Wall clock time and date at job start Sun Mar 7 2021 02:27:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45199 * 109.47323 * 2 1 4 4 C 1.34232 * 116.99925 * 179.97438 * 3 2 1 5 5 O 1.20822 * 119.99906 * 0.02562 * 4 3 2 6 6 C 1.50696 * 119.99767 * 180.02562 * 4 3 2 7 7 H 1.09000 * 109.47201 * 60.00382 * 6 4 3 8 8 C 1.53005 * 109.46754 * 180.02562 * 6 4 3 9 9 C 1.53001 * 109.47011 * 179.97438 * 8 6 4 10 10 C 1.52999 * 109.47214 * 300.00065 * 9 8 6 11 11 H 1.09000 * 109.47157 * 300.00015 * 10 9 8 12 12 N 1.46508 * 109.47153 * 179.97438 * 10 9 8 13 13 C 1.34770 * 119.99684 * 155.27812 * 12 10 9 14 14 O 1.21696 * 120.00238 * 354.84734 * 13 12 10 15 15 C 1.46678 * 119.99801 * 174.85098 * 13 12 10 16 16 C 1.37868 * 126.23546 * 4.97975 * 15 13 12 17 17 C 1.39839 * 107.08617 * 180.02562 * 16 15 13 18 18 C 1.35443 * 107.86472 * 0.02562 * 17 16 15 19 19 C 1.50704 * 125.56336 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.47249 * 209.97413 * 19 18 17 21 21 Si 1.86300 * 109.46894 * 329.96975 * 19 18 17 22 22 N 1.35535 * 108.87700 * 359.72841 * 18 17 16 23 23 C 1.46497 * 125.68339 * 180.30408 * 22 18 17 24 24 C 1.53005 * 109.47184 * 60.00041 * 10 9 8 25 25 C 1.52999 * 109.47342 * 300.00156 * 6 4 3 26 26 H 1.08995 * 109.47449 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.46822 * 299.99700 * 1 2 3 28 28 H 1.09004 * 109.47065 * 59.99191 * 1 2 3 29 29 H 1.09002 * 109.46822 * 240.00300 * 2 1 3 30 30 H 1.08997 * 109.47351 * 120.00558 * 2 1 3 31 31 H 1.09000 * 109.47095 * 60.00146 * 8 6 4 32 32 H 1.08994 * 109.47419 * 299.99877 * 8 6 4 33 33 H 1.08994 * 109.47373 * 179.97438 * 9 8 6 34 34 H 1.09000 * 109.47071 * 60.00133 * 9 8 6 35 35 H 0.96991 * 120.00091 * 335.00030 * 12 10 9 36 36 H 1.07997 * 126.45311 * 0.03801 * 16 15 13 37 37 H 1.08004 * 126.06362 * 180.02562 * 17 16 15 38 38 H 1.08996 * 109.47402 * 89.97144 * 19 18 17 39 39 H 0.96694 * 114.00347 * 179.97438 * 20 19 18 40 40 H 1.48498 * 110.00106 * 300.00180 * 21 19 18 41 41 H 1.48500 * 109.99865 * 61.32345 * 21 19 18 42 42 H 1.08997 * 109.47403 * 275.05282 * 23 22 18 43 43 H 1.08995 * 109.47097 * 35.05310 * 23 22 18 44 44 H 1.08997 * 109.47003 * 155.05435 * 23 22 18 45 45 H 1.09000 * 109.47095 * 59.99936 * 24 10 9 46 46 H 1.09002 * 109.47153 * 179.97438 * 24 10 9 47 47 H 1.09000 * 109.47157 * 300.00252 * 25 6 4 48 48 H 1.08994 * 109.47074 * 59.99903 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9208 2.9373 0.0012 7 1 3.5846 3.4692 0.8912 8 6 5.4487 2.8571 0.0010 9 6 6.0336 4.2709 0.0010 10 6 5.5620 5.0179 -1.2481 11 1 5.8978 4.4858 -2.1382 12 7 6.1216 6.3719 -1.2478 13 6 6.2798 7.0358 -2.4099 14 8 6.0467 6.4780 -3.4661 15 6 6.7332 8.4308 -2.4017 16 6 7.1243 9.1541 -1.2951 17 6 7.4746 10.4319 -1.7422 18 6 7.2949 10.4663 -3.0843 19 6 7.5543 11.6553 -3.9731 20 8 6.6678 11.6151 -5.0933 21 14 7.2677 13.2244 -3.0106 22 7 6.8500 9.2548 -3.4983 23 6 6.5422 8.8847 -4.8819 24 6 4.0341 5.0981 -1.2480 25 6 3.4497 3.6847 -1.2480 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5140 -0.8899 29 1 1.8933 -0.5138 -0.8900 30 1 1.8934 -0.5139 0.8899 31 1 5.7846 2.3254 -0.8892 32 1 5.7847 2.3246 0.8907 33 1 7.1221 4.2138 0.0014 34 1 5.6978 4.8030 0.8911 35 1 6.3743 6.7920 -0.4110 36 1 7.1545 8.8003 -0.2752 37 1 7.8262 11.2467 -1.1266 38 1 8.5856 11.6280 -4.3248 39 1 6.7785 12.3522 -5.7092 40 1 5.8650 13.2737 -2.5255 41 1 8.2054 13.2935 -1.8611 42 1 5.5222 9.1858 -5.1202 43 1 7.2362 9.3874 -5.5554 44 1 6.6392 7.8054 -4.9994 45 1 3.6982 5.6302 -0.3580 46 1 3.6981 5.6307 -2.1378 47 1 3.7859 3.1528 -2.1380 48 1 2.3612 3.7417 -1.2484 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_10803936.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:27:19 Heat of formation + Delta-G solvation = -115.808694 kcal Electronic energy + Delta-G solvation = -29408.518417 eV Core-core repulsion = 25237.438611 eV Total energy + Delta-G solvation = -4171.079806 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.55154 -41.73200 -40.55636 -38.90934 -37.76829 -37.49764 -35.44094 -33.74656 -32.79575 -31.94162 -31.91943 -30.53713 -27.41211 -26.93899 -25.27763 -23.92385 -23.77674 -22.93930 -21.94037 -21.36140 -20.97403 -20.14784 -18.79231 -18.58100 -18.43232 -17.59271 -17.53605 -17.17414 -16.94893 -16.60184 -15.98969 -15.76724 -15.41715 -15.34033 -14.96023 -14.88581 -14.80421 -14.52949 -14.33683 -14.17362 -13.83942 -13.82405 -13.61882 -13.55580 -13.35213 -13.19557 -13.00128 -12.90610 -12.74855 -12.72426 -12.51550 -12.42304 -12.28806 -11.93145 -11.68253 -11.48640 -11.44749 -11.24310 -10.91595 -10.64462 -10.11761 -9.73631 -9.06912 -5.05352 0.43705 1.09712 1.24273 1.55464 1.64241 1.69094 1.73377 2.02113 2.37612 2.41795 3.07652 3.43818 3.47867 3.57235 3.67176 3.78317 3.86702 3.96909 3.99264 4.00430 4.01352 4.11978 4.20336 4.25538 4.26685 4.30461 4.33335 4.35363 4.49666 4.55071 4.55885 4.64553 4.74498 4.81154 4.85415 4.88821 4.92961 4.95618 5.00635 5.02042 5.05261 5.10623 5.16187 5.23306 5.44227 5.51794 5.70697 6.00424 6.16105 6.41854 6.48097 6.79504 7.19937 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.112 0.888 8 C -0.100 4.100 9 C -0.125 4.125 10 C 0.144 3.856 11 H 0.094 0.906 12 N -0.716 5.716 13 C 0.594 3.406 14 O -0.544 6.544 15 C -0.052 4.052 16 C -0.134 4.134 17 C -0.213 4.213 18 C 0.061 3.939 19 C -0.054 4.054 20 O -0.551 6.551 21 Si 0.716 3.284 22 N -0.386 5.386 23 C 0.072 3.928 24 C -0.128 4.128 25 C -0.108 4.108 26 H 0.081 0.919 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.077 0.923 32 H 0.080 0.920 33 H 0.079 0.921 34 H 0.074 0.926 35 H 0.403 0.597 36 H 0.148 0.852 37 H 0.144 0.856 38 H 0.081 0.919 39 H 0.388 0.612 40 H -0.253 1.253 41 H -0.253 1.253 42 H 0.077 0.923 43 H 0.087 0.913 44 H 0.102 0.898 45 H 0.071 0.929 46 H 0.075 0.925 47 H 0.072 0.928 48 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.024 4.864 0.590 4.900 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.130 0.870 8 C -0.139 4.139 9 C -0.163 4.163 10 C 0.040 3.960 11 H 0.112 0.888 12 N -0.367 5.367 13 C 0.382 3.618 14 O -0.423 6.423 15 C -0.167 4.167 16 C -0.161 4.161 17 C -0.237 4.237 18 C -0.058 4.058 19 C -0.163 4.163 20 O -0.358 6.358 21 Si 0.615 3.385 22 N -0.057 5.057 23 C -0.069 4.069 24 C -0.166 4.166 25 C -0.146 4.146 26 H 0.100 0.900 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.096 0.904 32 H 0.099 0.901 33 H 0.098 0.902 34 H 0.092 0.908 35 H 0.238 0.762 36 H 0.165 0.835 37 H 0.162 0.838 38 H 0.098 0.902 39 H 0.236 0.764 40 H -0.177 1.177 41 H -0.178 1.178 42 H 0.096 0.904 43 H 0.106 0.894 44 H 0.120 0.880 45 H 0.090 0.910 46 H 0.093 0.907 47 H 0.091 0.909 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.486 3.793 0.506 3.858 hybrid contribution 0.247 -0.576 0.457 0.776 sum -0.239 3.217 0.963 3.366 Atomic orbital electron populations 1.21820 0.92353 1.03244 1.03643 1.23075 0.95583 0.79912 1.02723 1.86506 1.24442 1.32689 1.83784 1.23732 0.80676 0.92606 0.72190 1.90686 1.60463 1.43150 1.45006 1.21179 0.96717 0.89830 1.02265 0.87041 1.21392 0.91514 0.96432 1.04514 1.21814 1.01655 0.95494 0.97366 1.21084 0.93055 0.81827 1.00006 0.88784 1.45669 1.65392 1.16909 1.08713 1.16930 0.76754 0.84034 0.84077 1.90788 1.51942 1.69053 1.30497 1.20045 1.15870 0.93276 0.87471 1.21237 1.03761 0.93806 0.97258 1.20519 1.11497 0.99090 0.92554 1.20098 1.05522 0.86104 0.94057 1.24531 0.95981 1.03298 0.92525 1.86455 1.60238 1.52540 1.36555 0.95453 0.81264 0.79828 0.81998 1.43768 1.46075 1.08393 1.07507 1.22332 1.02802 1.03620 0.78101 1.21927 0.94737 0.96599 1.03381 1.21479 1.01759 0.95224 0.96107 0.90028 0.91384 0.91368 0.91122 0.91134 0.90388 0.90103 0.90212 0.90759 0.76182 0.83470 0.83799 0.90164 0.76382 1.17726 1.17800 0.90414 0.89410 0.87993 0.91047 0.90666 0.90902 0.89899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 10.29 37.16 0.38 0.58 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.70 10.12 -39.26 -0.40 -1.10 16 4 C 0.47 1.07 7.26 36.00 0.26 1.33 16 5 O -0.51 -2.62 15.73 -18.75 -0.29 -2.92 16 6 C -0.08 0.05 2.63 -91.77 -0.24 -0.19 16 7 H 0.11 -0.24 8.14 -51.93 -0.42 -0.67 16 8 C -0.10 0.08 4.49 -26.73 -0.12 -0.04 16 9 C -0.13 0.27 5.39 -26.73 -0.14 0.12 16 10 C 0.14 -0.05 2.49 -67.92 -0.17 -0.22 16 11 H 0.09 0.16 7.52 -51.93 -0.39 -0.23 16 12 N -0.72 -0.04 5.06 -55.11 -0.28 -0.32 16 13 C 0.59 2.04 7.74 -12.86 -0.10 1.94 16 14 O -0.54 -3.41 14.19 5.19 0.07 -3.34 16 15 C -0.05 -0.18 6.89 -81.98 -0.56 -0.75 16 16 C -0.13 -0.25 10.35 -39.12 -0.41 -0.65 16 17 C -0.21 -0.52 9.37 -39.98 -0.37 -0.90 16 18 C 0.06 0.17 6.17 -81.95 -0.51 -0.33 16 19 C -0.05 0.03 2.89 36.01 0.10 0.13 16 20 O -0.55 0.56 10.50 -35.23 -0.37 0.19 16 21 Si 0.72 -1.24 31.22 -169.99 -5.31 -6.55 16 22 N -0.39 -1.48 3.16 -115.62 -0.37 -1.84 16 23 C 0.07 0.19 9.37 59.85 0.56 0.75 16 24 C -0.13 0.07 5.49 -26.76 -0.15 -0.07 16 25 C -0.11 0.07 5.13 -26.76 -0.14 -0.06 16 26 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 27 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 30 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 31 H 0.08 0.04 8.10 -51.93 -0.42 -0.38 16 32 H 0.08 -0.03 8.10 -51.93 -0.42 -0.46 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 34 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 35 H 0.40 -0.95 7.50 -40.82 -0.31 -1.26 16 36 H 0.15 -0.20 7.45 -52.49 -0.39 -0.59 16 37 H 0.14 0.17 6.70 -52.48 -0.35 -0.19 16 38 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 39 H 0.39 -2.37 8.74 45.56 0.40 -1.97 16 40 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 41 H -0.25 -0.10 6.87 56.52 0.39 0.29 16 42 H 0.08 0.21 8.14 -51.93 -0.42 -0.21 16 43 H 0.09 0.11 7.15 -51.93 -0.37 -0.27 16 44 H 0.10 0.38 5.97 -51.93 -0.31 0.07 16 45 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 46 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 47 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 48 H 0.08 -0.07 8.11 -51.93 -0.42 -0.49 16 LS Contribution 387.10 15.07 5.83 5.83 Total: 0.00 -10.00 387.10 -10.16 -20.15 By element: Atomic # 1 Polarization: -4.33 SS G_CDS: -7.68 Total: -12.01 kcal Atomic # 6 Polarization: 3.26 SS G_CDS: -1.37 Total: 1.89 kcal Atomic # 7 Polarization: -1.52 SS G_CDS: -0.64 Total: -2.16 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -0.99 Total: -7.15 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.31 Total: -6.55 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -10.00 -10.16 -20.15 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_10803936.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.654 kcal (2) G-P(sol) polarization free energy of solvation -9.996 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.650 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.155 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds