Wall clock time and date at job start Sun Mar 7 2021 02:28:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45196 * 109.47367 * 2 1 4 4 C 1.34220 * 116.99913 * 180.02562 * 3 2 1 5 5 O 1.20820 * 120.00497 * 359.97438 * 4 3 2 6 6 C 1.50712 * 120.00031 * 179.97438 * 4 3 2 7 7 H 1.09000 * 109.46559 * 59.99942 * 6 4 3 8 8 C 1.52996 * 109.47086 * 179.97438 * 6 4 3 9 9 C 1.53002 * 109.46972 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.46817 * 299.99733 * 9 8 6 11 11 H 1.09001 * 109.47502 * 300.00518 * 10 9 8 12 12 N 1.46500 * 109.47007 * 180.02562 * 10 9 8 13 13 C 1.34773 * 120.00050 * 85.00124 * 12 10 9 14 14 O 1.21555 * 120.00076 * 0.02562 * 13 12 10 15 15 C 1.47851 * 119.99772 * 179.97438 * 13 12 10 16 16 C 1.39544 * 120.14168 * 0.02562 * 15 13 12 17 17 C 1.38074 * 119.84149 * 179.97438 * 16 15 13 18 18 Br 1.89100 * 119.93607 * 179.97438 * 17 16 15 19 19 C 1.38422 * 120.12311 * 359.97438 * 17 16 15 20 20 C 1.38358 * 120.28586 * 0.02562 * 19 17 16 21 21 C 1.50704 * 119.92388 * 179.97438 * 20 19 17 22 22 O 1.42905 * 109.46717 * 244.99577 * 21 20 19 23 23 Si 1.86299 * 109.46975 * 4.99405 * 21 20 19 24 24 C 1.37952 * 120.15506 * 359.73607 * 20 19 17 25 25 C 1.53006 * 109.47127 * 60.00361 * 10 9 8 26 26 C 1.52997 * 109.46964 * 299.99785 * 6 4 3 27 27 H 1.09000 * 109.46445 * 60.00436 * 1 2 3 28 28 H 1.08995 * 109.47141 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47005 * 300.00142 * 1 2 3 30 30 H 1.09002 * 109.46897 * 239.99378 * 2 1 3 31 31 H 1.09004 * 109.46340 * 120.00049 * 2 1 3 32 32 H 1.08996 * 109.47452 * 59.99790 * 8 6 4 33 33 H 1.09000 * 109.47054 * 299.99950 * 8 6 4 34 34 H 1.09002 * 109.47070 * 179.97438 * 9 8 6 35 35 H 1.08996 * 109.47407 * 59.99513 * 9 8 6 36 36 H 0.97002 * 120.00030 * 265.00025 * 12 10 9 37 37 H 1.07998 * 120.07702 * 359.97438 * 16 15 13 38 38 H 1.08000 * 119.85992 * 179.97438 * 19 17 16 39 39 H 1.08997 * 109.47151 * 124.99777 * 21 20 19 40 40 H 0.96698 * 113.99408 * 180.02562 * 22 21 20 41 41 H 1.48502 * 109.99966 * 178.68405 * 23 21 20 42 42 H 1.48501 * 110.00174 * 300.00224 * 23 21 20 43 43 H 1.08002 * 120.06254 * 180.25701 * 24 20 19 44 44 H 1.08993 * 109.46955 * 60.00011 * 25 10 9 45 45 H 1.09000 * 109.47050 * 179.97438 * 25 10 9 46 46 H 1.09002 * 109.47153 * 60.00001 * 26 6 4 47 47 H 1.08993 * 109.47194 * 300.00289 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9209 2.9373 -0.0012 7 1 3.5852 3.4697 0.8888 8 6 5.4488 2.8572 -0.0010 9 6 6.0336 4.2710 -0.0010 10 6 5.5622 5.0178 -1.2503 11 1 5.8981 4.4856 -2.1403 12 7 6.1227 6.3714 -1.2507 13 6 7.3578 6.5892 -1.7442 14 8 8.0065 5.6627 -2.1894 15 6 7.9231 7.9553 -1.7450 16 6 7.1807 9.0212 -1.2351 17 6 7.7150 10.2944 -1.2384 18 35 6.7110 11.7409 -0.5488 19 6 8.9841 10.5139 -1.7457 20 6 9.7247 9.4609 -2.2525 21 6 11.1053 9.7092 -2.8033 22 8 11.1162 9.4308 -4.2049 23 14 11.5759 11.4895 -2.5201 24 6 9.2042 8.1833 -2.2504 25 6 4.0342 5.0980 -1.2505 26 6 3.4490 3.6839 -1.2505 27 1 -0.3632 0.5138 -0.8901 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8934 -0.5139 -0.8900 31 1 1.8933 -0.5139 0.8901 32 1 5.7847 2.3246 -0.8907 33 1 5.7846 2.3254 0.8892 34 1 7.1221 4.2139 -0.0005 35 1 5.6976 4.8032 0.8888 36 1 5.6049 7.1108 -0.8957 37 1 6.1907 8.8506 -0.8388 38 1 9.3976 11.5116 -1.7466 39 1 11.8202 9.0597 -2.2983 40 1 11.9753 9.5691 -4.6266 41 1 12.9479 11.7395 -3.0303 42 1 10.6087 12.3854 -3.2036 43 1 9.7853 7.3618 -2.6426 44 1 3.6983 5.6302 -0.3606 45 1 3.6984 5.6305 -2.1403 46 1 2.3604 3.7410 -1.2501 47 1 3.7845 3.1514 -2.1403 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:28:13 Heat of formation + Delta-G solvation = -130.528385 kcal Electronic energy + Delta-G solvation = -30273.141072 eV Core-core repulsion = 25854.342359 eV Total energy + Delta-G solvation = -4418.798713 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.076 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.93391 -41.54044 -40.24803 -38.99059 -37.81307 -37.68127 -35.53107 -33.67224 -33.37865 -32.67155 -31.84027 -30.77984 -30.44931 -27.03898 -26.14591 -24.77903 -23.85421 -23.49609 -22.68539 -21.96795 -21.45440 -20.82266 -18.95623 -18.74556 -18.64676 -17.80093 -17.71696 -17.59740 -17.39881 -16.61257 -16.30250 -16.20645 -15.63347 -15.41874 -15.28104 -15.02552 -15.01345 -14.82790 -14.59141 -14.25310 -14.10185 -14.03078 -13.80507 -13.65291 -13.49768 -13.25304 -12.93469 -12.83730 -12.80423 -12.53986 -12.44127 -12.34415 -12.18598 -12.00100 -11.84773 -11.66183 -11.55388 -11.50955 -11.37781 -11.37531 -11.09173 -10.60478 -10.35597 -10.08982 -9.89087 -4.98557 -0.50551 -0.14675 0.43427 1.09829 1.19699 1.52234 1.55878 1.61578 1.88459 1.97130 2.45873 3.15838 3.34524 3.47815 3.58324 3.60951 3.62698 3.79555 3.87553 3.90804 3.96491 3.99149 4.03919 4.07530 4.15363 4.17617 4.28364 4.30205 4.32204 4.33881 4.42438 4.50401 4.59968 4.75942 4.77116 4.83318 4.89552 4.91634 4.94751 5.03970 5.08942 5.10280 5.10393 5.15571 5.24800 5.25693 5.36252 5.42306 5.46775 6.39629 6.52099 6.65897 7.06756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.053 3.947 3 O -0.357 6.357 4 C 0.463 3.537 5 O -0.545 6.545 6 C -0.074 4.074 7 H 0.140 0.860 8 C -0.098 4.098 9 C -0.120 4.120 10 C 0.141 3.859 11 H 0.066 0.934 12 N -0.704 5.704 13 C 0.561 3.439 14 O -0.573 6.573 15 C -0.136 4.136 16 C -0.042 4.042 17 C -0.099 4.099 18 Br -0.026 7.026 19 C -0.065 4.065 20 C -0.079 4.079 21 C -0.088 4.088 22 O -0.557 6.557 23 Si 0.759 3.241 24 C -0.031 4.031 25 C -0.115 4.115 26 C -0.103 4.103 27 H 0.070 0.930 28 H 0.094 0.906 29 H 0.070 0.930 30 H 0.064 0.936 31 H 0.066 0.934 32 H 0.053 0.947 33 H 0.069 0.931 34 H 0.053 0.947 35 H 0.093 0.907 36 H 0.416 0.584 37 H 0.168 0.832 38 H 0.152 0.848 39 H 0.101 0.899 40 H 0.398 0.602 41 H -0.279 1.279 42 H -0.289 1.289 43 H 0.131 0.869 44 H 0.103 0.897 45 H 0.088 0.912 46 H 0.099 0.901 47 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.011 4.947 4.322 7.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.020 4.020 3 O -0.273 6.273 4 C 0.307 3.693 5 O -0.434 6.434 6 C -0.093 4.093 7 H 0.157 0.843 8 C -0.136 4.136 9 C -0.158 4.158 10 C 0.037 3.963 11 H 0.084 0.916 12 N -0.356 5.356 13 C 0.349 3.651 14 O -0.453 6.453 15 C -0.140 4.140 16 C -0.062 4.062 17 C -0.179 4.179 18 Br 0.060 6.940 19 C -0.084 4.084 20 C -0.080 4.080 21 C -0.197 4.197 22 O -0.368 6.368 23 Si 0.663 3.337 24 C -0.051 4.051 25 C -0.153 4.153 26 C -0.141 4.141 27 H 0.089 0.911 28 H 0.112 0.888 29 H 0.089 0.911 30 H 0.082 0.918 31 H 0.084 0.916 32 H 0.072 0.928 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.111 0.889 36 H 0.255 0.745 37 H 0.185 0.815 38 H 0.169 0.831 39 H 0.119 0.881 40 H 0.249 0.751 41 H -0.206 1.206 42 H -0.216 1.216 43 H 0.149 0.851 44 H 0.121 0.879 45 H 0.106 0.894 46 H 0.117 0.883 47 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -4.169 5.123 4.027 7.736 hybrid contribution 0.940 -1.187 -1.326 2.013 sum -3.228 3.936 2.701 5.763 Atomic orbital electron populations 1.21817 0.90510 1.04212 1.03868 1.23237 0.97017 0.79524 1.02272 1.86505 1.24120 1.33237 1.83464 1.24378 0.80569 0.93376 0.70939 1.90677 1.61261 1.44662 1.46843 1.21259 0.95682 0.88384 1.03940 0.84286 1.21326 0.92313 0.97117 1.02878 1.21844 1.00351 0.94760 0.98875 1.21097 0.94659 0.81981 0.98549 0.91577 1.45830 1.16019 1.11446 1.62294 1.18306 0.81920 0.87808 0.77092 1.90805 1.60930 1.45440 1.48117 1.19889 0.96153 0.93077 1.04919 1.21485 1.00218 0.89550 0.94988 1.21707 0.96353 0.93938 1.05864 1.96848 1.70900 1.41650 1.84641 1.21355 0.92472 0.99550 0.95026 1.19335 0.96196 0.92673 0.99807 1.25046 0.96367 1.14255 0.83998 1.86546 1.39300 1.90279 1.20646 0.94235 0.76788 0.72114 0.90585 1.21272 0.93806 0.97122 0.92882 1.21781 0.91202 0.96894 1.05396 1.21474 1.02522 0.95086 0.95052 0.91110 0.88763 0.91051 0.91752 0.91586 0.92800 0.91256 0.92845 0.88872 0.74489 0.81489 0.83055 0.88115 0.75093 1.20599 1.21647 0.85142 0.87875 0.89356 0.88279 0.92211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.58 10.29 71.98 0.74 1.32 16 2 C 0.05 0.06 6.19 71.98 0.45 0.51 16 3 O -0.36 -1.00 10.12 -51.32 -0.52 -1.52 16 4 C 0.46 2.10 7.26 71.24 0.52 2.61 16 5 O -0.54 -6.61 15.73 21.98 0.35 -6.27 16 6 C -0.07 0.19 2.63 -11.54 -0.03 0.16 16 7 H 0.14 -1.08 8.14 -2.39 -0.02 -1.10 16 8 C -0.10 -0.08 4.49 30.59 0.14 0.06 16 9 C -0.12 0.19 5.49 30.59 0.17 0.36 16 10 C 0.14 -0.33 2.45 44.99 0.11 -0.22 16 11 H 0.07 0.26 7.57 -2.39 -0.02 0.24 16 12 N -0.70 2.20 5.03 -445.40 -2.24 -0.04 16 13 C 0.56 2.51 7.74 86.79 0.67 3.18 16 14 O -0.57 -7.77 16.01 -3.89 -0.06 -7.83 16 15 C -0.14 -0.27 5.87 -20.09 -0.12 -0.38 16 16 C -0.04 0.13 9.28 22.55 0.21 0.34 16 17 C -0.10 0.15 6.22 22.27 0.14 0.29 16 18 Br -0.03 0.06 33.69 -20.37 -0.69 -0.62 16 19 C -0.06 0.03 8.40 22.34 0.19 0.22 16 20 C -0.08 -0.11 5.38 -19.90 -0.11 -0.22 16 21 C -0.09 0.10 2.79 71.24 0.20 0.30 16 22 O -0.56 -1.18 12.81 -148.98 -1.91 -3.09 16 23 Si 0.76 -2.44 29.84 68.60 2.05 -0.39 16 24 C -0.03 -0.13 9.23 22.53 0.21 0.08 16 25 C -0.12 0.97 5.39 30.61 0.17 1.13 16 26 C -0.10 0.56 5.14 30.61 0.16 0.72 16 27 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 28 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 29 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 30 H 0.06 0.14 8.13 -2.39 -0.02 0.12 16 31 H 0.07 0.12 8.13 -2.38 -0.02 0.10 16 32 H 0.05 0.29 8.10 -2.39 -0.02 0.27 16 33 H 0.07 0.17 8.10 -2.39 -0.02 0.15 16 34 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 35 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 36 H 0.42 -4.17 6.64 -92.71 -0.62 -4.78 16 37 H 0.17 -1.61 6.40 -2.91 -0.02 -1.63 16 38 H 0.15 -0.48 4.85 -2.91 -0.01 -0.50 16 39 H 0.10 -0.49 7.96 -2.39 -0.02 -0.51 16 40 H 0.40 -2.38 8.74 -74.06 -0.65 -3.03 16 41 H -0.28 -0.23 7.11 99.48 0.71 0.48 16 42 H -0.29 -0.93 7.05 99.48 0.70 -0.23 16 43 H 0.13 0.90 7.65 -2.91 -0.02 0.88 16 44 H 0.10 -1.34 8.14 -2.39 -0.02 -1.36 16 45 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 46 H 0.10 -0.73 8.11 -2.39 -0.02 -0.75 16 47 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 Total: 0.00 -24.17 405.31 0.56 -23.62 By element: Atomic # 1 Polarization: -14.09 SS G_CDS: -0.22 Total: -14.31 kcal Atomic # 6 Polarization: 6.66 SS G_CDS: 3.80 Total: 10.46 kcal Atomic # 7 Polarization: 2.20 SS G_CDS: -2.24 Total: -0.04 kcal Atomic # 8 Polarization: -16.56 SS G_CDS: -2.14 Total: -18.71 kcal Atomic # 14 Polarization: -2.44 SS G_CDS: 2.05 Total: -0.39 kcal Atomic # 35 Polarization: 0.06 SS G_CDS: -0.69 Total: -0.62 kcal Total: -24.17 0.56 -23.62 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.913 kcal (2) G-P(sol) polarization free energy of solvation -24.173 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.558 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.615 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.528 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds