Wall clock time and date at job start Sun Mar 7 2021 02:28:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45202 * 109.46919 * 2 1 4 4 C 1.34230 * 116.99836 * 180.02562 * 3 2 1 5 5 O 1.20833 * 119.99930 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00262 * 180.27336 * 4 3 2 7 7 H 1.09000 * 109.47461 * 59.71633 * 6 4 3 8 8 C 1.52996 * 109.47491 * 179.72204 * 6 4 3 9 9 C 1.53003 * 109.47301 * 179.97438 * 8 6 4 10 10 C 1.52996 * 109.46915 * 299.99916 * 9 8 6 11 11 H 1.08994 * 109.47269 * 299.99538 * 10 9 8 12 12 N 1.46507 * 109.46742 * 179.97438 * 10 9 8 13 13 C 1.34781 * 119.99696 * 155.00353 * 12 10 9 14 14 O 1.21565 * 119.99637 * 359.97438 * 13 12 10 15 15 C 1.47720 * 119.99757 * 180.02562 * 13 12 10 16 16 C 1.39634 * 120.11786 * 179.97438 * 15 13 12 17 17 C 1.37855 * 119.88065 * 179.97438 * 16 15 13 18 18 C 1.50698 * 119.93995 * 179.97438 * 17 16 15 19 19 O 1.42906 * 109.47140 * 255.00056 * 18 17 16 20 20 Si 1.86295 * 109.47221 * 135.00162 * 18 17 16 21 21 C 1.38631 * 120.12056 * 0.02562 * 17 16 15 22 22 F 1.35102 * 119.88324 * 180.02562 * 21 17 16 23 23 C 1.38684 * 120.23869 * 0.02562 * 21 17 16 24 24 C 1.37819 * 120.11614 * 359.70144 * 23 21 17 25 25 C 1.53003 * 109.47207 * 60.00200 * 10 9 8 26 26 C 1.53002 * 109.46796 * 299.72392 * 6 4 3 27 27 H 1.08999 * 109.47371 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.47687 * 300.00275 * 1 2 3 29 29 H 1.09002 * 109.47633 * 60.00402 * 1 2 3 30 30 H 1.08998 * 109.47242 * 239.99429 * 2 1 3 31 31 H 1.09004 * 109.46797 * 119.99245 * 2 1 3 32 32 H 1.09004 * 109.47066 * 299.99799 * 8 6 4 33 33 H 1.08994 * 109.47405 * 59.99969 * 8 6 4 34 34 H 1.09008 * 109.46785 * 59.99617 * 9 8 6 35 35 H 1.09001 * 109.47245 * 179.97438 * 9 8 6 36 36 H 0.96995 * 119.99837 * 334.99817 * 12 10 9 37 37 H 1.08002 * 120.05585 * 359.95046 * 16 15 13 38 38 H 1.09004 * 109.47339 * 14.99992 * 18 17 16 39 39 H 0.96705 * 113.99700 * 179.97438 * 19 18 17 40 40 H 1.48506 * 110.00221 * 59.99981 * 20 18 17 41 41 H 1.48501 * 110.00437 * 181.32135 * 20 18 17 42 42 H 1.07994 * 119.94184 * 179.97438 * 23 21 17 43 43 H 1.07995 * 120.06426 * 180.27494 * 24 23 21 44 44 H 1.08994 * 109.47116 * 59.99825 * 25 10 9 45 45 H 1.09004 * 109.47205 * 179.97438 * 25 10 9 46 46 H 1.09008 * 109.46845 * 299.99275 * 26 6 4 47 47 H 1.08993 * 109.47452 * 60.00035 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 0.0057 7 1 3.5816 3.4669 0.8960 8 6 5.4485 2.8573 0.0107 9 6 6.0334 4.2712 0.0163 10 6 5.5661 5.0213 -1.2326 11 1 5.9051 4.4915 -2.1227 12 7 6.1256 6.3753 -1.2269 13 6 6.2931 7.0401 -2.3873 14 8 5.9803 6.5160 -3.4386 15 6 6.8578 8.4051 -2.3815 16 6 7.0329 9.0960 -3.5823 17 6 7.5598 10.3698 -3.5712 18 6 7.7499 11.1164 -4.8664 19 8 9.1371 11.1298 -5.2093 20 14 7.1419 12.8663 -4.6695 21 6 7.9161 10.9648 -2.3709 22 9 8.4316 12.2136 -2.3655 23 6 7.7453 10.2828 -1.1755 24 6 7.2142 9.0111 -1.1747 25 6 4.0382 5.1014 -1.2376 26 6 3.4534 3.6881 -1.2429 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5138 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 1.8933 -0.5139 -0.8899 31 1 1.8932 -0.5137 0.8901 32 1 5.7814 2.3225 0.9002 33 1 5.7876 2.3279 -0.8797 34 1 5.6943 4.8010 0.9065 35 1 7.1219 4.2141 0.0203 36 1 6.3754 6.7932 -0.3880 37 1 6.7564 8.6330 -4.5180 38 1 7.1850 10.6223 -5.6569 39 1 9.3339 11.5945 -6.0342 40 1 7.9042 13.5510 -3.5945 41 1 7.2944 13.6041 -5.9492 42 1 8.0249 10.7508 -0.2432 43 1 7.0774 8.4825 -0.2429 44 1 3.6992 5.6313 -0.3475 45 1 3.7053 5.6362 -2.1272 46 1 3.7925 3.1586 -2.1334 47 1 2.3649 3.7452 -1.2465 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_12496548.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:28:36 Heat of formation + Delta-G solvation = -170.386991 kcal Electronic energy + Delta-G solvation = -30693.191714 eV Core-core repulsion = 26143.028630 eV Total energy + Delta-G solvation = -4550.163084 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.156 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.38414 -41.88597 -41.38511 -39.94098 -38.88717 -37.79497 -37.64547 -35.46039 -33.19746 -32.70478 -32.11900 -31.80624 -30.55100 -26.99509 -25.95053 -24.60096 -23.80969 -23.52258 -23.28052 -21.93884 -21.43327 -20.76295 -19.02683 -18.82805 -18.70676 -18.58625 -18.06704 -17.64891 -17.55852 -17.09584 -16.85554 -16.32020 -16.12324 -15.65783 -15.37936 -15.27298 -15.14558 -14.96497 -14.89394 -14.69133 -14.50138 -14.14288 -13.99314 -13.88796 -13.81160 -13.52640 -13.38776 -13.22923 -12.93635 -12.87379 -12.74432 -12.51109 -12.38540 -12.28441 -12.15597 -11.60431 -11.51889 -11.45961 -11.40480 -11.33585 -11.04584 -10.77958 -10.19134 -10.08380 -9.77708 -4.97753 -0.47892 0.03004 1.11086 1.20884 1.54699 1.60976 1.64256 1.95494 2.04387 2.56519 3.04567 3.20125 3.46512 3.54240 3.60941 3.62542 3.66002 3.71192 3.93403 3.97768 4.01133 4.04169 4.10929 4.13102 4.19813 4.27891 4.31738 4.33571 4.36794 4.46587 4.63675 4.65903 4.77964 4.78612 4.84613 4.89446 4.93707 4.95656 5.01886 5.07592 5.09332 5.11566 5.13994 5.17310 5.28724 5.31164 5.44369 5.49964 5.62312 6.46870 6.49807 6.67021 7.16633 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.542 6.542 6 C -0.074 4.074 7 H 0.139 0.861 8 C -0.100 4.100 9 C -0.114 4.114 10 C 0.142 3.858 11 H 0.065 0.935 12 N -0.705 5.705 13 C 0.562 3.438 14 O -0.575 6.575 15 C -0.154 4.154 16 C -0.021 4.021 17 C -0.127 4.127 18 C -0.085 4.085 19 O -0.556 6.556 20 Si 0.746 3.254 21 C 0.112 3.888 22 F -0.133 7.133 23 C -0.153 4.153 24 C -0.035 4.035 25 C -0.120 4.120 26 C -0.103 4.103 27 H 0.094 0.906 28 H 0.070 0.930 29 H 0.068 0.932 30 H 0.064 0.936 31 H 0.068 0.932 32 H 0.079 0.921 33 H 0.056 0.944 34 H 0.103 0.897 35 H 0.083 0.917 36 H 0.418 0.582 37 H 0.142 0.858 38 H 0.099 0.901 39 H 0.396 0.604 40 H -0.270 1.270 41 H -0.291 1.291 42 H 0.171 0.829 43 H 0.179 0.821 44 H 0.094 0.906 45 H 0.058 0.942 46 H 0.055 0.945 47 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.570 1.799 5.670 7.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.276 6.276 4 C 0.307 3.693 5 O -0.432 6.432 6 C -0.093 4.093 7 H 0.157 0.843 8 C -0.138 4.138 9 C -0.152 4.152 10 C 0.037 3.963 11 H 0.083 0.917 12 N -0.357 5.357 13 C 0.351 3.649 14 O -0.456 6.456 15 C -0.158 4.158 16 C -0.040 4.040 17 C -0.128 4.128 18 C -0.193 4.193 19 O -0.366 6.366 20 Si 0.650 3.350 21 C 0.092 3.908 22 F -0.111 7.111 23 C -0.171 4.171 24 C -0.054 4.054 25 C -0.158 4.158 26 C -0.141 4.141 27 H 0.113 0.887 28 H 0.089 0.911 29 H 0.087 0.913 30 H 0.082 0.918 31 H 0.086 0.914 32 H 0.097 0.903 33 H 0.075 0.925 34 H 0.121 0.879 35 H 0.102 0.898 36 H 0.256 0.744 37 H 0.160 0.840 38 H 0.117 0.883 39 H 0.247 0.753 40 H -0.196 1.196 41 H -0.219 1.219 42 H 0.188 0.812 43 H 0.197 0.803 44 H 0.113 0.887 45 H 0.077 0.923 46 H 0.074 0.926 47 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -4.344 1.648 5.465 7.173 hybrid contribution 1.408 -0.123 -1.004 1.734 sum -2.936 1.524 4.461 5.554 Atomic orbital electron populations 1.21819 0.90670 1.04215 1.03785 1.23229 0.96939 0.79509 1.02329 1.86516 1.24368 1.33281 1.83471 1.24406 0.80512 0.93451 0.70935 1.90673 1.61153 1.44572 1.46824 1.21272 0.96560 0.88107 1.03332 0.84290 1.21363 0.91557 0.97427 1.03438 1.21756 1.01813 0.94217 0.97420 1.21057 0.93505 0.81948 0.99744 0.91695 1.45800 1.64172 1.16737 1.08943 1.18284 0.77351 0.85386 0.83923 1.90800 1.52457 1.69619 1.32703 1.19975 1.06006 0.94889 0.94900 1.21016 0.93091 0.90909 0.98955 1.19282 1.04297 0.96039 0.93150 1.24864 0.86355 1.11667 0.96451 1.86556 1.23391 1.79200 1.47472 0.94652 0.88851 0.73062 0.78427 1.18257 0.96673 0.80513 0.95324 1.91536 1.84463 1.38237 1.96898 1.21424 1.02317 0.95889 0.97459 1.21535 0.92492 0.93364 0.97990 1.21841 0.94233 0.96135 1.03616 1.21425 1.02020 0.95331 0.95358 0.88689 0.91056 0.91316 0.91776 0.91369 0.90265 0.92528 0.87901 0.89801 0.74362 0.84040 0.88335 0.75279 1.19625 1.21861 0.81179 0.80345 0.88721 0.92325 0.92649 0.89456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.54 10.29 71.98 0.74 1.28 16 2 C 0.05 0.06 6.19 71.98 0.45 0.51 16 3 O -0.36 -1.10 10.13 -51.41 -0.52 -1.62 16 4 C 0.46 1.81 7.25 71.23 0.52 2.33 16 5 O -0.54 -5.81 15.73 21.94 0.35 -5.47 16 6 C -0.07 0.25 2.63 -11.54 -0.03 0.22 16 7 H 0.14 -1.20 8.14 -2.39 -0.02 -1.22 16 8 C -0.10 0.33 4.49 30.59 0.14 0.47 16 9 C -0.11 0.94 5.39 30.59 0.16 1.11 16 10 C 0.14 -0.56 2.46 44.99 0.11 -0.45 16 11 H 0.06 0.16 7.58 -2.39 -0.02 0.14 16 12 N -0.70 3.88 5.03 -445.52 -2.24 1.64 16 13 C 0.56 1.03 7.73 86.75 0.67 1.71 16 14 O -0.58 -6.26 16.01 -3.92 -0.06 -6.33 16 15 C -0.15 0.10 5.87 -20.09 -0.12 -0.01 16 16 C -0.02 -0.05 9.21 22.52 0.21 0.16 16 17 C -0.13 -0.34 4.80 -19.86 -0.10 -0.43 16 18 C -0.09 -0.12 2.79 71.24 0.20 0.08 16 19 O -0.56 -2.46 12.86 -148.98 -1.92 -4.37 16 20 Si 0.75 0.45 30.77 68.60 2.11 2.56 16 21 C 0.11 0.26 6.67 22.47 0.15 0.41 16 22 F -0.13 -0.88 12.83 44.97 0.58 -0.30 16 23 C -0.15 0.62 10.01 22.28 0.22 0.84 16 24 C -0.04 0.24 9.54 22.52 0.21 0.46 16 25 C -0.12 0.55 5.49 30.58 0.17 0.71 16 26 C -0.10 0.33 5.13 30.58 0.16 0.49 16 27 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 28 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 29 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 30 H 0.06 0.14 8.13 -2.39 -0.02 0.12 16 31 H 0.07 0.09 8.13 -2.38 -0.02 0.07 16 32 H 0.08 -0.21 8.10 -2.38 -0.02 -0.23 16 33 H 0.06 0.06 8.10 -2.39 -0.02 0.04 16 34 H 0.10 -1.37 8.14 -2.38 -0.02 -1.39 16 35 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 36 H 0.42 -5.40 6.63 -92.71 -0.61 -6.01 16 37 H 0.14 0.44 7.59 -2.91 -0.02 0.41 16 38 H 0.10 -0.25 7.77 -2.38 -0.02 -0.26 16 39 H 0.40 -1.41 8.74 -74.05 -0.65 -2.06 16 40 H -0.27 -2.00 5.33 99.48 0.53 -1.47 16 41 H -0.29 -1.37 7.11 99.48 0.71 -0.66 16 42 H 0.17 -1.53 8.06 -2.91 -0.02 -1.55 16 43 H 0.18 -2.78 6.40 -2.91 -0.02 -2.80 16 44 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 45 H 0.06 0.01 8.14 -2.38 -0.02 -0.01 16 46 H 0.05 0.02 8.14 -2.38 -0.02 0.00 16 47 H 0.09 -0.33 8.12 -2.39 -0.02 -0.35 16 Total: 0.00 -25.77 388.38 1.76 -24.01 By element: Atomic # 1 Polarization: -19.60 SS G_CDS: -0.40 Total: -19.99 kcal Atomic # 6 Polarization: 6.01 SS G_CDS: 3.86 Total: 9.87 kcal Atomic # 7 Polarization: 3.88 SS G_CDS: -2.24 Total: 1.64 kcal Atomic # 8 Polarization: -15.64 SS G_CDS: -2.15 Total: -17.79 kcal Atomic # 9 Polarization: -0.88 SS G_CDS: 0.58 Total: -0.30 kcal Atomic # 14 Polarization: 0.45 SS G_CDS: 2.11 Total: 2.56 kcal Total: -25.77 1.76 -24.01 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12496548.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.378 kcal (2) G-P(sol) polarization free energy of solvation -25.768 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.009 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds