Wall clock time and date at job start Sun Mar 7 2021 02:27:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.45202 * 109.47045 * 2 1 4 4 C 1.34229 * 116.99923 * 180.02562 * 3 2 1 5 5 O 1.20827 * 119.99860 * 359.97438 * 4 3 2 6 6 C 1.50699 * 119.99898 * 179.97438 * 4 3 2 7 7 H 1.08998 * 109.47303 * 299.99798 * 6 4 3 8 8 C 1.53004 * 109.47143 * 60.00005 * 6 4 3 9 9 C 1.52995 * 109.47178 * 180.02562 * 8 6 4 10 10 C 1.52999 * 109.47262 * 299.99708 * 9 8 6 11 11 H 1.09012 * 109.47040 * 300.00460 * 10 9 8 12 12 N 1.46492 * 109.47381 * 180.02562 * 10 9 8 13 13 C 1.34774 * 120.00345 * 85.00295 * 12 10 9 14 14 O 1.21286 * 119.99717 * 359.97438 * 13 12 10 15 15 C 1.50701 * 120.00373 * 180.02562 * 13 12 10 16 16 C 1.50701 * 109.47148 * 179.97438 * 15 13 12 17 17 C 1.38235 * 119.99808 * 89.99755 * 16 15 13 18 18 C 1.38243 * 119.99602 * 179.97438 * 17 16 15 19 19 C 1.38231 * 120.00070 * 0.07188 * 18 17 16 20 20 C 1.50701 * 119.99866 * 179.97438 * 19 18 17 21 21 O 1.42894 * 109.47162 * 119.93189 * 20 19 18 22 22 Si 1.86299 * 109.47216 * 359.93450 * 20 19 18 23 23 C 1.38234 * 119.99892 * 359.90902 * 19 18 17 24 24 C 1.38230 * 119.99865 * 269.97500 * 16 15 13 25 25 C 1.53003 * 109.47130 * 59.99901 * 10 9 8 26 26 C 1.52996 * 109.47157 * 300.00570 * 25 10 9 27 27 H 1.08995 * 109.47058 * 60.00324 * 1 2 3 28 28 H 1.08994 * 109.46939 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47042 * 300.00301 * 1 2 3 30 30 H 1.08998 * 109.47042 * 239.99699 * 2 1 3 31 31 H 1.08995 * 109.47058 * 119.99676 * 2 1 3 32 32 H 1.09003 * 109.46837 * 300.00288 * 8 6 4 33 33 H 1.08998 * 109.47190 * 59.99724 * 8 6 4 34 34 H 1.09001 * 109.47284 * 180.02562 * 9 8 6 35 35 H 1.08998 * 109.47288 * 59.99781 * 9 8 6 36 36 H 0.97000 * 119.99885 * 264.99901 * 12 10 9 37 37 H 1.08993 * 109.47576 * 59.99137 * 15 13 12 38 38 H 1.09001 * 109.46592 * 299.99075 * 15 13 12 39 39 H 1.08000 * 120.00616 * 359.70324 * 17 16 15 40 40 H 1.08001 * 119.99556 * 179.97438 * 18 17 16 41 41 H 1.08998 * 109.47497 * 239.93236 * 20 19 18 42 42 H 0.96701 * 114.00640 * 179.97438 * 21 20 19 43 43 H 1.48511 * 109.99911 * 298.68030 * 22 20 19 44 44 H 1.48502 * 110.00314 * 59.99893 * 22 20 19 45 45 H 1.07999 * 119.99751 * 180.02562 * 23 19 18 46 46 H 1.08001 * 120.00371 * 0.02562 * 24 16 15 47 47 H 1.08998 * 109.46895 * 60.00248 * 25 10 9 48 48 H 1.08999 * 109.47257 * 180.02562 * 25 10 9 49 49 H 1.09000 * 109.47243 * 179.97438 * 26 25 10 50 50 H 1.09012 * 109.47135 * 299.99517 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 -0.0012 7 1 3.5845 3.4693 -0.8912 8 6 3.4496 3.6848 1.2481 9 6 4.0338 5.0988 1.2471 10 6 5.5617 5.0193 1.2463 11 1 5.8984 4.4876 2.1364 12 7 6.1212 6.3732 1.2461 13 6 6.2852 7.0349 2.4087 14 8 5.9691 6.5096 3.4552 15 6 6.8601 8.4279 2.4083 16 6 6.9378 8.9396 3.8237 17 6 8.0759 8.7193 4.5768 18 6 8.1473 9.1892 5.8749 19 6 7.0802 9.8781 6.4203 20 6 7.1579 10.3898 7.8357 21 8 7.0136 11.8114 7.8368 22 14 8.8071 9.9325 8.5717 23 6 5.9424 10.0987 5.6670 24 6 5.8713 9.6298 4.3686 25 6 6.0329 4.2720 -0.0028 26 6 5.4486 2.8580 -0.0019 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8899 30 1 1.8933 -0.5139 -0.8899 31 1 1.8933 -0.5138 0.8900 32 1 2.3611 3.7417 1.2484 33 1 3.7858 3.1529 2.1381 34 1 3.6986 5.6310 2.1373 35 1 3.6972 5.6304 0.3571 36 1 6.3736 6.7935 0.4091 37 1 6.2203 9.0850 1.8194 38 1 7.8594 8.4083 1.9734 39 1 8.9075 8.1763 4.1526 40 1 9.0363 9.0166 6.4634 41 1 6.3593 9.9431 8.4280 42 1 7.0533 12.2102 8.7168 43 1 8.9562 8.4553 8.6055 44 1 9.9045 10.5356 7.7733 45 1 5.1088 10.6373 6.0930 46 1 4.9821 9.8019 3.7803 47 1 5.6963 4.8036 -0.8928 48 1 7.1215 4.2150 -0.0032 49 1 5.7839 2.3257 -0.8921 50 1 5.7853 2.3262 0.8882 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_12335836.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:27:41 Heat of formation + Delta-G solvation = -144.047262 kcal Electronic energy + Delta-G solvation = -30013.348789 eV Core-core repulsion = 25778.244237 eV Total energy + Delta-G solvation = -4235.104551 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.182 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.79447 -41.18136 -40.27037 -39.01268 -37.62357 -37.46703 -35.28173 -34.15113 -32.78594 -31.93931 -31.92201 -31.25683 -29.47147 -26.04303 -25.09867 -23.93933 -23.80613 -23.68017 -22.23055 -21.74689 -21.38056 -20.78445 -18.65753 -18.36735 -18.19167 -17.76097 -17.55353 -17.48780 -17.07592 -16.83721 -16.24151 -16.03624 -15.65495 -15.36466 -15.10302 -14.95355 -14.91074 -14.69016 -14.47374 -14.34224 -14.20683 -13.88051 -13.70636 -13.61074 -13.47739 -13.37300 -13.06373 -12.94092 -12.89611 -12.76266 -12.53436 -12.42897 -12.31052 -12.16829 -11.94656 -11.77322 -11.69091 -11.50084 -11.46574 -11.26108 -10.83163 -10.31504 -10.08628 -9.82513 -9.53828 -4.94046 0.27600 0.50226 1.22592 1.32237 1.64981 1.65776 1.68013 2.01603 2.09393 2.78027 3.41553 3.42842 3.47197 3.56738 3.60547 3.79922 3.82666 3.92301 3.95424 3.95867 3.97898 4.00142 4.04781 4.10746 4.17734 4.21810 4.25383 4.29278 4.31209 4.38516 4.45939 4.50022 4.54439 4.62439 4.71642 4.73220 4.80037 4.86338 4.90113 4.98869 5.00338 5.01952 5.03967 5.09924 5.14643 5.21271 5.40337 5.44828 5.50537 5.58554 5.60945 6.02544 6.45393 6.64600 6.77852 7.23471 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.111 0.889 8 C -0.108 4.108 9 C -0.127 4.127 10 C 0.142 3.858 11 H 0.090 0.910 12 N -0.730 5.730 13 C 0.515 3.485 14 O -0.526 6.526 15 C -0.103 4.103 16 C -0.064 4.064 17 C -0.098 4.098 18 C -0.122 4.122 19 C -0.074 4.074 20 C -0.072 4.072 21 O -0.546 6.546 22 Si 0.682 3.318 23 C -0.087 4.087 24 C -0.102 4.102 25 C -0.125 4.125 26 C -0.101 4.101 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.082 0.918 33 H 0.072 0.928 34 H 0.075 0.925 35 H 0.069 0.931 36 H 0.401 0.599 37 H 0.106 0.894 38 H 0.105 0.895 39 H 0.124 0.876 40 H 0.117 0.883 41 H 0.075 0.925 42 H 0.382 0.618 43 H -0.255 1.255 44 H -0.251 1.251 45 H 0.128 0.872 46 H 0.124 0.876 47 H 0.073 0.927 48 H 0.077 0.923 49 H 0.080 0.920 50 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.347 2.705 -1.481 3.365 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.099 4.099 7 H 0.129 0.871 8 C -0.146 4.146 9 C -0.165 4.165 10 C 0.037 3.963 11 H 0.108 0.892 12 N -0.382 5.382 13 C 0.301 3.699 14 O -0.401 6.401 15 C -0.143 4.143 16 C -0.064 4.064 17 C -0.116 4.116 18 C -0.140 4.140 19 C -0.074 4.074 20 C -0.182 4.182 21 O -0.352 6.352 22 Si 0.584 3.416 23 C -0.105 4.105 24 C -0.120 4.120 25 C -0.163 4.163 26 C -0.139 4.139 27 H 0.086 0.914 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.101 0.899 33 H 0.090 0.910 34 H 0.094 0.906 35 H 0.088 0.912 36 H 0.235 0.765 37 H 0.124 0.876 38 H 0.123 0.877 39 H 0.142 0.858 40 H 0.134 0.866 41 H 0.092 0.908 42 H 0.229 0.771 43 H -0.180 1.180 44 H -0.176 1.176 45 H 0.146 0.854 46 H 0.142 0.858 47 H 0.092 0.908 48 H 0.096 0.904 49 H 0.098 0.902 50 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.654 1.490 -1.479 2.198 hybrid contribution -0.319 -0.190 -0.898 0.972 sum -0.973 1.299 -2.377 2.878 Atomic orbital electron populations 1.21819 0.92333 1.03255 1.03646 1.23078 0.95598 0.79896 1.02726 1.86505 1.24429 1.32705 1.83777 1.23738 0.80686 0.92612 0.72191 1.90688 1.60467 1.43159 1.45012 1.21171 0.96694 0.89828 1.02250 0.87090 1.21493 1.01746 0.95333 0.96061 1.21913 0.94858 0.96514 1.03254 1.21045 0.93120 0.82452 0.99654 0.89151 1.46079 1.65845 1.17094 1.09182 1.20572 0.78114 0.87550 0.83672 1.90761 1.49356 1.68678 1.31293 1.20692 1.03799 0.94020 0.95806 1.19247 0.94426 0.98170 0.94576 1.20845 0.97880 0.99167 0.93715 1.20792 0.97387 1.00000 0.95788 1.19337 0.94695 0.98811 0.94577 1.24688 1.11520 0.85081 0.96946 1.86481 1.96631 1.17856 1.34243 0.95469 0.76321 0.81215 0.88614 1.20937 0.97531 0.98334 0.93712 1.21015 0.97785 0.97701 0.95484 1.21811 1.01499 0.95502 0.97468 1.21395 0.91565 0.96511 1.04445 0.91378 0.90020 0.91361 0.91131 0.91121 0.89936 0.90961 0.90605 0.91182 0.76493 0.87600 0.87710 0.85846 0.86568 0.90756 0.77066 1.18014 1.17568 0.85430 0.85770 0.90842 0.90386 0.90174 0.90450 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 10.29 37.16 0.38 0.59 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.66 10.12 -39.26 -0.40 -1.06 16 4 C 0.47 1.02 7.26 36.00 0.26 1.29 16 5 O -0.51 -2.59 15.73 -18.75 -0.30 -2.89 16 6 C -0.08 0.06 2.63 -91.77 -0.24 -0.18 16 7 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 8 C -0.11 0.09 5.14 -26.73 -0.14 -0.05 16 9 C -0.13 0.14 5.49 -26.73 -0.15 -0.01 16 10 C 0.14 -0.14 2.45 -67.93 -0.17 -0.30 16 11 H 0.09 0.14 7.58 -51.92 -0.39 -0.26 16 12 N -0.73 1.25 5.08 -53.81 -0.27 0.98 16 13 C 0.51 0.55 7.79 -10.99 -0.09 0.46 16 14 O -0.53 -2.98 15.70 5.55 0.09 -2.90 16 15 C -0.10 0.11 5.83 -29.03 -0.17 -0.06 16 16 C -0.06 -0.14 4.37 -104.63 -0.46 -0.60 16 17 C -0.10 -0.29 9.70 -39.58 -0.38 -0.68 16 18 C -0.12 -0.48 8.67 -39.58 -0.34 -0.82 16 19 C -0.07 -0.28 5.42 -104.63 -0.57 -0.84 16 20 C -0.07 -0.09 2.81 36.01 0.10 0.02 16 21 O -0.55 -0.55 12.74 -35.23 -0.45 -1.00 16 22 Si 0.68 0.05 29.79 -169.99 -5.06 -5.01 16 23 C -0.09 -0.28 9.61 -39.58 -0.38 -0.67 16 24 C -0.10 -0.25 9.70 -39.59 -0.38 -0.64 16 25 C -0.12 0.32 5.39 -26.73 -0.14 0.18 16 26 C -0.10 0.09 4.49 -26.73 -0.12 -0.03 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 31 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 32 H 0.08 -0.08 8.11 -51.93 -0.42 -0.50 16 33 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 34 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 36 H 0.40 -1.85 8.60 -40.82 -0.35 -2.20 16 37 H 0.11 -0.35 8.08 -51.93 -0.42 -0.77 16 38 H 0.10 -0.33 8.09 -51.93 -0.42 -0.74 16 39 H 0.12 0.14 8.06 -52.49 -0.42 -0.28 16 40 H 0.12 0.38 4.88 -52.49 -0.26 0.12 16 41 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 42 H 0.38 -1.57 8.74 45.56 0.40 -1.17 16 43 H -0.26 -0.71 7.11 56.52 0.40 -0.30 16 44 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 45 H 0.13 0.26 8.06 -52.49 -0.42 -0.16 16 46 H 0.12 0.06 8.06 -52.49 -0.42 -0.37 16 47 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 48 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 49 H 0.08 -0.05 8.10 -51.93 -0.42 -0.47 16 50 H 0.08 0.04 8.10 -51.92 -0.42 -0.39 16 LS Contribution 408.59 15.07 6.16 6.16 Total: 0.00 -10.64 408.59 -11.22 -21.86 By element: Atomic # 1 Polarization: -5.84 SS G_CDS: -8.23 Total: -14.08 kcal Atomic # 6 Polarization: 0.69 SS G_CDS: -2.75 Total: -2.06 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.27 Total: 0.98 kcal Atomic # 8 Polarization: -6.79 SS G_CDS: -1.05 Total: -7.85 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.06 Total: -5.01 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -10.64 -11.22 -21.86 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12335836.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.183 kcal (2) G-P(sol) polarization free energy of solvation -10.644 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.827 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.221 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.864 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.047 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds