Wall clock time and date at job start Sun Mar 7 2021 02:28:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45203 * 109.46699 * 2 1 4 4 C 1.34227 * 116.99701 * 180.02562 * 3 2 1 5 5 O 1.20831 * 120.00113 * 359.97438 * 4 3 2 6 6 C 1.50708 * 120.00200 * 179.97438 * 4 3 2 7 7 H 1.09002 * 109.46846 * 299.99862 * 6 4 3 8 8 C 1.53002 * 109.46682 * 59.99819 * 6 4 3 9 9 C 1.53005 * 109.46845 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47149 * 300.00081 * 9 8 6 11 11 H 1.09002 * 109.47077 * 299.99720 * 10 9 8 12 12 N 1.46495 * 109.47325 * 179.97438 * 10 9 8 13 13 C 1.34779 * 119.99996 * 84.99834 * 12 10 9 14 14 O 1.21588 * 119.99948 * 0.02562 * 13 12 10 15 15 C 1.47538 * 119.99894 * 180.02562 * 13 12 10 16 16 C 1.40145 * 120.18908 * 179.97438 * 15 13 12 17 17 O 1.35651 * 120.14902 * 359.70229 * 16 15 13 18 18 C 1.42898 * 117.00125 * 180.02562 * 17 16 15 19 19 C 1.38704 * 119.69772 * 179.72285 * 16 15 13 20 20 C 1.38053 * 120.08771 * 359.97438 * 19 16 15 21 21 C 1.38550 * 120.38759 * 0.02562 * 20 19 16 22 22 C 1.50707 * 119.84971 * 179.97438 * 21 20 19 23 23 O 1.42901 * 109.46968 * 245.00354 * 22 21 20 24 24 Si 1.86301 * 109.46818 * 4.99686 * 22 21 20 25 25 C 1.37786 * 120.30372 * 359.97438 * 21 20 19 26 26 C 1.53001 * 109.47201 * 59.99830 * 10 9 8 27 27 C 1.52994 * 109.47066 * 179.97438 * 6 4 3 28 28 H 1.09004 * 109.46896 * 300.00030 * 1 2 3 29 29 H 1.08995 * 109.47448 * 60.00084 * 1 2 3 30 30 H 1.09000 * 109.47065 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.47303 * 240.00481 * 2 1 3 32 32 H 1.09000 * 109.47415 * 119.99440 * 2 1 3 33 33 H 1.09001 * 109.47450 * 299.99860 * 8 6 4 34 34 H 1.09002 * 109.47445 * 60.00410 * 8 6 4 35 35 H 1.09000 * 109.46932 * 179.97438 * 9 8 6 36 36 H 1.09002 * 109.46903 * 59.99908 * 9 8 6 37 37 H 0.97002 * 120.00683 * 265.00492 * 12 10 9 38 38 H 1.09004 * 109.47416 * 59.99348 * 18 17 16 39 39 H 1.08998 * 109.47362 * 179.97438 * 18 17 16 40 40 H 1.09002 * 109.47019 * 300.00266 * 18 17 16 41 41 H 1.07999 * 119.95565 * 180.02562 * 19 16 15 42 42 H 1.07998 * 119.80976 * 180.02562 * 20 19 16 43 43 H 1.08996 * 109.46865 * 124.99545 * 22 21 20 44 44 H 0.96692 * 114.00384 * 59.99439 * 23 22 21 45 45 H 1.48497 * 109.99702 * 180.02562 * 24 22 21 46 46 H 1.48493 * 110.00394 * 301.31837 * 24 22 21 47 47 H 1.07993 * 120.04990 * 180.02562 * 25 21 20 48 48 H 1.09002 * 109.47195 * 59.99962 * 26 10 9 49 49 H 1.09001 * 109.47337 * 180.02562 * 26 10 9 50 50 H 1.09000 * 109.47355 * 60.00325 * 27 6 4 51 51 H 1.09002 * 109.47387 * 299.99790 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0005 6 6 3.9206 2.9376 -0.0012 7 1 3.5844 3.4694 -0.8912 8 6 3.4495 3.6848 1.2481 9 6 4.0338 5.0989 1.2472 10 6 5.5617 5.0194 1.2463 11 1 5.8983 4.4878 2.1364 12 7 6.1211 6.3733 1.2448 13 6 6.2851 7.0360 2.4070 14 8 5.9691 6.5099 3.4566 15 6 6.8481 8.3998 2.4054 16 6 7.0198 9.0927 3.6114 17 8 6.6635 8.5149 4.7858 18 6 6.8673 9.2817 5.9743 19 6 7.5553 10.3721 3.5986 20 6 7.9175 10.9588 2.4026 21 6 7.7493 10.2770 1.2082 22 6 8.1484 10.9293 -0.0905 23 8 6.9860 11.1397 -0.8947 24 14 8.9642 12.5667 0.2620 25 6 7.2189 9.0054 1.2023 26 6 6.0328 4.2721 -0.0028 27 6 5.4485 2.8575 -0.0010 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 1.8933 -0.5137 -0.8900 32 1 1.8934 -0.5137 0.8900 33 1 2.3609 3.7419 1.2484 34 1 3.7857 3.1530 2.1381 35 1 3.6977 5.6314 2.1369 36 1 3.6971 5.6305 0.3571 37 1 6.3735 6.7930 0.4075 38 1 6.2900 10.2044 5.9148 39 1 6.5411 8.7046 6.8395 40 1 7.9258 9.5214 6.0750 41 1 7.6899 10.9097 4.5255 42 1 8.3345 11.9550 2.3978 43 1 8.8462 10.2827 -0.6224 44 1 6.3203 11.7074 -0.4830 45 1 9.3619 13.2203 -1.0106 46 1 8.0342 13.4460 1.0150 47 1 7.0899 8.4776 0.2690 48 1 5.6962 4.8037 -0.8929 49 1 7.1213 4.2150 -0.0032 50 1 5.7845 2.3250 -0.8908 51 1 5.7844 2.3258 0.8892 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_12496546.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:28:33 Heat of formation + Delta-G solvation = -170.189780 kcal Electronic energy + Delta-G solvation = -33116.895786 eV Core-core repulsion = 28561.975418 eV Total energy + Delta-G solvation = -4554.920368 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.85907 -41.59069 -40.36757 -39.25241 -38.82082 -37.47114 -37.25763 -35.21133 -33.02524 -32.60105 -31.91564 -31.85986 -30.60286 -28.59033 -26.24260 -25.93824 -24.78285 -23.87581 -23.62098 -22.62782 -21.78332 -21.38524 -20.79388 -19.51505 -18.60316 -18.46790 -18.09772 -17.64809 -17.50994 -17.27005 -16.86143 -16.69157 -16.25355 -16.10671 -15.90841 -15.86135 -15.46888 -15.17483 -14.89745 -14.82524 -14.58801 -14.54568 -14.38063 -14.07680 -13.82997 -13.65265 -13.52815 -13.41329 -13.25745 -13.18250 -12.87970 -12.71898 -12.49064 -12.46698 -12.34897 -12.26782 -12.23539 -12.10747 -11.71525 -11.61970 -11.45728 -11.39093 -11.20220 -10.87390 -10.52542 -10.23355 -9.95303 -9.30178 -5.04573 -0.25675 0.17839 1.19618 1.27522 1.49854 1.69713 1.86866 1.89601 2.15214 2.21322 2.72627 3.27597 3.46461 3.49074 3.54041 3.58400 3.63441 3.66730 3.90249 3.96094 3.99332 4.02661 4.05569 4.06402 4.17021 4.18728 4.19126 4.25989 4.31608 4.32633 4.33532 4.38686 4.48576 4.56286 4.61363 4.64250 4.69110 4.77713 4.83222 4.86409 4.94195 4.97558 5.03758 5.04915 5.08344 5.10507 5.21894 5.23168 5.29386 5.48031 5.53086 5.57372 6.27791 6.31601 6.58046 6.82641 7.36843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.108 4.108 9 C -0.127 4.127 10 C 0.144 3.856 11 H 0.092 0.908 12 N -0.728 5.728 13 C 0.562 3.438 14 O -0.514 6.514 15 C -0.175 4.175 16 C 0.193 3.807 17 O -0.279 6.279 18 C 0.019 3.981 19 C -0.214 4.214 20 C -0.049 4.049 21 C -0.167 4.167 22 C -0.068 4.068 23 O -0.530 6.530 24 Si 0.683 3.317 25 C -0.019 4.019 26 C -0.126 4.126 27 C -0.100 4.100 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.081 0.919 31 H 0.070 0.930 32 H 0.070 0.930 33 H 0.081 0.919 34 H 0.072 0.928 35 H 0.076 0.924 36 H 0.069 0.931 37 H 0.398 0.602 38 H 0.058 0.942 39 H 0.105 0.895 40 H 0.059 0.941 41 H 0.141 0.859 42 H 0.134 0.866 43 H 0.119 0.881 44 H 0.376 0.624 45 H -0.256 1.256 46 H -0.260 1.260 47 H 0.135 0.865 48 H 0.073 0.927 49 H 0.078 0.922 50 H 0.079 0.921 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.937 3.863 -0.267 3.984 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.146 4.146 9 C -0.166 4.166 10 C 0.040 3.960 11 H 0.110 0.890 12 N -0.380 5.380 13 C 0.350 3.650 14 O -0.390 6.390 15 C -0.179 4.179 16 C 0.144 3.856 17 O -0.189 6.189 18 C -0.076 4.076 19 C -0.233 4.233 20 C -0.067 4.067 21 C -0.168 4.168 22 C -0.178 4.178 23 O -0.336 6.336 24 Si 0.585 3.415 25 C -0.038 4.038 26 C -0.164 4.164 27 C -0.138 4.138 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.100 0.900 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.100 0.900 34 H 0.091 0.909 35 H 0.095 0.905 36 H 0.088 0.912 37 H 0.233 0.767 38 H 0.076 0.924 39 H 0.123 0.877 40 H 0.078 0.922 41 H 0.158 0.842 42 H 0.151 0.849 43 H 0.137 0.863 44 H 0.224 0.776 45 H -0.181 1.181 46 H -0.185 1.185 47 H 0.153 0.847 48 H 0.091 0.909 49 H 0.097 0.903 50 H 0.098 0.902 51 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.112 3.431 0.043 3.607 hybrid contribution -0.993 0.352 -0.465 1.151 sum 0.119 3.783 -0.422 3.808 Atomic orbital electron populations 1.21819 0.92374 1.03225 1.03638 1.23071 0.95570 0.79945 1.02709 1.86507 1.24469 1.32651 1.83791 1.23757 0.80657 0.92636 0.72159 1.90687 1.60455 1.43169 1.45036 1.21182 0.96730 0.89774 1.02285 0.87102 1.21495 1.01697 0.95352 0.96040 1.21925 0.94897 0.96453 1.03333 1.21029 0.93054 0.82192 0.99709 0.88965 1.45962 1.66004 1.17086 1.08971 1.17942 0.78235 0.84989 0.83873 1.90848 1.49293 1.68061 1.30800 1.19356 1.10615 0.96179 0.91724 1.19103 0.90122 0.90406 0.85943 1.86383 1.77800 1.42248 1.12471 1.23236 1.01517 0.97046 0.85837 1.21230 1.06926 0.95305 0.99832 1.21040 0.95039 0.99043 0.91549 1.20055 1.05419 0.95944 0.95339 1.24932 0.92012 1.09845 0.91059 1.86600 1.29808 1.71745 1.45485 0.95017 0.87751 0.75733 0.83033 1.20974 0.92908 0.93745 0.96162 1.21832 1.01570 0.95475 0.97486 1.21399 0.91513 0.96492 1.04438 0.91365 0.91394 0.90048 0.91153 0.91124 0.89989 0.90911 0.90521 0.91223 0.76672 0.92385 0.87665 0.92232 0.84179 0.84869 0.86284 0.77583 1.18088 1.18514 0.84704 0.90871 0.90301 0.90205 0.90395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.18 10.29 37.16 0.38 0.56 16 2 C 0.06 0.05 6.19 37.16 0.23 0.28 16 3 O -0.36 -0.75 10.12 -39.25 -0.40 -1.15 16 4 C 0.47 1.15 7.26 36.01 0.26 1.41 16 5 O -0.51 -2.70 15.73 -18.75 -0.30 -3.00 16 6 C -0.08 0.03 2.63 -91.77 -0.24 -0.21 16 7 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 8 C -0.11 0.04 5.13 -26.73 -0.14 -0.09 16 9 C -0.13 0.04 5.49 -26.73 -0.15 -0.11 16 10 C 0.14 -0.01 2.45 -67.93 -0.17 -0.18 16 11 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 12 N -0.73 0.01 5.03 -54.85 -0.28 -0.26 16 13 C 0.56 1.79 7.73 -12.47 -0.10 1.70 16 14 O -0.51 -3.59 14.82 -16.59 -0.25 -3.84 16 15 C -0.17 -0.32 5.89 -104.84 -0.62 -0.94 16 16 C 0.19 0.40 6.70 -38.69 -0.26 0.14 16 17 O -0.28 -0.92 8.57 -40.53 -0.35 -1.26 16 18 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 19 C -0.21 0.11 9.03 -39.48 -0.36 -0.25 16 20 C -0.05 0.07 8.65 -39.53 -0.34 -0.27 16 21 C -0.17 0.19 5.35 -104.67 -0.56 -0.37 16 22 C -0.07 0.12 2.79 36.01 0.10 0.22 16 23 O -0.53 0.20 12.83 -35.23 -0.45 -0.26 16 24 Si 0.68 -1.46 29.87 -169.99 -5.08 -6.54 16 25 C -0.02 0.01 9.16 -39.20 -0.36 -0.35 16 26 C -0.13 0.24 5.39 -26.70 -0.14 0.10 16 27 C -0.10 0.05 4.50 -26.71 -0.12 -0.07 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 31 H 0.07 0.06 8.13 -51.93 -0.42 -0.37 16 32 H 0.07 0.07 8.13 -51.93 -0.42 -0.36 16 33 H 0.08 -0.05 8.11 -51.93 -0.42 -0.47 16 34 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 35 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.40 -0.99 6.63 -40.82 -0.27 -1.26 16 38 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 39 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 40 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 41 H 0.14 -0.37 6.30 -52.49 -0.33 -0.70 16 42 H 0.13 -0.44 4.81 -52.49 -0.25 -0.69 16 43 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 44 H 0.38 -1.09 8.70 45.56 0.40 -0.69 16 45 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 46 H -0.26 0.08 7.00 56.52 0.40 0.47 16 47 H 0.14 -0.34 6.40 -52.49 -0.34 -0.67 16 48 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 49 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 50 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 51 H 0.08 0.06 8.10 -51.93 -0.42 -0.37 16 LS Contribution 411.23 15.07 6.20 6.20 Total: 0.00 -9.98 411.23 -10.41 -20.38 By element: Atomic # 1 Polarization: -4.89 SS G_CDS: -7.93 Total: -12.82 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: -1.58 Total: 2.54 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -0.28 Total: -0.26 kcal Atomic # 8 Polarization: -7.77 SS G_CDS: -1.74 Total: -9.51 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.08 Total: -6.54 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -9.98 -10.41 -20.38 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12496546.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.806 kcal (2) G-P(sol) polarization free energy of solvation -9.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.408 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.384 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds