Wall clock time and date at job start Sun Mar 7 2021 02:27:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45197 * 109.46956 * 2 1 4 4 C 1.34227 * 117.00127 * 179.97438 * 3 2 1 5 5 O 1.20826 * 119.99674 * 0.02562 * 4 3 2 6 6 C 1.50699 * 120.00422 * 180.02562 * 4 3 2 7 7 H 1.08999 * 109.46887 * 300.00347 * 6 4 3 8 8 C 1.52995 * 109.46841 * 60.00242 * 6 4 3 9 9 C 1.53000 * 109.47058 * 180.02562 * 8 6 4 10 10 C 1.52998 * 109.47266 * 299.99682 * 9 8 6 11 11 H 1.08998 * 109.47289 * 300.00512 * 10 9 8 12 12 N 1.46495 * 109.47344 * 179.97438 * 10 9 8 13 13 C 1.34785 * 119.99884 * 85.00496 * 12 10 9 14 14 O 1.21593 * 119.99727 * 359.97438 * 13 12 10 15 15 C 1.47569 * 120.00083 * 180.02562 * 13 12 10 16 16 C 1.40210 * 119.83340 * 359.97436 * 15 13 12 17 17 C 1.36232 * 120.37683 * 179.97438 * 16 15 13 18 18 C 1.39874 * 119.96331 * 0.02562 * 17 16 15 19 19 C 1.46254 * 133.84306 * 179.97438 * 18 17 16 20 20 C 1.50703 * 126.47950 * 0.03145 * 19 18 17 21 21 O 1.42898 * 109.47319 * 74.99731 * 20 19 18 22 22 Si 1.86300 * 109.46898 * 194.99806 * 20 19 18 23 23 C 1.34455 * 107.03781 * 180.02562 * 19 18 17 24 24 N 1.36569 * 109.98207 * 359.97438 * 23 19 18 25 25 C 1.37829 * 109.85987 * 359.76823 * 24 23 19 26 26 C 1.38647 * 133.37394 * 179.51319 * 25 24 23 27 27 C 1.53006 * 109.46954 * 59.99854 * 10 9 8 28 28 C 1.52995 * 109.47164 * 180.02562 * 6 4 3 29 29 H 1.08996 * 109.47466 * 299.99602 * 1 2 3 30 30 H 1.09007 * 109.47382 * 59.99656 * 1 2 3 31 31 H 1.08999 * 109.47402 * 179.97438 * 1 2 3 32 32 H 1.08999 * 109.46740 * 240.00338 * 2 1 3 33 33 H 1.08994 * 109.47263 * 120.00227 * 2 1 3 34 34 H 1.09000 * 109.47292 * 299.99815 * 8 6 4 35 35 H 1.08994 * 109.47614 * 60.00029 * 8 6 4 36 36 H 1.09002 * 109.47530 * 180.02562 * 9 8 6 37 37 H 1.08998 * 109.47384 * 60.00135 * 9 8 6 38 38 H 0.97001 * 120.00607 * 265.00058 * 12 10 9 39 39 H 1.07997 * 119.80704 * 359.97438 * 16 15 13 40 40 H 1.08003 * 120.01709 * 180.02562 * 17 16 15 41 41 H 1.09005 * 109.46921 * 314.99280 * 20 19 18 42 42 H 0.96697 * 113.99851 * 60.00219 * 21 20 19 43 43 H 1.48500 * 110.00277 * 179.97438 * 22 20 19 44 44 H 1.48503 * 109.99851 * 301.31555 * 22 20 19 45 45 H 1.07996 * 125.00829 * 180.02562 * 23 19 18 46 46 H 0.96996 * 125.06417 * 179.97438 * 24 23 19 47 47 H 1.08002 * 120.17127 * 0.67896 * 26 25 24 48 48 H 1.08998 * 109.46585 * 60.00227 * 27 10 9 49 49 H 1.08993 * 109.46938 * 179.97438 * 27 10 9 50 50 H 1.08999 * 109.47567 * 59.99998 * 28 6 4 51 51 H 1.08999 * 109.47409 * 299.99913 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9207 2.9374 0.0012 7 1 3.5850 3.4698 -0.8888 8 6 3.4487 3.6839 1.2505 9 6 4.0330 5.0980 1.2508 10 6 5.5609 5.0185 1.2511 11 1 5.8969 4.4862 2.1409 12 7 6.1204 6.3724 1.2508 13 6 6.2836 7.0343 2.4135 14 8 5.9661 6.5079 3.4625 15 6 6.8467 8.3984 2.4132 16 6 7.2111 9.0023 1.2014 17 6 7.7314 10.2613 1.1883 18 6 7.9049 10.9581 2.3886 19 6 8.4206 12.2849 2.7244 20 6 8.9379 13.3167 1.7555 21 8 7.8386 13.9204 1.0706 22 14 9.8830 14.6244 2.6869 23 6 8.3458 12.4099 4.0611 24 7 7.8241 11.2724 4.6077 25 6 7.5371 10.3634 3.6122 26 6 7.0131 9.0798 3.6170 27 6 6.0329 4.2719 0.0017 28 6 5.4485 2.8573 0.0010 29 1 -0.3634 0.5137 0.8900 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 1.8933 -0.5138 -0.8900 33 1 1.8933 -0.5138 0.8899 34 1 2.3602 3.7410 1.2501 35 1 3.7843 3.1516 2.1404 36 1 3.6972 5.6297 2.1411 37 1 3.6970 5.6302 0.3609 38 1 6.3734 6.7925 0.4139 39 1 7.0786 8.4663 0.2733 40 1 8.0098 10.7211 0.2515 41 1 9.5977 12.8374 1.0322 42 1 7.2092 14.3667 1.6535 43 1 10.3990 15.6477 1.7425 44 1 9.0032 15.2636 3.6981 45 1 8.6523 13.2818 4.6199 46 1 7.6748 11.1271 5.5551 47 1 6.7320 8.6117 4.5488 48 1 5.6969 4.8041 -0.8882 49 1 7.1214 4.2156 0.0017 50 1 5.7845 2.3256 -0.8892 51 1 5.7846 2.3248 0.8907 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_12335838.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:27:46 Heat of formation + Delta-G solvation = -105.379490 kcal Electronic energy + Delta-G solvation = -32996.269726 eV Core-core repulsion = 28440.963744 eV Total energy + Delta-G solvation = -4555.305983 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.48813 -41.74158 -40.90232 -39.14859 -37.95594 -37.56538 -37.38373 -35.29775 -33.27029 -32.77760 -31.88729 -31.52564 -30.71637 -29.96461 -26.56860 -25.80204 -24.48672 -23.88482 -23.61318 -23.43147 -21.89084 -21.39765 -20.91608 -20.73054 -19.39937 -18.63163 -18.40044 -17.88653 -17.53504 -17.44752 -17.13982 -16.91236 -16.26965 -16.08210 -15.91289 -15.68443 -15.42683 -15.28689 -15.05331 -14.92303 -14.77682 -14.72317 -14.50816 -14.44080 -14.10517 -13.89830 -13.80772 -13.54259 -13.31227 -13.11819 -12.89628 -12.74453 -12.62713 -12.50360 -12.49379 -12.37306 -12.25948 -12.17137 -11.80765 -11.64741 -11.47058 -11.41936 -11.22855 -10.83897 -10.75812 -10.50102 -10.05283 -9.35183 -8.82066 -4.98700 -0.25381 0.40213 1.26028 1.27476 1.35937 1.53009 1.68096 1.87244 1.94349 2.03819 2.23425 2.94647 3.45788 3.46544 3.50014 3.58247 3.61877 3.74153 3.76737 3.86570 3.88651 3.98179 4.01770 4.03353 4.11177 4.14517 4.23249 4.28252 4.31618 4.32658 4.36327 4.43058 4.50743 4.56650 4.59353 4.67191 4.75358 4.76368 4.82327 4.91163 4.95517 4.99203 5.02580 5.05281 5.07922 5.18982 5.24138 5.27118 5.44163 5.44347 5.51953 5.55372 5.61095 5.98843 6.34941 6.47759 6.52092 6.81192 7.26828 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.108 4.108 9 C -0.128 4.128 10 C 0.142 3.858 11 H 0.093 0.907 12 N -0.723 5.723 13 C 0.564 3.436 14 O -0.537 6.537 15 C -0.121 4.121 16 C -0.113 4.113 17 C -0.072 4.072 18 C -0.063 4.063 19 C -0.207 4.207 20 C -0.037 4.037 21 O -0.531 6.531 22 Si 0.684 3.316 23 C 0.074 3.926 24 N -0.584 5.584 25 C 0.082 3.918 26 C -0.057 4.057 27 C -0.126 4.126 28 C -0.101 4.101 29 H 0.067 0.933 30 H 0.067 0.933 31 H 0.081 0.919 32 H 0.070 0.930 33 H 0.070 0.930 34 H 0.082 0.918 35 H 0.072 0.928 36 H 0.076 0.924 37 H 0.070 0.930 38 H 0.401 0.599 39 H 0.126 0.874 40 H 0.130 0.870 41 H 0.115 0.885 42 H 0.374 0.626 43 H -0.256 1.256 44 H -0.260 1.260 45 H 0.176 0.824 46 H 0.422 0.578 47 H 0.136 0.864 48 H 0.073 0.927 49 H 0.079 0.921 50 H 0.080 0.920 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.667 2.704 -0.137 2.789 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.146 4.146 9 C -0.166 4.166 10 C 0.038 3.962 11 H 0.111 0.889 12 N -0.374 5.374 13 C 0.352 3.648 14 O -0.415 6.415 15 C -0.126 4.126 16 C -0.133 4.133 17 C -0.090 4.090 18 C -0.068 4.068 19 C -0.214 4.214 20 C -0.148 4.148 21 O -0.337 6.337 22 Si 0.585 3.415 23 C -0.055 4.055 24 N -0.186 5.186 25 C -0.025 4.025 26 C -0.078 4.078 27 C -0.164 4.164 28 C -0.139 4.139 29 H 0.086 0.914 30 H 0.086 0.914 31 H 0.100 0.900 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.101 0.899 35 H 0.091 0.909 36 H 0.095 0.905 37 H 0.089 0.911 38 H 0.237 0.763 39 H 0.144 0.856 40 H 0.148 0.852 41 H 0.133 0.867 42 H 0.221 0.779 43 H -0.180 1.180 44 H -0.185 1.185 45 H 0.193 0.807 46 H 0.260 0.740 47 H 0.154 0.846 48 H 0.092 0.908 49 H 0.097 0.903 50 H 0.098 0.902 51 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.988 2.592 0.440 2.809 hybrid contribution -1.172 0.159 -0.101 1.187 sum -0.183 2.750 0.339 2.777 Atomic orbital electron populations 1.21819 0.92364 1.03232 1.03643 1.23070 0.95575 0.79931 1.02714 1.86505 1.24463 1.32667 1.83786 1.23750 0.80663 0.92633 0.72171 1.90687 1.60462 1.43168 1.45027 1.21178 0.96723 0.89791 1.02283 0.87076 1.21491 1.01727 0.95325 0.96054 1.21928 0.94809 0.96506 1.03389 1.21065 0.93131 0.82193 0.99800 0.88938 1.45949 1.65342 1.17005 1.09130 1.18155 0.77643 0.85281 0.83679 1.90796 1.50642 1.68757 1.31299 1.19440 1.05041 0.94503 0.93585 1.20689 1.00457 0.95567 0.96600 1.20204 0.98353 0.93644 0.96849 1.19165 1.01304 0.93886 0.92445 1.20669 1.11262 0.96249 0.93252 1.24289 0.92998 0.98701 0.98813 1.86609 1.36958 1.73233 1.36884 0.95166 0.85993 0.79662 0.80713 1.21821 0.99218 0.90703 0.93745 1.41724 1.54922 1.13054 1.08875 1.18087 1.03761 0.92354 0.88274 1.20078 0.98298 0.90792 0.98613 1.21830 1.01605 0.95490 0.97446 1.21398 0.91514 0.96481 1.04466 0.91362 0.91389 0.90046 0.91146 0.91127 0.89950 0.90921 0.90518 0.91122 0.76333 0.85624 0.85165 0.86706 0.77887 1.18035 1.18494 0.80711 0.74025 0.84643 0.90821 0.90258 0.90164 0.90407 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.20 10.29 37.16 0.38 0.58 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.68 10.12 -39.25 -0.40 -1.08 16 4 C 0.47 1.04 7.25 36.01 0.26 1.30 16 5 O -0.51 -2.60 15.73 -18.75 -0.29 -2.89 16 6 C -0.08 0.05 2.63 -91.78 -0.24 -0.19 16 7 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 8 C -0.11 0.08 5.14 -26.73 -0.14 -0.05 16 9 C -0.13 0.10 5.49 -26.73 -0.15 -0.05 16 10 C 0.14 -0.08 2.45 -67.93 -0.17 -0.25 16 11 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 12 N -0.72 0.40 5.03 -54.83 -0.28 0.13 16 13 C 0.56 1.39 7.73 -12.45 -0.10 1.30 16 14 O -0.54 -3.22 15.98 5.28 0.08 -3.13 16 15 C -0.12 -0.19 5.87 -104.95 -0.62 -0.81 16 16 C -0.11 0.01 9.46 -39.56 -0.37 -0.36 16 17 C -0.07 -0.04 10.03 -39.69 -0.40 -0.44 16 18 C -0.06 -0.09 6.35 -105.05 -0.67 -0.75 16 19 C -0.21 0.04 5.57 -102.74 -0.57 -0.54 16 20 C -0.04 0.03 3.06 36.01 0.11 0.14 16 21 O -0.53 -0.50 12.88 -35.23 -0.45 -0.95 16 22 Si 0.68 -1.38 30.82 -169.99 -5.24 -6.62 16 23 C 0.07 -0.13 10.43 -16.78 -0.17 -0.31 16 24 N -0.58 0.82 6.07 -10.68 -0.06 0.76 16 25 C 0.08 0.09 7.26 -84.00 -0.61 -0.52 16 26 C -0.06 -0.10 9.61 -39.03 -0.37 -0.48 16 27 C -0.13 0.29 5.39 -26.70 -0.14 0.15 16 28 C -0.10 0.09 4.50 -26.71 -0.12 -0.03 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 -0.09 8.14 -51.92 -0.42 -0.51 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 33 H 0.07 0.06 8.13 -51.93 -0.42 -0.37 16 34 H 0.08 -0.08 8.11 -51.93 -0.42 -0.50 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 36 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 37 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.40 -1.22 6.59 -40.82 -0.27 -1.49 16 39 H 0.13 -0.37 6.36 -52.49 -0.33 -0.71 16 40 H 0.13 -0.07 8.06 -52.48 -0.42 -0.49 16 41 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 42 H 0.37 -0.69 8.70 45.56 0.40 -0.30 16 43 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 44 H -0.26 0.19 7.00 56.52 0.40 0.59 16 45 H 0.18 -0.79 6.27 -52.49 -0.33 -1.12 16 46 H 0.42 -1.71 8.96 -40.82 -0.37 -2.08 16 47 H 0.14 0.23 7.62 -52.49 -0.40 -0.17 16 48 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 49 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 50 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 51 H 0.08 0.03 8.10 -51.93 -0.42 -0.39 16 LS Contribution 417.38 15.07 6.29 6.29 Total: 0.00 -10.29 417.38 -11.85 -22.14 By element: Atomic # 1 Polarization: -5.95 SS G_CDS: -7.65 Total: -13.60 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: -3.86 Total: -1.04 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.34 Total: 0.88 kcal Atomic # 8 Polarization: -6.99 SS G_CDS: -1.06 Total: -8.05 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.24 Total: -6.62 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -10.29 -11.85 -22.14 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12335838.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.238 kcal (2) G-P(sol) polarization free energy of solvation -10.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.855 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.142 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.379 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds