Wall clock time and date at job start Sun Mar 7 2021 02:27:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45195 * 109.47576 * 2 1 4 4 C 1.34227 * 117.00643 * 180.02562 * 3 2 1 5 5 O 1.20826 * 119.99484 * 359.97438 * 4 3 2 6 6 C 1.50694 * 120.00383 * 179.97438 * 4 3 2 7 7 H 1.08997 * 109.47050 * 299.99501 * 6 4 3 8 8 C 1.53000 * 109.47261 * 59.99753 * 6 4 3 9 9 C 1.52994 * 109.47066 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.47419 * 299.99893 * 9 8 6 11 11 H 1.08997 * 109.47020 * 299.99993 * 10 9 8 12 12 N 1.46500 * 109.46928 * 179.97438 * 10 9 8 13 13 C 1.34770 * 119.99945 * 85.00497 * 12 10 9 14 14 O 1.21719 * 120.00509 * 359.97438 * 13 12 10 15 15 C 1.46572 * 119.99891 * 179.97438 * 13 12 10 16 16 C 1.40855 * 126.57629 * 180.02562 * 15 13 12 17 17 C 1.40093 * 132.87093 * 359.96875 * 16 15 13 18 18 C 1.36451 * 119.25434 * 179.97438 * 17 16 15 19 19 C 1.50702 * 120.29551 * 180.02562 * 18 17 16 20 20 O 1.42899 * 109.47072 * 119.99774 * 19 18 17 21 21 Si 1.86301 * 109.46897 * 239.99964 * 19 18 17 22 22 C 1.40159 * 119.40983 * 359.97438 * 18 17 16 23 23 C 1.35184 * 120.31838 * 0.02562 * 22 18 17 24 24 N 1.36240 * 120.70993 * 359.95590 * 23 22 18 25 25 N 1.40011 * 132.01371 * 180.33297 * 24 23 22 26 26 C 1.30742 * 109.60548 * 180.16264 * 25 24 23 27 27 C 1.53000 * 109.47062 * 60.00378 * 10 9 8 28 28 C 1.53002 * 109.47080 * 180.02562 * 6 4 3 29 29 H 1.09008 * 109.47128 * 300.00576 * 1 2 3 30 30 H 1.08992 * 109.47426 * 60.00125 * 1 2 3 31 31 H 1.09001 * 109.47563 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47319 * 239.99303 * 2 1 3 33 33 H 1.09004 * 109.47009 * 119.99803 * 2 1 3 34 34 H 1.08998 * 109.46862 * 299.99968 * 8 6 4 35 35 H 1.09003 * 109.46968 * 60.00213 * 8 6 4 36 36 H 1.08998 * 109.47428 * 179.97438 * 9 8 6 37 37 H 1.09008 * 109.47357 * 60.00245 * 9 8 6 38 38 H 0.97005 * 120.00145 * 264.99925 * 12 10 9 39 39 H 1.07995 * 120.37165 * 0.02562 * 17 16 15 40 40 H 1.09001 * 109.46648 * 359.97438 * 19 18 17 41 41 H 0.96700 * 113.99873 * 180.02562 * 20 19 18 42 42 H 1.48502 * 109.99936 * 178.68376 * 21 19 18 43 43 H 1.48504 * 109.99804 * 299.99432 * 21 19 18 44 44 H 1.08000 * 119.84162 * 180.02562 * 22 18 17 45 45 H 1.08003 * 119.64624 * 179.97438 * 23 22 18 46 46 H 1.08002 * 125.63185 * 179.84462 * 26 25 24 47 47 H 1.09003 * 109.47191 * 59.99604 * 27 10 9 48 48 H 1.08998 * 109.47524 * 179.97438 * 27 10 9 49 49 H 1.08997 * 109.47459 * 59.99843 * 28 6 4 50 50 H 1.09003 * 109.47188 * 299.99810 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9207 2.9373 -0.0012 7 1 3.5846 3.4691 -0.8912 8 6 3.4496 3.6847 1.2480 9 6 4.0350 5.0982 1.2476 10 6 5.5629 5.0176 1.2475 11 1 5.8987 4.4855 2.1376 12 7 6.1233 6.3711 1.2466 13 6 6.2873 7.0334 2.4088 14 8 5.9694 6.5071 3.4593 15 6 6.8485 8.3874 2.4079 16 6 7.0792 9.2011 3.5342 17 6 6.8702 9.0110 4.9064 18 6 7.2022 10.0086 5.7760 19 6 6.9877 9.8289 7.2569 20 8 8.2393 9.9438 7.9368 21 14 5.8203 11.1408 7.8789 22 6 7.7454 11.2016 5.2799 23 6 7.9384 11.3631 3.9517 24 7 7.6105 10.3728 3.0755 25 7 7.7120 10.2830 1.6819 26 6 7.2611 9.1224 1.2831 27 6 6.0340 4.2703 -0.0017 28 6 5.4487 2.8571 -0.0023 29 1 -0.3634 0.5140 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3634 -1.0276 0.0005 32 1 1.8933 -0.5139 -0.8899 33 1 1.8933 -0.5138 0.8900 34 1 2.3612 3.7417 1.2483 35 1 3.7859 3.1528 2.1381 36 1 3.6991 5.6309 2.1373 37 1 3.6991 5.6304 0.3576 38 1 6.3764 6.7907 0.4094 39 1 6.4517 8.0849 5.2718 40 1 6.5606 8.8439 7.4452 41 1 8.1770 9.8382 8.8960 42 1 5.5756 10.9554 9.3319 43 1 6.3908 12.4887 7.6280 44 1 8.0111 11.9957 5.9620 45 1 8.3574 12.2871 3.5812 46 1 7.2174 8.7825 0.2589 47 1 5.6981 4.8024 -0.8917 48 1 7.1225 4.2132 -0.0021 49 1 5.7839 2.3249 -0.8925 50 1 5.7853 2.3251 0.8875 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_11618758.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:27:23 Heat of formation + Delta-G solvation = -58.193710 kcal Electronic energy + Delta-G solvation = -33510.702225 eV Core-core repulsion = 28892.016461 eV Total energy + Delta-G solvation = -4618.685765 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.24491 -41.70438 -40.59097 -39.28925 -38.77330 -37.46926 -37.39720 -35.14718 -34.22472 -32.75035 -32.12956 -31.85361 -31.31327 -29.82106 -27.31764 -25.66056 -24.80535 -23.93025 -23.81624 -23.26938 -22.83508 -21.77287 -21.25701 -20.68381 -19.15994 -18.62502 -18.51684 -18.02341 -17.68092 -17.51625 -17.37108 -16.88860 -16.85839 -16.71571 -15.95505 -15.85032 -15.61021 -15.46151 -15.14785 -14.90547 -14.80028 -14.48471 -14.43580 -14.12578 -14.08201 -14.04986 -13.78870 -13.49370 -13.27214 -13.26692 -12.99879 -12.87909 -12.74940 -12.69552 -12.48213 -12.35496 -12.22466 -12.10451 -11.90126 -11.63139 -11.52790 -11.45303 -11.37898 -11.18684 -10.84360 -10.68413 -10.27323 -9.95735 -8.71957 -5.07493 -0.53181 -0.07760 1.04397 1.07850 1.13892 1.27899 1.47519 1.70223 1.78314 2.07423 2.28174 2.63300 2.97036 3.15249 3.44657 3.49927 3.53989 3.57562 3.64974 3.72835 3.87842 3.91624 3.99262 4.02827 4.03816 4.08007 4.15363 4.19238 4.26628 4.27614 4.31972 4.32893 4.39046 4.40914 4.55983 4.64052 4.70257 4.77344 4.78329 4.83262 4.96531 4.98810 5.04059 5.08741 5.11316 5.13239 5.19149 5.23833 5.28767 5.33437 5.54053 5.61782 5.69185 6.26116 6.35760 6.66047 6.82963 7.44504 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.111 0.889 8 C -0.108 4.108 9 C -0.127 4.127 10 C 0.146 3.854 11 H 0.092 0.908 12 N -0.726 5.726 13 C 0.603 3.397 14 O -0.549 6.549 15 C -0.316 4.316 16 C 0.169 3.831 17 C -0.092 4.092 18 C -0.026 4.026 19 C -0.077 4.077 20 O -0.532 6.532 21 Si 0.692 3.308 22 C -0.144 4.144 23 C 0.115 3.885 24 N -0.265 5.265 25 N -0.314 5.314 26 C 0.119 3.881 27 C -0.126 4.126 28 C -0.101 4.101 29 H 0.067 0.933 30 H 0.067 0.933 31 H 0.081 0.919 32 H 0.070 0.930 33 H 0.070 0.930 34 H 0.081 0.919 35 H 0.072 0.928 36 H 0.077 0.923 37 H 0.069 0.931 38 H 0.398 0.602 39 H 0.165 0.835 40 H 0.084 0.916 41 H 0.385 0.615 42 H -0.252 1.252 43 H -0.248 1.248 44 H 0.159 0.841 45 H 0.177 0.823 46 H 0.198 0.802 47 H 0.073 0.927 48 H 0.078 0.922 49 H 0.079 0.921 50 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.466 2.542 -0.458 4.323 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.394 6.394 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.146 4.146 9 C -0.166 4.166 10 C 0.041 3.959 11 H 0.110 0.890 12 N -0.377 5.377 13 C 0.392 3.608 14 O -0.427 6.427 15 C -0.331 4.331 16 C 0.048 3.952 17 C -0.112 4.112 18 C -0.031 4.031 19 C -0.186 4.186 20 O -0.340 6.340 21 Si 0.590 3.410 22 C -0.166 4.166 23 C -0.011 4.011 24 N -0.029 5.029 25 N -0.134 5.134 26 C -0.062 4.062 27 C -0.164 4.164 28 C -0.139 4.139 29 H 0.086 0.914 30 H 0.086 0.914 31 H 0.099 0.901 32 H 0.088 0.912 33 H 0.089 0.911 34 H 0.100 0.900 35 H 0.090 0.910 36 H 0.096 0.904 37 H 0.088 0.912 38 H 0.232 0.768 39 H 0.182 0.818 40 H 0.102 0.898 41 H 0.234 0.766 42 H -0.176 1.176 43 H -0.172 1.172 44 H 0.177 0.823 45 H 0.194 0.806 46 H 0.215 0.785 47 H 0.091 0.909 48 H 0.097 0.903 49 H 0.097 0.903 50 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -2.870 3.723 -0.285 4.709 hybrid contribution 0.698 -1.088 0.461 1.372 sum -2.171 2.635 0.176 3.419 Atomic orbital electron populations 1.21817 0.92374 1.03219 1.03642 1.23066 0.95565 0.79963 1.02701 1.86504 1.24482 1.32635 1.83796 1.23767 0.80647 0.92660 0.72155 1.90686 1.60468 1.43181 1.45037 1.21179 0.96715 0.89743 1.02318 0.87106 1.21495 1.01680 0.95432 0.95992 1.21926 0.94919 0.96355 1.03371 1.21004 0.92993 0.82243 0.99613 0.89009 1.45748 1.66127 1.16990 1.08813 1.16815 0.76835 0.83551 0.83580 1.90780 1.51946 1.68849 1.31170 1.19605 1.23600 0.98759 0.91161 1.19233 0.95340 0.86544 0.94082 1.20660 1.01368 1.00488 0.88642 1.19350 0.96076 0.93236 0.94458 1.24727 0.93110 1.09407 0.91309 1.86578 1.28100 1.95063 1.24261 0.94468 0.86130 0.77698 0.82671 1.20787 1.02741 0.99517 0.93506 1.21559 0.98940 0.92665 0.87920 1.46087 1.38929 1.11146 1.06726 1.77635 1.29251 1.21764 0.84758 1.24055 0.92343 0.90156 0.99631 1.21813 1.01548 0.95459 0.97561 1.21382 0.91518 0.96572 1.04402 0.91357 0.91392 0.90065 0.91170 0.91137 0.90003 0.90953 0.90440 0.91225 0.76811 0.81764 0.89779 0.76649 1.17578 1.17161 0.82327 0.80587 0.78519 0.90878 0.90342 0.90256 0.90449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.22 10.29 37.15 0.38 0.61 16 2 C 0.06 0.03 6.19 37.15 0.23 0.26 16 3 O -0.36 -0.62 10.12 -39.25 -0.40 -1.02 16 4 C 0.46 0.98 7.26 36.00 0.26 1.24 16 5 O -0.51 -2.56 15.73 -18.75 -0.29 -2.85 16 6 C -0.08 0.07 2.63 -91.77 -0.24 -0.17 16 7 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 8 C -0.11 0.11 5.14 -26.73 -0.14 -0.02 16 9 C -0.13 0.14 5.49 -26.73 -0.15 -0.01 16 10 C 0.15 -0.12 2.46 -67.93 -0.17 -0.29 16 11 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 12 N -0.73 0.58 5.07 -55.15 -0.28 0.30 16 13 C 0.60 1.49 7.75 -12.90 -0.10 1.39 16 14 O -0.55 -3.02 15.37 5.17 0.08 -2.94 16 15 C -0.32 -0.70 6.17 -104.68 -0.65 -1.35 16 16 C 0.17 0.49 6.76 -84.06 -0.57 -0.08 16 17 C -0.09 -0.16 9.35 -39.53 -0.37 -0.53 16 18 C -0.03 -0.01 4.53 -104.54 -0.47 -0.48 16 19 C -0.08 0.10 2.81 36.01 0.10 0.20 16 20 O -0.53 0.16 12.76 -35.23 -0.45 -0.28 16 21 Si 0.69 -1.56 31.97 -169.99 -5.43 -7.00 16 22 C -0.14 0.06 8.67 -39.95 -0.35 -0.29 16 23 C 0.12 0.00 11.17 -16.68 -0.19 -0.18 16 24 N -0.26 -0.64 3.86 -10.54 -0.04 -0.68 16 25 N -0.31 -0.86 12.57 30.75 0.39 -0.47 16 26 C 0.12 0.07 11.44 -17.14 -0.20 -0.13 16 27 C -0.13 0.31 5.39 -26.75 -0.14 0.16 16 28 C -0.10 0.09 4.49 -26.75 -0.12 -0.03 16 29 H 0.07 -0.10 8.14 -51.92 -0.42 -0.52 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 33 H 0.07 0.05 8.13 -51.93 -0.42 -0.38 16 34 H 0.08 -0.10 8.11 -51.93 -0.42 -0.52 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.07 -0.15 8.14 -51.92 -0.42 -0.57 16 38 H 0.40 -1.41 7.52 -40.82 -0.31 -1.72 16 39 H 0.16 0.27 7.01 -52.49 -0.37 -0.10 16 40 H 0.08 -0.21 7.70 -51.93 -0.40 -0.61 16 41 H 0.38 -1.62 8.74 45.56 0.40 -1.22 16 42 H -0.25 0.08 7.11 56.52 0.40 0.48 16 43 H -0.25 0.00 7.07 56.52 0.40 0.40 16 44 H 0.16 -0.31 7.53 -52.49 -0.39 -0.70 16 45 H 0.18 -0.48 8.06 -52.48 -0.42 -0.90 16 46 H 0.20 -0.75 7.46 -52.49 -0.39 -1.14 16 47 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 49 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 50 H 0.08 0.03 8.10 -51.93 -0.42 -0.39 16 LS Contribution 415.06 15.07 6.25 6.25 Total: 0.00 -10.92 415.06 -10.43 -21.36 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: -7.39 Total: -12.97 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -2.87 Total: 0.31 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: 0.07 Total: -0.85 kcal Atomic # 8 Polarization: -6.04 SS G_CDS: -1.06 Total: -7.10 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.43 Total: -7.00 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -10.92 -10.43 -21.36 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_11618758.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.839 kcal (2) G-P(sol) polarization free energy of solvation -10.921 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.355 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.194 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds