12.59 -0.10 2.04 16 5 O -0.55 -3.53 14.47 5.26 0.08 -3.45 16 6 N -0.72 -0.82 5.07 -54.93 -0.28 -1.10 16 7 C 0.15 0.14 2.45 -67.93 -0.17 -0.03 16 8 H 0.09 0.26 7.58 -51.93 -0.39 -0.14 16 9 C -0.13 -0.12 5.49 -26.73 -0.15 -0.27 16 10 C -0.11 -0.01 4.85 -26.73 -0.13 -0.14 16 11 C -0.08 0.05 1.78 -90.62 -0.16 -0.11 16 12 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 13 C -0.09 0.04 2.51 -90.62 -0.23 -0.18 16 14 C -0.15 0.06 8.84 37.16 0.33 0.38 16 15 C -0.15 0.09 8.84 37.16 0.33 0.42 16 16 C -0.11 0.09 4.85 -26.76 -0.13 -0.04 16 17 C -0.13 0.10 5.39 -26.75 -0.14 -0.04 16 18 C -0.13 -0.09 10.43 -37.50 -0.39 -0.48 16 19 C -0.03 0.01 6.11 -81.87 -0.50 -0.49 16 20 C -0.04 0.06 2.98 36.00 0.11 0.17 16 21 O -0.52 0.00 12.87 -35.23 -0.45 -0.46 16 22 Si 0.67 -1.69 30.94 -169.99 -5.26 -6.95 16 23 N -0.55 0.55 5.41 -5.43 -0.03 0.52 16 24 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.10 0.22 6.47 -51.93 -0.34 -0.12 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.40 -0.33 7.73 -40.82 -0.32 -0.64 16 28 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 29 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 30 H 0.07 0.00 6.43 -51.93 -0.33 -0.33 16 31 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 33 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.06 -0.02 6.43 -51.93 -0.33 -0.35 16 36 H 0.06 -0.05 6.43 -51.93 -0.33 -0.38 16 37 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 38 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.07 -0.08 6.43 -51.93 -0.33 -0.42 16 40 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 41 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.15 -0.09 7.70 -52.48 -0.40 -0.50 16 44 H 0.13 -0.30 7.96 -51.93 -0.41 -0.71 16 45 H 0.38 -0.96 8.70 45.56 0.40 -0.56 16 46 H -0.26 0.18 7.11 56.52 0.40 0.58 16 47 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 48 H 0.41 -1.45 6.70 -40.82 -0.27 -1.72 16 LS Contribution 371.15 15.07 5.59 5.59 Total: 0.00 -6.35 371.15 -10.76 -17.10 By element: Atomic # 1 Polarization: -3.01 SS G_CDS: -8.19 Total: -11.20 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -2.21 Total: -0.07 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -0.31 Total: -0.58 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -0.38 Total: -3.91 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.26 Total: -6.95 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -6.35 -10.76 -17.10 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_9865296.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.001 kcal (2) G-P(sol) polarization free energy of solvation -6.346 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.755 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.102 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds