Wall clock time and date at job start Sun Mar 7 2021 02:28:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45194 * 109.47456 * 2 1 4 4 C 1.34226 * 117.00487 * 180.02562 * 3 2 1 5 5 O 1.20828 * 119.99514 * 359.97438 * 4 3 2 6 6 C 1.50693 * 120.00533 * 180.02562 * 4 3 2 7 7 H 1.09002 * 109.47624 * 59.99295 * 6 4 3 8 8 C 1.53002 * 109.47531 * 179.97438 * 6 4 3 9 9 C 1.53000 * 109.47233 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47060 * 299.99657 * 9 8 6 11 11 H 1.09002 * 109.47153 * 300.00319 * 10 9 8 12 12 N 1.46500 * 109.47473 * 180.02562 * 10 9 8 13 13 C 1.34777 * 120.00270 * 154.99797 * 12 10 9 14 14 O 1.21699 * 119.99595 * 0.02562 * 13 12 10 15 15 C 1.46427 * 120.00351 * 180.02562 * 13 12 10 16 16 C 1.34800 * 120.00181 * 180.02562 * 15 13 12 17 17 C 1.47207 * 120.00053 * 180.02562 * 16 15 13 18 18 C 1.39840 * 120.16890 * 359.71905 * 17 16 15 19 19 C 1.37891 * 119.82628 * 179.81624 * 18 17 16 20 20 C 1.38404 * 120.16816 * 0.44028 * 19 18 17 21 21 C 1.50707 * 119.82531 * 179.76760 * 20 19 18 22 22 O 1.42899 * 109.46944 * 120.02375 * 21 20 19 23 23 Si 1.86305 * 109.47145 * 0.02562 * 21 20 19 24 24 C 1.38394 * 120.34755 * 359.79266 * 20 19 18 25 25 C 1.37887 * 120.17176 * 359.97438 * 24 20 19 26 26 C 1.52999 * 109.47317 * 59.99960 * 10 9 8 27 27 C 1.52997 * 109.46989 * 299.99591 * 6 4 3 28 28 H 1.08999 * 109.46933 * 59.99807 * 1 2 3 29 29 H 1.09000 * 109.47532 * 179.97438 * 1 2 3 30 30 H 1.09002 * 109.47319 * 300.00114 * 1 2 3 31 31 H 1.09002 * 109.47319 * 239.99886 * 2 1 3 32 32 H 1.08999 * 109.46933 * 120.00193 * 2 1 3 33 33 H 1.08992 * 109.47063 * 59.99724 * 8 6 4 34 34 H 1.09004 * 109.46733 * 299.99437 * 8 6 4 35 35 H 1.09002 * 109.47398 * 59.99826 * 9 8 6 36 36 H 1.09001 * 109.47194 * 180.02562 * 9 8 6 37 37 H 0.97000 * 119.99491 * 335.00093 * 12 10 9 38 38 H 1.08003 * 119.99459 * 359.97438 * 15 13 12 39 39 H 1.08003 * 120.00360 * 359.97438 * 16 15 13 40 40 H 1.08003 * 120.08579 * 0.02562 * 18 17 16 41 41 H 1.07993 * 119.91412 * 180.20979 * 19 18 17 42 42 H 1.09001 * 109.46700 * 240.02210 * 21 20 19 43 43 H 0.96699 * 113.99756 * 299.99886 * 22 21 20 44 44 H 1.48501 * 109.99748 * 58.68040 * 23 21 20 45 45 H 1.48499 * 109.99867 * 179.97438 * 23 21 20 46 46 H 1.08002 * 119.91967 * 179.97438 * 24 20 19 47 47 H 1.08001 * 120.08989 * 179.97438 * 25 24 20 48 48 H 1.09000 * 109.47486 * 180.02562 * 26 10 9 49 49 H 1.09002 * 109.46716 * 60.00091 * 26 10 9 50 50 H 1.09002 * 109.47153 * 299.99998 * 27 6 4 51 51 H 1.09001 * 109.47289 * 60.00082 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.5852 3.4690 0.8904 8 6 5.4487 2.8572 -0.0001 9 6 6.0335 4.2710 0.0011 10 6 5.5620 5.0190 -1.2475 11 1 5.8979 4.4876 -2.1380 12 7 6.1224 6.3726 -1.2468 13 6 6.2860 7.0349 -2.4091 14 8 5.9677 6.5087 -3.4593 15 6 6.8467 8.3876 -2.4084 16 6 7.0098 9.0502 -3.5709 17 6 7.5739 10.4099 -3.5703 18 6 7.9364 11.0197 -2.3652 19 6 8.4678 12.2921 -2.3731 20 6 8.6342 12.9690 -3.5688 21 6 9.2108 14.3614 -3.5680 22 8 10.4122 14.3798 -4.3415 23 14 9.5910 14.8751 -1.8180 24 6 8.2734 12.3740 -4.7652 25 6 7.7451 11.1004 -4.7742 26 6 4.0341 5.0991 -1.2475 27 6 3.4487 3.6849 -1.2486 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3634 0.5139 0.8900 31 1 1.8933 -0.5139 -0.8900 32 1 1.8933 -0.5139 0.8900 33 1 5.7846 2.3254 -0.8903 34 1 5.7847 2.3247 0.8897 35 1 5.6976 4.8024 0.8915 36 1 7.1220 4.2140 0.0005 37 1 6.3758 6.7921 -0.4097 38 1 7.1287 8.8547 -1.4764 39 1 6.7273 8.5833 -4.5030 40 1 7.8037 10.4942 -1.4310 41 1 8.7513 12.7631 -1.4436 42 1 8.4890 15.0537 -4.0014 43 1 11.1007 13.7856 -4.0129 44 1 10.5497 13.9207 -1.2055 45 1 10.1608 16.2463 -1.8037 46 1 8.4058 12.9087 -5.6942 47 1 7.4636 10.6375 -5.7085 48 1 3.6981 5.6316 -2.1373 49 1 3.6982 5.6305 -0.3571 50 1 3.7843 3.1532 -2.1390 51 1 2.3602 3.7420 -1.2481 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_12360594.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:28:24 Heat of formation + Delta-G solvation = -126.440680 kcal Electronic energy + Delta-G solvation = -30531.486133 eV Core-core repulsion = 26168.918920 eV Total energy + Delta-G solvation = -4362.567213 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.182 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.76573 -40.99590 -40.58779 -39.07255 -37.93301 -37.51028 -35.31928 -35.06413 -32.78862 -32.32207 -31.91447 -31.61963 -30.63237 -27.28511 -25.61588 -24.30693 -24.01635 -23.88124 -23.31977 -22.11807 -21.67951 -21.11466 -20.27921 -18.91695 -18.62269 -18.14422 -17.74566 -17.54203 -17.33992 -16.87830 -16.60812 -16.26574 -16.09450 -15.87358 -15.52182 -15.25958 -15.18945 -14.94968 -14.85838 -14.60967 -14.47526 -14.20927 -14.10066 -13.89791 -13.82765 -13.55321 -13.33381 -13.31157 -13.05622 -12.91168 -12.76075 -12.52051 -12.42227 -12.30624 -12.28880 -12.14682 -11.68388 -11.67805 -11.48752 -11.44675 -11.37390 -11.24888 -10.86467 -10.67017 -10.08278 -10.06666 -9.31026 -5.02857 -0.59233 0.30143 0.87517 1.21516 1.24117 1.53006 1.66474 1.90657 2.14612 2.28654 2.74828 3.28286 3.43147 3.45829 3.51307 3.57003 3.62579 3.73234 3.80957 3.85859 3.96848 3.99747 4.01339 4.08850 4.10950 4.15646 4.20374 4.24664 4.27435 4.30383 4.33376 4.37823 4.47986 4.56049 4.64499 4.74543 4.75779 4.81104 4.87205 4.88786 4.92304 5.00496 5.00910 5.02885 5.05522 5.07712 5.17536 5.23197 5.31060 5.39472 5.47875 5.52311 5.54532 5.80607 6.32540 6.50401 6.79334 7.25376 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.111 0.889 8 C -0.101 4.101 9 C -0.125 4.125 10 C 0.142 3.858 11 H 0.092 0.908 12 N -0.723 5.723 13 C 0.548 3.452 14 O -0.542 6.542 15 C -0.214 4.214 16 C -0.016 4.016 17 C -0.073 4.073 18 C -0.096 4.096 19 C -0.119 4.119 20 C -0.106 4.106 21 C -0.078 4.078 22 O -0.529 6.529 23 Si 0.685 3.315 24 C -0.095 4.095 25 C -0.092 4.092 26 C -0.127 4.127 27 C -0.108 4.108 28 H 0.067 0.933 29 H 0.081 0.919 30 H 0.067 0.933 31 H 0.070 0.930 32 H 0.070 0.930 33 H 0.077 0.923 34 H 0.079 0.921 35 H 0.073 0.927 36 H 0.078 0.922 37 H 0.401 0.599 38 H 0.130 0.870 39 H 0.138 0.862 40 H 0.132 0.868 41 H 0.130 0.870 42 H 0.120 0.880 43 H 0.377 0.623 44 H -0.260 1.260 45 H -0.256 1.256 46 H 0.131 0.869 47 H 0.132 0.868 48 H 0.076 0.924 49 H 0.070 0.930 50 H 0.072 0.928 51 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.431 2.227 4.668 5.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.139 4.139 9 C -0.163 4.163 10 C 0.037 3.963 11 H 0.110 0.890 12 N -0.374 5.374 13 C 0.338 3.662 14 O -0.421 6.421 15 C -0.235 4.235 16 C -0.035 4.035 17 C -0.073 4.073 18 C -0.113 4.113 19 C -0.136 4.136 20 C -0.107 4.107 21 C -0.187 4.187 22 O -0.335 6.335 23 Si 0.586 3.414 24 C -0.113 4.113 25 C -0.110 4.110 26 C -0.166 4.166 27 C -0.146 4.146 28 H 0.086 0.914 29 H 0.100 0.900 30 H 0.086 0.914 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.096 0.904 34 H 0.098 0.902 35 H 0.092 0.908 36 H 0.096 0.904 37 H 0.236 0.764 38 H 0.148 0.852 39 H 0.155 0.845 40 H 0.150 0.850 41 H 0.148 0.852 42 H 0.138 0.862 43 H 0.224 0.776 44 H -0.185 1.185 45 H -0.181 1.181 46 H 0.148 0.852 47 H 0.149 0.851 48 H 0.095 0.905 49 H 0.088 0.912 50 H 0.091 0.909 51 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -2.184 2.200 4.147 5.177 hybrid contribution 1.000 -0.587 -0.090 1.163 sum -1.184 1.613 4.057 4.523 Atomic orbital electron populations 1.21819 0.92345 1.03244 1.03647 1.23073 0.95587 0.79912 1.02719 1.86502 1.24442 1.32690 1.83777 1.23744 0.80676 0.92625 0.72183 1.90688 1.60471 1.43164 1.45022 1.21174 0.96693 0.89807 1.02279 0.87086 1.21392 0.91552 0.96503 1.04456 1.21814 1.01526 0.95500 0.97465 1.21054 0.93140 0.82369 0.99727 0.89037 1.45933 1.65256 1.17064 1.09119 1.18340 0.78064 0.86171 0.83661 1.90841 1.50821 1.69138 1.31256 1.22901 1.05930 0.95105 0.99570 1.22409 0.90795 0.91322 0.99016 1.19078 1.00590 0.93914 0.93699 1.21354 0.97579 0.94773 0.97638 1.20951 1.00409 0.95046 0.97207 1.20473 0.99694 0.96718 0.93767 1.25085 0.88836 0.96112 1.08712 1.86611 1.24969 1.67558 1.54354 0.95028 0.89501 0.80087 0.76818 1.20995 0.97399 0.94881 0.97999 1.21468 0.97568 0.94446 0.97545 1.21928 0.94797 0.96507 1.03327 1.21506 1.01739 0.95326 0.96061 0.91356 0.90036 0.91381 0.91122 0.91146 0.90422 0.90187 0.90839 0.90353 0.76424 0.85187 0.84472 0.85048 0.85222 0.86190 0.77584 1.18471 1.18134 0.85152 0.85052 0.90534 0.91163 0.90931 0.89923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.61 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.61 10.12 -39.25 -0.40 -1.00 16 4 C 0.47 0.95 7.25 36.00 0.26 1.21 16 5 O -0.51 -2.52 15.73 -18.75 -0.29 -2.81 16 6 C -0.08 0.07 2.63 -91.78 -0.24 -0.17 16 7 H 0.11 -0.28 8.14 -51.93 -0.42 -0.71 16 8 C -0.10 0.11 4.49 -26.73 -0.12 -0.01 16 9 C -0.13 0.34 5.39 -26.73 -0.14 0.19 16 10 C 0.14 -0.15 2.45 -67.93 -0.17 -0.31 16 11 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 12 N -0.72 1.08 5.07 -55.20 -0.28 0.80 16 13 C 0.55 0.70 7.71 -12.96 -0.10 0.60 16 14 O -0.54 -2.91 15.89 5.19 0.08 -2.83 16 15 C -0.21 0.18 9.41 -37.51 -0.35 -0.18 16 16 C -0.02 0.00 9.46 -37.16 -0.35 -0.35 16 17 C -0.07 0.03 5.87 -105.06 -0.62 -0.59 16 18 C -0.10 0.13 9.41 -39.11 -0.37 -0.23 16 19 C -0.12 0.17 8.65 -39.65 -0.34 -0.17 16 20 C -0.11 0.07 5.40 -104.50 -0.56 -0.50 16 21 C -0.08 0.07 2.82 36.01 0.10 0.17 16 22 O -0.53 -0.37 12.76 -35.23 -0.45 -0.82 16 23 Si 0.68 -1.11 29.77 -169.99 -5.06 -6.17 16 24 C -0.09 0.02 9.59 -39.65 -0.38 -0.36 16 25 C -0.09 0.03 9.80 -39.11 -0.38 -0.35 16 26 C -0.13 0.15 5.50 -26.70 -0.15 0.00 16 27 C -0.11 0.11 5.14 -26.70 -0.14 -0.02 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 31 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 32 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 33 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 34 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 35 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 36 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 37 H 0.40 -1.74 8.58 -40.82 -0.35 -2.09 16 38 H 0.13 -0.48 6.07 -52.48 -0.32 -0.80 16 39 H 0.14 0.09 7.52 -52.48 -0.39 -0.30 16 40 H 0.13 -0.48 6.17 -52.48 -0.32 -0.80 16 41 H 0.13 -0.42 4.85 -52.49 -0.25 -0.67 16 42 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 43 H 0.38 -0.77 8.70 45.56 0.40 -0.37 16 44 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 45 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 46 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 47 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 48 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 49 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 50 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 51 H 0.08 -0.10 8.11 -51.93 -0.42 -0.52 16 LS Contribution 418.42 15.07 6.31 6.31 Total: 0.00 -9.29 418.42 -11.54 -20.84 By element: Atomic # 1 Polarization: -6.10 SS G_CDS: -8.01 Total: -14.11 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -3.44 Total: -0.20 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.28 Total: 0.80 kcal Atomic # 8 Polarization: -6.41 SS G_CDS: -1.06 Total: -7.47 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.06 Total: -6.17 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -9.29 -11.54 -20.84 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12360594.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.605 kcal (2) G-P(sol) polarization free energy of solvation -9.292 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.544 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.441 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds