Wall clock time and date at job start Sun Mar 7 2021 02:27:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45193 * 109.46902 * 2 1 4 4 C 1.34238 * 116.99811 * 179.97438 * 3 2 1 5 5 O 1.20825 * 119.99570 * 0.02562 * 4 3 2 6 6 C 1.50696 * 119.99784 * 179.72330 * 4 3 2 7 7 H 1.09007 * 109.47211 * 60.27766 * 6 4 3 8 8 C 1.53009 * 109.46899 * 180.27434 * 6 4 3 9 9 C 1.53004 * 109.46930 * 180.02562 * 8 6 4 10 10 C 1.53001 * 109.47272 * 300.00051 * 9 8 6 11 11 H 1.08999 * 109.46888 * 300.00275 * 10 9 8 12 12 N 1.46500 * 109.47107 * 180.02562 * 10 9 8 13 13 C 1.34775 * 119.99612 * 154.99986 * 12 10 9 14 14 O 1.21689 * 120.00238 * 354.41399 * 13 12 10 15 15 C 1.46681 * 119.99416 * 174.41293 * 13 12 10 16 16 C 1.37871 * 126.23529 * 4.72411 * 15 13 12 17 17 C 1.39834 * 107.08570 * 179.97438 * 16 15 13 18 18 C 1.50700 * 126.06808 * 180.02562 * 17 16 15 19 19 O 1.42899 * 109.47016 * 299.99205 * 18 17 16 20 20 Si 1.86303 * 109.47022 * 179.97438 * 18 17 16 21 21 C 1.35457 * 107.86526 * 359.97438 * 17 16 15 22 22 N 1.35539 * 108.86998 * 359.77463 * 21 17 16 23 23 C 1.46500 * 125.67603 * 180.26302 * 22 21 17 24 24 C 1.53002 * 109.46727 * 60.00051 * 10 9 8 25 25 C 1.52999 * 109.47541 * 299.99598 * 24 10 9 26 26 H 1.09004 * 109.47035 * 60.00196 * 1 2 3 27 27 H 1.09003 * 109.47228 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47723 * 300.00361 * 1 2 3 29 29 H 1.09005 * 109.47140 * 239.99606 * 2 1 3 30 30 H 1.09005 * 109.46605 * 120.00124 * 2 1 3 31 31 H 1.08995 * 109.46831 * 300.00414 * 8 6 4 32 32 H 1.08993 * 109.46787 * 60.00210 * 8 6 4 33 33 H 1.09000 * 109.46610 * 60.00515 * 9 8 6 34 34 H 1.09002 * 109.46754 * 180.02562 * 9 8 6 35 35 H 0.97000 * 119.99702 * 335.00337 * 12 10 9 36 36 H 1.07998 * 126.45884 * 359.97438 * 16 15 13 37 37 H 1.08998 * 109.47046 * 59.99825 * 18 17 16 38 38 H 0.96694 * 114.00031 * 300.00284 * 19 18 17 39 39 H 1.48498 * 110.00190 * 58.67784 * 20 18 17 40 40 H 1.48504 * 110.00035 * 179.97438 * 20 18 17 41 41 H 1.07995 * 125.56445 * 179.97438 * 21 17 16 42 42 H 1.09006 * 109.46911 * 270.86854 * 23 22 21 43 43 H 1.08997 * 109.47345 * 30.87156 * 23 22 21 44 44 H 1.09002 * 109.46923 * 150.87087 * 23 22 21 45 45 H 1.08999 * 109.47253 * 60.00448 * 24 10 9 46 46 H 1.09008 * 109.46919 * 179.97438 * 24 10 9 47 47 H 1.08999 * 109.47541 * 300.00673 * 25 24 10 48 48 H 1.09002 * 109.47092 * 180.02562 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9374 -0.0057 7 1 3.5878 3.4723 0.8838 8 6 5.4487 2.8573 -0.0106 9 6 6.0334 4.2711 -0.0164 10 6 5.5577 5.0148 -1.2660 11 1 5.8906 4.4802 -2.1556 12 7 6.1181 6.3683 -1.2717 13 6 6.2777 7.0266 -2.4369 14 8 6.0526 6.4614 -3.4908 15 6 6.7228 8.4242 -2.4346 16 6 7.0998 9.1576 -1.3296 17 6 7.4477 10.4339 -1.7828 18 6 7.9243 11.5797 -0.9277 19 8 6.9195 11.9060 0.0345 20 14 8.2574 13.0623 -2.0056 21 6 7.2813 10.4573 -3.1269 22 7 6.8463 9.2406 -3.5360 23 6 6.5534 8.8588 -4.9197 24 6 4.0298 5.0948 -1.2610 25 6 3.4449 3.6810 -1.2554 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 1.8934 -0.5139 -0.8900 30 1 1.8933 -0.5139 0.8900 31 1 5.7875 2.3278 0.8798 32 1 5.7815 2.3224 -0.9001 33 1 5.7005 4.8055 0.8734 34 1 7.1219 4.2140 -0.0203 35 1 6.3743 6.7907 -0.4369 36 1 7.1223 8.8116 -0.3068 37 1 8.8408 11.2920 -0.4128 38 1 6.0747 12.1718 -0.3537 39 1 7.0237 13.4452 -2.7381 40 1 8.7275 14.1994 -1.1742 41 1 7.4682 11.3058 -3.7683 42 1 5.5115 9.0856 -5.1464 43 1 7.2019 9.4162 -5.5955 44 1 6.7286 7.7905 -5.0467 45 1 3.6968 5.6293 -0.3713 46 1 3.6908 5.6250 -2.1511 47 1 3.7779 3.1465 -2.1450 48 1 2.3564 3.7381 -1.2523 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_10803934.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:27:14 Heat of formation + Delta-G solvation = -116.124425 kcal Electronic energy + Delta-G solvation = -29303.916694 eV Core-core repulsion = 25132.823197 eV Total energy + Delta-G solvation = -4171.093497 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.56214 -41.73619 -40.55782 -38.91953 -37.81240 -37.49878 -35.45402 -33.89857 -32.79991 -31.93072 -31.72612 -30.10608 -28.33681 -25.95456 -25.47782 -24.11341 -23.90383 -23.14533 -21.87813 -21.26146 -20.99828 -20.31883 -18.90186 -18.61301 -17.77957 -17.62256 -17.53147 -17.10332 -16.82708 -16.66203 -15.97377 -15.83735 -15.58625 -15.42546 -15.15981 -14.96917 -14.90757 -14.54362 -14.36548 -14.17196 -13.99321 -13.84976 -13.57323 -13.52238 -13.36041 -13.26970 -13.18811 -12.91549 -12.77434 -12.52817 -12.43614 -12.37319 -12.29768 -11.78256 -11.69093 -11.49271 -11.45627 -11.26011 -10.98317 -10.47454 -10.14026 -9.69698 -9.26663 -4.94979 0.44334 1.23591 1.31540 1.53384 1.56263 1.62878 1.67777 2.00266 2.28540 2.37478 3.42978 3.46082 3.48040 3.56253 3.72592 3.78720 3.85140 3.91252 3.96347 3.98506 4.00571 4.11003 4.16830 4.19787 4.25119 4.26263 4.29889 4.32531 4.35926 4.53768 4.63663 4.65400 4.70390 4.73879 4.76884 4.80573 4.86263 4.92558 4.99818 5.00582 5.04287 5.14199 5.16453 5.22423 5.41866 5.51150 5.66183 5.89284 6.10975 6.45216 6.51601 6.78928 7.17032 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.112 0.888 8 C -0.100 4.100 9 C -0.126 4.126 10 C 0.144 3.856 11 H 0.094 0.906 12 N -0.716 5.716 13 C 0.593 3.407 14 O -0.546 6.546 15 C -0.054 4.054 16 C -0.113 4.113 17 C -0.206 4.206 18 C -0.037 4.037 19 O -0.532 6.532 20 Si 0.679 3.321 21 C 0.027 3.973 22 N -0.404 5.404 23 C 0.061 3.939 24 C -0.127 4.127 25 C -0.107 4.107 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.067 0.933 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.080 0.920 32 H 0.077 0.923 33 H 0.074 0.926 34 H 0.079 0.921 35 H 0.404 0.596 36 H 0.145 0.855 37 H 0.115 0.885 38 H 0.374 0.626 39 H -0.261 1.261 40 H -0.258 1.258 41 H 0.173 0.827 42 H 0.077 0.923 43 H 0.087 0.913 44 H 0.107 0.893 45 H 0.071 0.929 46 H 0.074 0.926 47 H 0.072 0.928 48 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.536 1.623 -0.523 1.787 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.130 0.870 8 C -0.139 4.139 9 C -0.164 4.164 10 C 0.040 3.960 11 H 0.112 0.888 12 N -0.367 5.367 13 C 0.381 3.619 14 O -0.425 6.425 15 C -0.167 4.167 16 C -0.139 4.139 17 C -0.213 4.213 18 C -0.148 4.148 19 O -0.338 6.338 20 Si 0.580 3.420 21 C -0.109 4.109 22 N -0.076 5.076 23 C -0.080 4.080 24 C -0.166 4.166 25 C -0.146 4.146 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.086 0.914 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.099 0.901 32 H 0.096 0.904 33 H 0.093 0.907 34 H 0.098 0.902 35 H 0.239 0.761 36 H 0.163 0.837 37 H 0.133 0.867 38 H 0.222 0.778 39 H -0.185 1.185 40 H -0.183 1.183 41 H 0.190 0.810 42 H 0.096 0.904 43 H 0.105 0.895 44 H 0.126 0.874 45 H 0.090 0.910 46 H 0.093 0.907 47 H 0.091 0.909 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.339 1.435 -1.431 2.055 hybrid contribution -1.044 -0.002 0.829 1.333 sum -1.382 1.433 -0.602 2.080 Atomic orbital electron populations 1.21821 0.92357 1.03244 1.03638 1.23075 0.95578 0.79914 1.02725 1.86506 1.24450 1.32684 1.83789 1.23738 0.80674 0.92613 0.72195 1.90688 1.60462 1.43150 1.44995 1.21180 0.96724 0.89837 1.02261 0.87043 1.21392 0.91494 0.96454 1.04516 1.21821 1.01660 0.95500 0.97384 1.21078 0.93013 0.81883 1.00005 0.88784 1.45685 1.65166 1.17051 1.08759 1.16959 0.76706 0.84168 0.84041 1.90793 1.52108 1.68842 1.30779 1.20035 1.16252 0.93212 0.87245 1.21180 1.02475 0.93102 0.97121 1.19732 1.11308 0.97100 0.93126 1.24267 0.93506 1.01370 0.95634 1.86582 1.24597 1.88366 1.34226 0.95378 0.86465 0.77527 0.82610 1.21868 1.04618 0.88841 0.95592 1.43818 1.47246 1.09349 1.07142 1.22396 1.02526 1.04826 0.78249 1.21930 0.94745 0.96583 1.03337 1.21487 1.01724 0.95248 0.96104 0.91377 0.90032 0.91380 0.91122 0.91130 0.90106 0.90391 0.90734 0.90190 0.76114 0.83702 0.86747 0.77833 1.18531 1.18291 0.80999 0.90437 0.89467 0.87407 0.91037 0.90722 0.90913 0.89911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.61 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.60 10.12 -39.28 -0.40 -1.00 16 4 C 0.47 0.93 7.26 36.00 0.26 1.19 16 5 O -0.51 -2.49 15.73 -18.75 -0.29 -2.78 16 6 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 7 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 8 C -0.10 0.11 4.49 -26.72 -0.12 -0.01 16 9 C -0.13 0.32 5.39 -26.73 -0.14 0.17 16 10 C 0.14 -0.14 2.50 -67.93 -0.17 -0.31 16 11 H 0.09 0.10 7.50 -51.93 -0.39 -0.29 16 12 N -0.72 0.57 5.06 -55.11 -0.28 0.29 16 13 C 0.59 1.19 7.74 -12.85 -0.10 1.09 16 14 O -0.55 -2.62 14.26 5.20 0.07 -2.54 16 15 C -0.05 -0.08 6.89 -81.98 -0.56 -0.64 16 16 C -0.11 -0.04 10.29 -39.12 -0.40 -0.45 16 17 C -0.21 -0.01 5.44 -105.02 -0.57 -0.58 16 18 C -0.04 0.02 3.02 36.01 0.11 0.13 16 19 O -0.53 -0.55 12.88 -35.23 -0.45 -1.00 16 20 Si 0.68 -0.94 30.59 -169.99 -5.20 -6.14 16 21 C 0.03 -0.01 9.94 -16.91 -0.17 -0.18 16 22 N -0.40 -0.29 3.16 -120.23 -0.38 -0.67 16 23 C 0.06 -0.06 10.65 59.85 0.64 0.58 16 24 C -0.13 0.16 5.50 -26.73 -0.15 0.01 16 25 C -0.11 0.13 5.13 -26.73 -0.14 -0.01 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 30 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 31 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 32 H 0.08 0.01 8.10 -51.93 -0.42 -0.41 16 33 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 34 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 35 H 0.40 -1.18 7.50 -40.82 -0.31 -1.48 16 36 H 0.15 -0.19 7.45 -52.49 -0.39 -0.58 16 37 H 0.11 -0.11 7.96 -51.93 -0.41 -0.53 16 38 H 0.37 -0.59 8.70 45.56 0.40 -0.20 16 39 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 40 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 41 H 0.17 -0.55 6.19 -52.49 -0.32 -0.87 16 42 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 44 H 0.11 0.09 6.19 -51.93 -0.32 -0.24 16 45 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 46 H 0.07 0.04 8.14 -51.92 -0.42 -0.39 16 47 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 48 H 0.08 -0.11 8.11 -51.93 -0.42 -0.53 16 LS Contribution 390.99 15.07 5.89 5.89 Total: 0.00 -8.99 390.99 -9.89 -18.88 By element: Atomic # 1 Polarization: -4.92 SS G_CDS: -7.70 Total: -12.63 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -1.14 Total: 1.70 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.66 Total: -0.37 kcal Atomic # 8 Polarization: -6.25 SS G_CDS: -1.07 Total: -7.33 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.20 Total: -6.14 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -8.99 -9.89 -18.88 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_10803934.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.249 kcal (2) G-P(sol) polarization free energy of solvation -8.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.236 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.888 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.875 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds