Wall clock time and date at job start Sun Mar 7 2021 02:28:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45208 * 109.46666 * 2 1 4 4 C 1.34232 * 116.99618 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00236 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00079 * 180.02562 * 4 3 2 7 7 H 1.08998 * 109.46862 * 300.00390 * 6 4 3 8 8 C 1.53006 * 109.47239 * 59.99547 * 6 4 3 9 9 C 1.52997 * 109.47164 * 180.02562 * 8 6 4 10 10 C 1.53002 * 109.46978 * 299.99874 * 9 8 6 11 11 H 1.08992 * 109.47056 * 300.00064 * 10 9 8 12 12 N 1.46505 * 109.46958 * 180.02562 * 10 9 8 13 13 C 1.34777 * 119.99797 * 84.99979 * 12 10 9 14 14 O 1.21565 * 119.99841 * 0.02562 * 13 12 10 15 15 C 1.47695 * 119.99755 * 179.97438 * 13 12 10 16 16 C 1.39804 * 120.15062 * 179.72479 * 15 13 12 17 17 F 1.35096 * 120.08736 * 0.02562 * 16 15 13 18 18 C 1.38319 * 119.82828 * 179.79716 * 16 15 13 19 19 C 1.38189 * 120.14287 * 0.46159 * 18 16 15 20 20 C 1.50700 * 119.83881 * 179.76770 * 19 18 16 21 21 O 1.42900 * 109.47246 * 255.02415 * 20 19 18 22 22 Si 1.86300 * 109.47253 * 15.02505 * 20 19 18 23 23 C 1.38648 * 120.31537 * 359.79346 * 19 18 16 24 24 F 1.35107 * 119.91400 * 179.97438 * 23 19 18 25 25 C 1.38070 * 120.16999 * 359.97438 * 23 19 18 26 26 C 1.52996 * 109.46891 * 60.00410 * 10 9 8 27 27 C 1.52997 * 109.47466 * 179.97438 * 6 4 3 28 28 H 1.08992 * 109.47077 * 59.99823 * 1 2 3 29 29 H 1.09003 * 109.46618 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.46939 * 299.99720 * 1 2 3 31 31 H 1.08998 * 109.47407 * 240.00533 * 2 1 3 32 32 H 1.08996 * 109.47314 * 119.99461 * 2 1 3 33 33 H 1.09001 * 109.47002 * 60.00070 * 8 6 4 34 34 H 1.09000 * 109.47050 * 300.00336 * 8 6 4 35 35 H 1.09002 * 109.47045 * 180.02562 * 9 8 6 36 36 H 1.09001 * 109.47375 * 59.99966 * 9 8 6 37 37 H 0.97001 * 119.99745 * 265.00017 * 12 10 9 38 38 H 1.07999 * 119.92641 * 180.23333 * 18 16 15 39 39 H 1.09006 * 109.47339 * 135.02383 * 20 19 18 40 40 H 0.96694 * 114.00206 * 60.00052 * 21 20 19 41 41 H 1.48498 * 110.00017 * 58.67908 * 22 20 19 42 42 H 1.48504 * 110.00053 * 179.97438 * 22 20 19 43 43 H 1.07996 * 120.07683 * 180.02562 * 25 23 19 44 44 H 1.09004 * 109.47368 * 179.97438 * 26 10 9 45 45 H 1.09001 * 109.47372 * 59.99964 * 26 10 9 46 46 H 1.09002 * 109.47153 * 59.99773 * 27 6 4 47 47 H 1.09001 * 109.46832 * 299.99964 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3691 0.0000 4 6 3.3447 1.5450 -0.0005 5 8 4.0808 0.5868 -0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.5843 3.4702 -0.8895 8 6 3.4497 3.6838 1.2499 9 6 4.0339 5.0978 1.2501 10 6 5.5619 5.0183 1.2492 11 1 5.8985 4.4859 2.1387 12 7 6.1214 6.3723 1.2500 13 6 6.2854 7.0329 2.4132 14 8 5.9695 6.5051 3.4618 15 6 6.8499 8.3977 2.4141 16 6 7.0161 9.0881 3.6184 17 9 6.6610 8.5085 4.7859 18 6 7.5493 10.3643 3.6118 19 6 7.9085 10.9602 2.4179 20 6 8.4840 12.3530 2.4182 21 8 7.4957 13.2769 1.9582 22 14 9.0037 12.8097 4.1480 23 6 7.7413 10.2830 1.2196 24 9 8.0947 10.8736 0.0570 25 6 7.2147 9.0067 1.2115 26 6 6.0329 4.2721 -0.0007 27 6 5.4486 2.8575 -0.0001 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8934 -0.5137 -0.8900 32 1 1.8934 -0.5137 0.8900 33 1 3.7860 3.1512 2.1395 34 1 2.3611 3.7408 1.2504 35 1 3.6987 5.6293 2.1408 36 1 3.6973 5.6303 0.3606 37 1 6.3737 6.7932 0.4133 38 1 7.6819 10.8977 4.5415 39 1 9.3501 12.3885 1.7573 40 1 6.6952 13.2989 2.5002 41 1 10.0080 11.8378 4.6499 42 1 9.5736 14.1810 4.1617 43 1 7.0856 8.4805 0.2773 44 1 7.1214 4.2157 -0.0017 45 1 5.6962 4.8045 -0.8903 46 1 5.7845 2.3257 -0.8903 47 1 5.7846 2.3250 0.8896 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_12360598.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:28:27 Heat of formation + Delta-G solvation = -221.369736 kcal Electronic energy + Delta-G solvation = -33445.485777 eV Core-core repulsion = 28423.657940 eV Total energy + Delta-G solvation = -5021.827838 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.147 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -50.10243 -50.08315 -41.91166 -41.38528 -40.12421 -39.03111 -37.71737 -37.59726 -35.53156 -33.49805 -32.70037 -31.84233 -31.36278 -30.85659 -27.82415 -25.60929 -24.39110 -24.07301 -23.83004 -23.32119 -22.07996 -21.69590 -20.97216 -19.62069 -18.84638 -18.70759 -18.62591 -17.92705 -17.67460 -17.61780 -17.34338 -17.08160 -16.86846 -16.56306 -16.12147 -16.07555 -15.86695 -15.63372 -15.49469 -15.26515 -15.14704 -14.95224 -14.70665 -14.52081 -14.19979 -14.11778 -13.85379 -13.78251 -13.50468 -13.28183 -13.13070 -13.00580 -12.94462 -12.78885 -12.53043 -12.40603 -12.34074 -12.19789 -12.17279 -11.63515 -11.54644 -11.47751 -11.40065 -11.12759 -10.61094 -10.57605 -10.18269 -9.81422 -5.05530 -0.80066 -0.29857 1.09033 1.16051 1.40638 1.61561 1.62040 1.86165 1.93541 2.25723 2.79850 2.85504 3.12680 3.30018 3.43240 3.49323 3.55422 3.59234 3.64707 3.81518 3.89984 3.96356 4.02637 4.06254 4.15645 4.17930 4.28238 4.30821 4.31345 4.32185 4.35067 4.42490 4.53635 4.60699 4.70009 4.74158 4.75144 4.82341 4.88208 4.92524 5.03980 5.08164 5.09447 5.14627 5.22972 5.25029 5.37774 5.41070 5.45610 6.34042 6.65109 6.68539 7.02025 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.463 3.537 5 O -0.542 6.542 6 C -0.074 4.074 7 H 0.139 0.861 8 C -0.103 4.103 9 C -0.120 4.120 10 C 0.142 3.858 11 H 0.068 0.932 12 N -0.702 5.702 13 C 0.558 3.442 14 O -0.559 6.559 15 C -0.148 4.148 16 C 0.140 3.860 17 F -0.123 7.123 18 C -0.121 4.121 19 C -0.098 4.098 20 C -0.077 4.077 21 O -0.546 6.546 22 Si 0.777 3.223 23 C 0.099 3.901 24 F -0.130 7.130 25 C -0.077 4.077 26 C -0.115 4.115 27 C -0.099 4.099 28 H 0.070 0.930 29 H 0.095 0.905 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.064 0.936 33 H 0.056 0.944 34 H 0.087 0.913 35 H 0.057 0.943 36 H 0.094 0.906 37 H 0.417 0.583 38 H 0.180 0.820 39 H 0.114 0.886 40 H 0.399 0.601 41 H -0.281 1.281 42 H -0.290 1.290 43 H 0.182 0.818 44 H 0.084 0.916 45 H 0.102 0.898 46 H 0.080 0.920 47 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.096 2.860 -3.247 5.320 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.431 6.431 6 C -0.093 4.093 7 H 0.156 0.844 8 C -0.141 4.141 9 C -0.159 4.159 10 C 0.038 3.962 11 H 0.086 0.914 12 N -0.354 5.354 13 C 0.345 3.655 14 O -0.439 6.439 15 C -0.153 4.153 16 C 0.119 3.881 17 F -0.101 7.101 18 C -0.139 4.139 19 C -0.099 4.099 20 C -0.186 4.186 21 O -0.354 6.354 22 Si 0.681 3.319 23 C 0.079 3.921 24 F -0.108 7.108 25 C -0.096 4.096 26 C -0.152 4.152 27 C -0.137 4.137 28 H 0.089 0.911 29 H 0.113 0.887 30 H 0.087 0.913 31 H 0.086 0.914 32 H 0.083 0.917 33 H 0.075 0.925 34 H 0.106 0.894 35 H 0.076 0.924 36 H 0.112 0.888 37 H 0.255 0.745 38 H 0.197 0.803 39 H 0.132 0.868 40 H 0.250 0.750 41 H -0.208 1.208 42 H -0.218 1.218 43 H 0.199 0.801 44 H 0.103 0.897 45 H 0.120 0.880 46 H 0.098 0.902 47 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -2.050 2.482 -2.460 4.051 hybrid contribution 0.433 -0.585 -0.701 1.010 sum -1.617 1.897 -3.161 4.025 Atomic orbital electron populations 1.21821 0.90667 1.04230 1.03773 1.23237 0.96944 0.79474 1.02351 1.86518 1.24352 1.33323 1.83468 1.24373 0.80527 0.93406 0.70962 1.90671 1.61138 1.44545 1.46794 1.21271 0.96577 0.88198 1.03273 0.84359 1.21428 1.02028 0.95204 0.95424 1.21853 0.94187 0.96305 1.03549 1.21101 0.93537 0.81630 0.99971 0.91401 1.45804 1.64025 1.16951 1.08666 1.18058 0.78074 0.85044 0.84322 1.90876 1.51460 1.68890 1.32628 1.19851 1.06605 0.95730 0.93087 1.17815 0.97397 0.91837 0.81014 1.91611 1.88832 1.84217 1.45407 1.20991 1.00224 0.93313 0.99371 1.20564 0.99565 0.98184 0.91617 1.25247 0.94819 0.85045 1.13522 1.86553 1.31183 1.59749 1.57959 0.93817 0.85596 0.77111 0.75372 1.17403 1.01019 0.92046 0.81582 1.91569 1.89486 1.83772 1.45999 1.21346 0.96294 0.93188 0.98746 1.21767 1.01879 0.94320 0.97261 1.21368 0.91531 0.97284 1.03551 0.91070 0.88655 0.91325 0.91353 0.91739 0.92515 0.89424 0.92386 0.88790 0.74451 0.80289 0.86844 0.75020 1.20752 1.21761 0.80091 0.89692 0.88001 0.90184 0.92371 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.50 10.29 71.98 0.74 1.24 16 2 C 0.05 0.07 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.21 10.12 -51.44 -0.52 -1.73 16 4 C 0.46 1.94 7.26 71.23 0.52 2.45 16 5 O -0.54 -5.89 15.73 21.97 0.35 -5.55 16 6 C -0.07 0.22 2.63 -11.54 -0.03 0.19 16 7 H 0.14 -1.12 8.14 -2.39 -0.02 -1.14 16 8 C -0.10 0.28 5.13 30.60 0.16 0.44 16 9 C -0.12 0.46 5.49 30.59 0.17 0.63 16 10 C 0.14 -0.48 2.45 44.99 0.11 -0.37 16 11 H 0.07 0.19 7.57 -2.39 -0.02 0.17 16 12 N -0.70 3.22 5.03 -445.56 -2.24 0.98 16 13 C 0.56 1.56 7.73 86.74 0.67 2.23 16 14 O -0.56 -6.77 15.00 -3.92 -0.06 -6.83 16 15 C -0.15 0.07 5.88 -20.06 -0.12 -0.05 16 16 C 0.14 0.17 7.28 22.67 0.17 0.34 16 17 F -0.12 -0.86 15.55 44.97 0.70 -0.17 16 18 C -0.12 0.49 8.62 22.28 0.19 0.68 16 19 C -0.10 0.34 5.27 -19.78 -0.10 0.23 16 20 C -0.08 0.27 2.44 71.24 0.17 0.44 16 21 O -0.55 1.49 12.88 -148.98 -1.92 -0.43 16 22 Si 0.78 -3.97 29.90 68.60 2.05 -1.92 16 23 C 0.10 -0.25 7.23 22.33 0.16 -0.08 16 24 F -0.13 -0.09 16.73 44.97 0.75 0.66 16 25 C -0.08 0.42 9.52 22.57 0.21 0.63 16 26 C -0.11 0.89 5.39 30.61 0.17 1.05 16 27 C -0.10 0.30 4.50 30.61 0.14 0.44 16 28 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 29 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 30 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 31 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 32 H 0.06 0.15 8.13 -2.39 -0.02 0.13 16 33 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 34 H 0.09 -0.29 8.11 -2.39 -0.02 -0.31 16 35 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 36 H 0.09 -0.76 8.14 -2.39 -0.02 -0.77 16 37 H 0.42 -4.84 6.64 -92.71 -0.62 -5.46 16 38 H 0.18 -1.67 5.10 -2.91 -0.01 -1.68 16 39 H 0.11 -0.21 7.89 -2.38 -0.02 -0.23 16 40 H 0.40 -4.63 8.70 -74.06 -0.64 -5.27 16 41 H -0.28 -0.02 7.11 99.48 0.71 0.69 16 42 H -0.29 -0.70 7.11 99.48 0.71 0.01 16 43 H 0.18 -2.25 6.40 -2.91 -0.02 -2.27 16 44 H 0.08 -0.69 8.14 -2.39 -0.02 -0.70 16 45 H 0.10 -1.28 8.14 -2.39 -0.02 -1.30 16 46 H 0.08 -0.19 8.10 -2.39 -0.02 -0.21 16 47 H 0.06 0.07 8.10 -2.39 -0.02 0.05 16 Total: 0.00 -25.92 394.63 2.69 -23.23 By element: Atomic # 1 Polarization: -19.09 SS G_CDS: -0.19 Total: -19.28 kcal Atomic # 6 Polarization: 7.26 SS G_CDS: 3.77 Total: 11.02 kcal Atomic # 7 Polarization: 3.22 SS G_CDS: -2.24 Total: 0.98 kcal Atomic # 8 Polarization: -12.39 SS G_CDS: -2.15 Total: -14.54 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 1.45 Total: 0.50 kcal Atomic # 14 Polarization: -3.97 SS G_CDS: 2.05 Total: -1.92 kcal Total: -25.92 2.69 -23.23 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12360598.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -198.140 kcal (2) G-P(sol) polarization free energy of solvation -25.919 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.689 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -221.370 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds