Wall clock time and date at job start Sun Mar 7 2021 02:27:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45194 * 109.47339 * 2 1 4 4 C 1.34235 * 117.00385 * 179.97438 * 3 2 1 5 5 O 1.20824 * 119.99671 * 0.02562 * 4 3 2 6 6 C 1.50693 * 120.00281 * 180.02562 * 4 3 2 7 7 H 1.09000 * 109.47089 * 60.00096 * 6 4 3 8 8 C 1.53003 * 109.47172 * 180.02562 * 6 4 3 9 9 C 1.53003 * 109.47203 * 180.02562 * 8 6 4 10 10 C 1.53000 * 109.46720 * 299.99834 * 9 8 6 11 11 H 1.09000 * 109.47115 * 300.00085 * 10 9 8 12 12 N 1.46503 * 109.47291 * 180.02562 * 10 9 8 13 13 C 1.34769 * 119.99878 * 154.99668 * 12 10 9 14 14 O 1.21696 * 120.00570 * 0.02562 * 13 12 10 15 15 C 1.46680 * 119.99716 * 180.02562 * 13 12 10 16 16 C 1.37876 * 126.23668 * 179.71853 * 15 13 12 17 17 C 1.39829 * 107.08527 * 179.84772 * 16 15 13 18 18 C 1.50708 * 126.06473 * 180.14054 * 17 16 15 19 19 O 1.42892 * 109.47238 * 65.29948 * 18 17 16 20 20 Si 1.86304 * 109.47117 * 185.30296 * 18 17 16 21 21 C 1.35449 * 107.87127 * 0.41418 * 17 16 15 22 22 N 1.35532 * 108.86669 * 359.74196 * 21 17 16 23 23 C 1.52998 * 109.47209 * 59.99795 * 10 9 8 24 24 C 1.52999 * 109.47707 * 299.99984 * 23 10 9 25 25 H 1.09002 * 109.47153 * 59.99705 * 1 2 3 26 26 H 1.09001 * 109.46832 * 299.99896 * 1 2 3 27 27 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.47153 * 120.00295 * 2 1 3 29 29 H 1.08998 * 109.47533 * 239.99925 * 2 1 3 30 30 H 1.09003 * 109.46860 * 300.00215 * 8 6 4 31 31 H 1.09000 * 109.47151 * 59.99992 * 8 6 4 32 32 H 1.09000 * 109.47397 * 59.99747 * 9 8 6 33 33 H 1.08994 * 109.47204 * 180.02562 * 9 8 6 34 34 H 0.96998 * 119.99446 * 335.00482 * 12 10 9 35 35 H 1.08000 * 126.45075 * 359.96070 * 16 15 13 36 36 H 1.08998 * 109.46785 * 305.29891 * 18 17 16 37 37 H 0.96698 * 113.99892 * 180.02562 * 19 18 17 38 38 H 1.48494 * 109.99823 * 178.67720 * 20 18 17 39 39 H 1.48503 * 109.99947 * 299.99971 * 20 18 17 40 40 H 1.07999 * 125.56792 * 179.77783 * 21 17 16 41 41 H 0.97004 * 125.67886 * 179.97438 * 22 21 17 42 42 H 1.08997 * 109.47102 * 60.00571 * 23 10 9 43 43 H 1.09003 * 109.46921 * 179.97438 * 23 10 9 44 44 H 1.09000 * 109.47083 * 299.99995 * 24 23 10 45 45 H 1.08998 * 109.47227 * 179.97438 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9373 0.0012 7 1 3.5845 3.4692 0.8912 8 6 5.4487 2.8572 0.0010 9 6 6.0336 4.2711 0.0023 10 6 5.5620 5.0191 -1.2463 11 1 5.8979 4.4877 -2.1367 12 7 6.1224 6.3727 -1.2455 13 6 6.2859 7.0349 -2.4078 14 8 5.9677 6.5088 -3.4580 15 6 6.8476 8.3899 -2.4070 16 6 7.0747 9.1787 -3.5148 17 6 7.6122 10.3855 -3.0567 18 6 8.0165 11.5583 -3.9125 19 8 6.8585 12.1106 -4.5416 20 14 8.8228 12.8562 -2.8465 21 6 7.7108 10.3111 -1.7079 22 7 7.2494 9.1036 -1.3006 23 6 4.0341 5.0991 -1.2462 24 6 3.4492 3.6853 -1.2474 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 1.8933 -0.5139 0.8900 29 1 1.8934 -0.5138 -0.8899 30 1 5.7847 2.3246 0.8908 31 1 5.7846 2.3255 -0.8892 32 1 5.6977 4.8025 0.8928 33 1 7.1220 4.2140 0.0018 34 1 6.3758 6.7921 -0.4084 35 1 6.8734 8.9148 -4.5426 36 1 8.7206 11.2258 -4.6752 37 1 7.0443 12.8708 -5.1096 38 1 9.2548 14.0042 -3.6835 39 1 7.8730 13.3177 -1.8024 40 1 8.0938 11.0875 -1.0622 41 1 7.2094 8.7936 -0.3823 42 1 3.6981 5.6305 -0.3559 43 1 3.6982 5.6324 -2.1356 44 1 3.7851 3.1539 -2.1379 45 1 2.3607 3.7424 -1.2469 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_10543058.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:27:10 Heat of formation + Delta-G solvation = -119.152620 kcal Electronic energy + Delta-G solvation = -26957.212455 eV Core-core repulsion = 22941.525265 eV Total energy + Delta-G solvation = -4015.687190 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.161 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.45448 -41.74179 -40.55540 -38.91362 -37.72045 -37.51655 -35.38857 -32.93064 -32.64195 -31.94826 -31.36687 -30.22724 -26.64158 -25.59590 -24.19780 -23.93174 -23.24802 -21.89126 -21.32321 -20.98639 -20.43586 -19.67188 -18.63368 -18.40405 -17.68444 -17.56499 -17.17601 -17.05436 -16.31842 -15.84335 -15.68110 -15.39727 -15.05069 -14.97666 -14.83117 -14.68274 -14.49994 -14.41517 -14.10172 -13.92447 -13.84060 -13.56586 -13.35419 -13.30361 -12.92188 -12.81544 -12.54547 -12.52165 -12.44794 -12.32393 -11.91679 -11.71186 -11.50282 -11.47608 -11.29472 -11.01841 -10.38735 -10.19105 -9.90170 -9.26455 -4.97042 0.44915 1.22729 1.30523 1.54978 1.60012 1.64902 1.93578 1.99803 2.04330 2.40981 3.41153 3.44710 3.49442 3.56059 3.78521 3.85554 3.95667 3.96154 3.96990 4.00149 4.08526 4.09710 4.16133 4.23145 4.29245 4.29719 4.30382 4.50904 4.61214 4.64956 4.73252 4.80581 4.84099 4.88401 4.93179 4.98707 5.01358 5.04322 5.08951 5.14933 5.18873 5.37068 5.50449 5.64032 5.82739 6.23408 6.43861 6.56380 6.78035 7.15347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.101 4.101 9 C -0.125 4.125 10 C 0.143 3.857 11 H 0.095 0.905 12 N -0.730 5.730 13 C 0.592 3.408 14 O -0.523 6.523 15 C -0.060 4.060 16 C -0.074 4.074 17 C -0.165 4.165 18 C -0.041 4.041 19 O -0.536 6.536 20 Si 0.680 3.320 21 C 0.038 3.962 22 N -0.535 5.535 23 C -0.128 4.128 24 C -0.108 4.108 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.080 0.920 31 H 0.078 0.922 32 H 0.072 0.928 33 H 0.078 0.922 34 H 0.394 0.606 35 H 0.150 0.850 36 H 0.073 0.927 37 H 0.377 0.623 38 H -0.262 1.262 39 H -0.256 1.256 40 H 0.176 0.824 41 H 0.418 0.582 42 H 0.069 0.931 43 H 0.077 0.923 44 H 0.073 0.927 45 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.864 2.075 5.219 5.917 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.139 4.139 9 C -0.163 4.163 10 C 0.039 3.961 11 H 0.113 0.887 12 N -0.380 5.380 13 C 0.380 3.620 14 O -0.398 6.398 15 C -0.172 4.172 16 C -0.101 4.101 17 C -0.172 4.172 18 C -0.151 4.151 19 O -0.343 6.343 20 Si 0.581 3.419 21 C -0.098 4.098 22 N -0.131 5.131 23 C -0.167 4.167 24 C -0.146 4.146 25 H 0.087 0.913 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.099 0.901 31 H 0.097 0.903 32 H 0.091 0.909 33 H 0.097 0.903 34 H 0.227 0.773 35 H 0.167 0.833 36 H 0.091 0.909 37 H 0.225 0.775 38 H -0.187 1.187 39 H -0.180 1.180 40 H 0.193 0.807 41 H 0.256 0.744 42 H 0.088 0.912 43 H 0.096 0.904 44 H 0.092 0.908 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.476 1.594 5.201 5.636 hybrid contribution -0.547 0.403 -0.037 0.680 sum 0.929 1.997 5.164 5.614 Atomic orbital electron populations 1.21821 0.92341 1.03255 1.03649 1.23076 0.95592 0.79887 1.02730 1.86505 1.24426 1.32714 1.83771 1.23725 0.80691 0.92595 0.72202 1.90688 1.60462 1.43152 1.45005 1.21174 0.96677 0.89859 1.02272 0.87124 1.21391 0.91560 0.96381 1.04545 1.21818 1.01556 0.95603 0.97327 1.21085 0.93185 0.81863 0.99945 0.88727 1.45931 1.66078 1.17470 1.08564 1.17033 0.77611 0.83423 0.83947 1.90879 1.50398 1.67461 1.31058 1.20385 1.14457 0.94955 0.87364 1.21208 0.98905 0.91957 0.97989 1.18693 1.10043 0.96021 0.92419 1.24058 0.91483 0.99454 1.00135 1.86619 1.32304 1.50109 1.65273 0.95446 0.85491 0.79293 0.81642 1.21796 1.03647 0.88940 0.95448 1.41872 1.48985 1.13638 1.08644 1.21928 0.94692 0.96626 1.03411 1.21495 1.01798 0.95224 0.96108 0.91346 0.91394 0.90020 0.91143 0.91098 0.90138 0.90314 0.90936 0.90297 0.77281 0.83274 0.90873 0.77538 1.18713 1.18015 0.80716 0.74391 0.91240 0.90395 0.90817 0.89872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.22 10.29 37.16 0.38 0.60 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.61 10.12 -39.27 -0.40 -1.01 16 4 C 0.47 0.92 7.26 36.00 0.26 1.18 16 5 O -0.51 -2.46 15.73 -18.75 -0.29 -2.76 16 6 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 7 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 8 C -0.10 0.13 4.49 -26.73 -0.12 0.01 16 9 C -0.13 0.37 5.39 -26.73 -0.14 0.23 16 10 C 0.14 -0.16 2.45 -67.93 -0.17 -0.33 16 11 H 0.09 0.10 7.58 -51.93 -0.39 -0.29 16 12 N -0.73 1.04 5.07 -55.11 -0.28 0.76 16 13 C 0.59 1.32 7.75 -12.86 -0.10 1.22 16 14 O -0.52 -3.29 16.55 5.19 0.09 -3.20 16 15 C -0.06 -0.08 7.06 -81.98 -0.58 -0.66 16 16 C -0.07 -0.21 10.59 -39.12 -0.41 -0.63 16 17 C -0.17 -0.20 5.46 -105.02 -0.57 -0.77 16 18 C -0.04 -0.01 3.01 36.01 0.11 0.10 16 19 O -0.54 -1.00 12.86 -35.23 -0.45 -1.45 16 20 Si 0.68 -1.08 30.60 -169.99 -5.20 -6.28 16 21 C 0.04 -0.05 10.45 -16.91 -0.18 -0.23 16 22 N -0.54 1.11 5.99 -9.39 -0.06 1.06 16 23 C -0.13 0.14 5.50 -26.73 -0.15 -0.01 16 24 C -0.11 0.11 5.14 -26.73 -0.14 -0.02 16 25 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 29 H 0.07 0.05 8.13 -51.93 -0.42 -0.38 16 30 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 31 H 0.08 0.00 8.10 -51.93 -0.42 -0.42 16 32 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 33 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 34 H 0.39 -1.78 7.73 -40.82 -0.32 -2.10 16 35 H 0.15 0.54 8.06 -52.49 -0.42 0.12 16 36 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 37 H 0.38 -0.83 8.74 45.56 0.40 -0.43 16 38 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 39 H -0.26 -0.29 7.11 56.52 0.40 0.12 16 40 H 0.18 -0.73 6.21 -52.49 -0.33 -1.06 16 41 H 0.42 -2.40 8.19 -40.82 -0.33 -2.73 16 42 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 43 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 44 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 45 H 0.08 -0.09 8.11 -51.93 -0.42 -0.51 16 LS Contribution 373.11 15.07 5.62 5.62 Total: 0.00 -10.80 373.11 -9.71 -20.51 By element: Atomic # 1 Polarization: -7.13 SS G_CDS: -6.92 Total: -14.05 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: -1.82 Total: 0.80 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -0.34 Total: 1.81 kcal Atomic # 8 Polarization: -7.36 SS G_CDS: -1.06 Total: -8.42 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.20 Total: -6.28 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -10.80 -9.71 -20.51 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_10543058.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.642 kcal (2) G-P(sol) polarization free energy of solvation -10.803 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.444 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.511 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.153 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds