Wall clock time and date at job start Sun Mar 7 2021 02:28:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45196 * 109.47367 * 2 1 4 4 C 1.34220 * 116.99913 * 180.02562 * 3 2 1 5 5 O 1.20820 * 120.00497 * 359.97438 * 4 3 2 6 6 C 1.50712 * 120.00031 * 179.97438 * 4 3 2 7 7 H 1.09000 * 109.46559 * 59.99942 * 6 4 3 8 8 C 1.52996 * 109.47086 * 179.97438 * 6 4 3 9 9 C 1.53002 * 109.46972 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.46817 * 299.99733 * 9 8 6 11 11 H 1.09001 * 109.47502 * 300.00518 * 10 9 8 12 12 N 1.46500 * 109.47007 * 180.02562 * 10 9 8 13 13 C 1.34773 * 120.00050 * 85.00124 * 12 10 9 14 14 O 1.21555 * 120.00076 * 0.02562 * 13 12 10 15 15 C 1.47851 * 119.99772 * 179.97438 * 13 12 10 16 16 C 1.39544 * 120.14168 * 0.02562 * 15 13 12 17 17 C 1.38074 * 119.84149 * 179.97438 * 16 15 13 18 18 Br 1.89100 * 119.93607 * 179.97438 * 17 16 15 19 19 C 1.38422 * 120.12311 * 359.97438 * 17 16 15 20 20 C 1.38358 * 120.28586 * 0.02562 * 19 17 16 21 21 C 1.50704 * 119.92388 * 179.97438 * 20 19 17 22 22 O 1.42905 * 109.46717 * 244.99577 * 21 20 19 23 23 Si 1.86299 * 109.46975 * 4.99405 * 21 20 19 24 24 C 1.37952 * 120.15506 * 359.73607 * 20 19 17 25 25 C 1.53006 * 109.47127 * 60.00361 * 10 9 8 26 26 C 1.52997 * 109.46964 * 299.99785 * 6 4 3 27 27 H 1.09000 * 109.46445 * 60.00436 * 1 2 3 28 28 H 1.08995 * 109.47141 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47005 * 300.00142 * 1 2 3 30 30 H 1.09002 * 109.46897 * 239.99378 * 2 1 3 31 31 H 1.09004 * 109.46340 * 120.00049 * 2 1 3 32 32 H 1.08996 * 109.47452 * 59.99790 * 8 6 4 33 33 H 1.09000 * 109.47054 * 299.99950 * 8 6 4 34 34 H 1.09002 * 109.47070 * 179.97438 * 9 8 6 35 35 H 1.08996 * 109.47407 * 59.99513 * 9 8 6 36 36 H 0.97002 * 120.00030 * 265.00025 * 12 10 9 37 37 H 1.07998 * 120.07702 * 359.97438 * 16 15 13 38 38 H 1.08000 * 119.85992 * 179.97438 * 19 17 16 39 39 H 1.08997 * 109.47151 * 124.99777 * 21 20 19 40 40 H 0.96698 * 113.99408 * 180.02562 * 22 21 20 41 41 H 1.48502 * 109.99966 * 178.68405 * 23 21 20 42 42 H 1.48501 * 110.00174 * 300.00224 * 23 21 20 43 43 H 1.08002 * 120.06254 * 180.25701 * 24 20 19 44 44 H 1.08993 * 109.46955 * 60.00011 * 25 10 9 45 45 H 1.09000 * 109.47050 * 179.97438 * 25 10 9 46 46 H 1.09002 * 109.47153 * 60.00001 * 26 6 4 47 47 H 1.08993 * 109.47194 * 300.00289 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9209 2.9373 -0.0012 7 1 3.5852 3.4697 0.8888 8 6 5.4488 2.8572 -0.0010 9 6 6.0336 4.2710 -0.0010 10 6 5.5622 5.0178 -1.2503 11 1 5.8981 4.4856 -2.1403 12 7 6.1227 6.3714 -1.2507 13 6 7.3578 6.5892 -1.7442 14 8 8.0065 5.6627 -2.1894 15 6 7.9231 7.9553 -1.7450 16 6 7.1807 9.0212 -1.2351 17 6 7.7150 10.2944 -1.2384 18 35 6.7110 11.7409 -0.5488 19 6 8.9841 10.5139 -1.7457 20 6 9.7247 9.4609 -2.2525 21 6 11.1053 9.7092 -2.8033 22 8 11.1162 9.4308 -4.2049 23 14 11.5759 11.4895 -2.5201 24 6 9.2042 8.1833 -2.2504 25 6 4.0342 5.0980 -1.2505 26 6 3.4490 3.6839 -1.2505 27 1 -0.3632 0.5138 -0.8901 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8934 -0.5139 -0.8900 31 1 1.8933 -0.5139 0.8901 32 1 5.7847 2.3246 -0.8907 33 1 5.7846 2.3254 0.8892 34 1 7.1221 4.2139 -0.0005 35 1 5.6976 4.8032 0.8888 36 1 5.6049 7.1108 -0.8957 37 1 6.1907 8.8506 -0.8388 38 1 9.3976 11.5116 -1.7466 39 1 11.8202 9.0597 -2.2983 40 1 11.9753 9.5691 -4.6266 41 1 12.9479 11.7395 -3.0303 42 1 10.6087 12.3854 -3.2036 43 1 9.7853 7.3618 -2.6426 44 1 3.6983 5.6302 -0.3606 45 1 3.6984 5.6305 -2.1403 46 1 2.3604 3.7410 -1.2501 47 1 3.7845 3.1514 -2.1403 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:28:14 Heat of formation + Delta-G solvation = -133.190508 kcal Electronic energy + Delta-G solvation = -30273.256510 eV Core-core repulsion = 25854.342359 eV Total energy + Delta-G solvation = -4418.914151 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.076 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.85268 -41.45650 -40.24220 -38.95406 -37.82182 -37.51868 -35.45663 -33.69007 -33.37252 -32.70124 -31.93960 -30.80990 -30.47613 -27.08329 -26.12002 -24.76468 -23.95371 -23.51382 -22.69830 -21.94642 -21.41108 -20.84558 -18.96943 -18.67189 -18.62885 -17.77829 -17.68315 -17.51018 -17.35536 -16.62899 -16.27223 -16.16529 -15.62522 -15.44320 -15.33056 -15.03669 -14.96745 -14.83053 -14.55486 -14.25464 -14.13672 -14.02769 -13.85670 -13.71263 -13.56622 -13.37430 -12.90488 -12.82242 -12.77763 -12.56739 -12.46704 -12.38546 -12.28462 -11.99207 -11.85094 -11.71347 -11.50399 -11.49497 -11.43977 -11.27559 -10.98350 -10.64990 -10.32419 -10.10906 -9.90711 -5.09373 -0.48833 -0.16259 0.40274 1.10766 1.23869 1.47023 1.59324 1.65260 1.82845 1.96486 2.48968 3.06762 3.30905 3.43647 3.49025 3.50540 3.57327 3.74517 3.81581 3.87542 3.95401 3.96898 3.99097 4.01657 4.06586 4.08830 4.20279 4.24019 4.28621 4.29727 4.30877 4.43599 4.52508 4.62495 4.72367 4.74812 4.80060 4.84447 4.88450 4.93307 4.95793 5.01098 5.07763 5.09091 5.16001 5.22895 5.34779 5.42205 5.51212 6.30700 6.35080 6.79269 7.09453 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.504 6.504 6 C -0.081 4.081 7 H 0.112 0.888 8 C -0.102 4.102 9 C -0.128 4.128 10 C 0.142 3.858 11 H 0.094 0.906 12 N -0.722 5.722 13 C 0.563 3.437 14 O -0.525 6.525 15 C -0.129 4.129 16 C -0.053 4.053 17 C -0.094 4.094 18 Br -0.033 7.033 19 C -0.062 4.062 20 C -0.072 4.072 21 C -0.076 4.076 22 O -0.533 6.533 23 Si 0.678 3.322 24 C -0.016 4.016 25 C -0.125 4.125 26 C -0.107 4.107 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.077 0.923 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.069 0.931 36 H 0.400 0.600 37 H 0.139 0.861 38 H 0.142 0.858 39 H 0.084 0.916 40 H 0.384 0.616 41 H -0.255 1.255 42 H -0.250 1.250 43 H 0.147 0.853 44 H 0.075 0.925 45 H 0.079 0.921 46 H 0.085 0.915 47 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.285 3.225 3.146 5.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.391 6.391 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.140 4.140 9 C -0.167 4.167 10 C 0.038 3.962 11 H 0.112 0.888 12 N -0.374 5.374 13 C 0.350 3.650 14 O -0.402 6.402 15 C -0.133 4.133 16 C -0.074 4.074 17 C -0.174 4.174 18 Br 0.053 6.947 19 C -0.082 4.082 20 C -0.073 4.073 21 C -0.185 4.185 22 O -0.341 6.341 23 Si 0.579 3.421 24 C -0.035 4.035 25 C -0.163 4.163 26 C -0.145 4.145 27 H 0.086 0.914 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.095 0.905 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.088 0.912 36 H 0.236 0.764 37 H 0.157 0.843 38 H 0.159 0.841 39 H 0.102 0.898 40 H 0.232 0.768 41 H -0.179 1.179 42 H -0.175 1.175 43 H 0.165 0.835 44 H 0.094 0.906 45 H 0.097 0.903 46 H 0.104 0.896 47 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -2.406 3.390 2.828 5.027 hybrid contribution 0.411 -0.634 -0.929 1.198 sum -1.994 2.755 1.898 3.895 Atomic orbital electron populations 1.21819 0.92347 1.03252 1.03618 1.23076 0.95569 0.79923 1.02740 1.86497 1.24456 1.32691 1.83834 1.23743 0.80658 0.92644 0.72282 1.90693 1.60452 1.43146 1.44841 1.21182 0.96893 0.89804 1.02080 0.87055 1.21413 0.91222 0.96941 1.04413 1.21938 1.01893 0.95051 0.97809 1.21110 0.92958 0.82303 0.99846 0.88796 1.45965 1.16979 1.10870 1.63568 1.18088 0.81437 0.87908 0.77571 1.90826 1.59531 1.44035 1.45793 1.19940 0.96092 0.93120 1.04104 1.21270 0.99449 0.90475 0.96206 1.21592 0.96326 0.93515 1.05925 1.96836 1.71180 1.41898 1.84773 1.21190 0.92268 0.99311 0.95390 1.19204 0.95505 0.92962 0.99627 1.24773 0.96489 1.12838 0.84446 1.86591 1.37763 1.89955 1.19778 0.95120 0.80127 0.74823 0.92076 1.21278 0.93221 0.97017 0.92034 1.21819 0.93578 0.97333 1.03601 1.21478 1.01783 0.94832 0.96405 0.91374 0.90041 0.91386 0.91124 0.91139 0.90464 0.90366 0.90431 0.91203 0.76434 0.84322 0.84051 0.89785 0.76775 1.17926 1.17474 0.83547 0.90616 0.90263 0.89614 0.90792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.16 0.38 0.64 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.49 10.12 -39.23 -0.40 -0.89 16 4 C 0.46 0.89 7.26 36.01 0.26 1.15 16 5 O -0.50 -2.58 15.73 -18.75 -0.29 -2.87 16 6 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 8 C -0.10 0.02 4.49 -26.73 -0.12 -0.10 16 9 C -0.13 0.13 5.49 -26.73 -0.15 -0.02 16 10 C 0.14 -0.17 2.45 -67.93 -0.17 -0.34 16 11 H 0.09 0.09 7.57 -51.93 -0.39 -0.30 16 12 N -0.72 0.94 5.03 -54.75 -0.28 0.67 16 13 C 0.56 0.98 7.74 -12.33 -0.10 0.89 16 14 O -0.53 -2.88 16.01 5.32 0.09 -2.79 16 15 C -0.13 -0.09 5.87 -104.97 -0.62 -0.71 16 16 C -0.05 0.05 9.28 -39.15 -0.36 -0.31 16 17 C -0.09 0.03 6.22 -39.57 -0.25 -0.22 16 18 Br -0.03 0.02 33.69 -68.01 -2.29 -2.27 16 19 C -0.06 0.01 8.40 -39.47 -0.33 -0.32 16 20 C -0.07 -0.03 5.38 -104.68 -0.56 -0.59 16 21 C -0.08 0.06 2.79 36.01 0.10 0.16 16 22 O -0.53 -0.32 12.81 -35.23 -0.45 -0.77 16 23 Si 0.68 -1.11 29.84 -169.99 -5.07 -6.18 16 24 C -0.02 -0.02 9.23 -39.18 -0.36 -0.38 16 25 C -0.13 0.41 5.39 -26.70 -0.14 0.27 16 26 C -0.11 0.25 5.14 -26.71 -0.14 0.11 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 32 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 33 H 0.08 0.04 8.10 -51.93 -0.42 -0.38 16 34 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.40 -1.57 6.64 -40.82 -0.27 -1.84 16 37 H 0.14 -0.50 6.40 -52.49 -0.34 -0.84 16 38 H 0.14 -0.20 4.85 -52.49 -0.25 -0.45 16 39 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 40 H 0.38 -1.30 8.74 45.56 0.40 -0.90 16 41 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 42 H -0.25 -0.33 7.05 56.52 0.40 0.07 16 43 H 0.15 0.30 7.65 -52.49 -0.40 -0.10 16 44 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 45 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 46 H 0.09 -0.23 8.11 -51.93 -0.42 -0.65 16 47 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 405.31 15.07 6.11 6.11 Total: 0.00 -8.95 405.31 -11.93 -20.88 By element: Atomic # 1 Polarization: -5.41 SS G_CDS: -6.78 Total: -12.20 kcal Atomic # 6 Polarization: 2.88 SS G_CDS: -2.56 Total: 0.32 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.28 Total: 0.67 kcal Atomic # 8 Polarization: -6.27 SS G_CDS: -1.06 Total: -7.33 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.07 Total: -6.18 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -8.95 -11.93 -20.88 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.308 kcal (2) G-P(sol) polarization free energy of solvation -8.949 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.934 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.883 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.191 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds