Wall clock time and date at job start Sun Mar 7 2021 02:28:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 O 1.45200 * 109.47242 * 2 1 4 4 C 1.34233 * 116.99859 * 179.97438 * 3 2 1 5 5 O 1.20820 * 120.00300 * 0.02562 * 4 3 2 6 6 C 1.50709 * 119.99663 * 180.02562 * 4 3 2 7 7 H 1.08992 * 109.46913 * 59.99794 * 6 4 3 8 8 C 1.52993 * 109.46725 * 180.02562 * 6 4 3 9 9 C 1.53007 * 109.47034 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.47315 * 300.00217 * 9 8 6 11 11 H 1.08993 * 109.46811 * 299.99854 * 10 9 8 12 12 N 1.46498 * 109.47008 * 179.97438 * 10 9 8 13 13 C 1.34776 * 119.99757 * 155.00344 * 12 10 9 14 14 O 1.21571 * 119.99838 * 359.97438 * 13 12 10 15 15 C 1.47664 * 119.99935 * 179.97438 * 13 12 10 16 16 C 1.40008 * 120.45561 * 353.98402 * 15 13 12 17 17 N 1.31312 * 121.38240 * 180.02562 * 16 15 13 18 18 C 1.32819 * 121.88693 * 359.97438 * 17 16 15 19 19 N 1.37155 * 132.96972 * 180.02562 * 18 17 16 20 20 C 1.36943 * 110.11588 * 179.97438 * 19 18 17 21 21 C 1.34174 * 109.95276 * 359.97438 * 20 19 18 22 22 C 1.50704 * 126.60018 * 180.02562 * 21 20 19 23 23 O 1.42901 * 109.46992 * 104.97385 * 22 21 20 24 24 Si 1.86302 * 109.46883 * 344.97339 * 22 21 20 25 25 C 1.41021 * 120.08249 * 359.97438 * 18 17 16 26 26 C 1.39287 * 119.62028 * 359.72861 * 25 18 17 27 27 C 1.50705 * 121.03119 * 180.27595 * 26 25 18 28 28 C 1.53000 * 109.46944 * 59.99552 * 10 9 8 29 29 C 1.52996 * 109.47198 * 299.99913 * 28 10 9 30 30 H 1.09004 * 109.47565 * 180.02562 * 1 2 3 31 31 H 1.09006 * 109.46931 * 299.99961 * 1 2 3 32 32 H 1.08997 * 109.47242 * 59.99453 * 1 2 3 33 33 H 1.09005 * 109.47382 * 240.00664 * 2 1 3 34 34 H 1.09000 * 109.47692 * 120.00342 * 2 1 3 35 35 H 1.09001 * 109.47702 * 299.99499 * 8 6 4 36 36 H 1.09002 * 109.47704 * 60.00198 * 8 6 4 37 37 H 1.09003 * 109.46616 * 60.00285 * 9 8 6 38 38 H 1.08994 * 109.47177 * 180.02562 * 9 8 6 39 39 H 0.96994 * 120.00239 * 334.99444 * 12 10 9 40 40 H 1.08004 * 119.31190 * 0.02562 * 16 15 13 41 41 H 0.97001 * 124.94197 * 0.02562 * 19 18 17 42 42 H 1.08006 * 125.02489 * 179.97438 * 20 19 18 43 43 H 1.08996 * 109.47154 * 224.97261 * 22 21 20 44 44 H 0.96694 * 114.00141 * 299.99325 * 23 22 21 45 45 H 1.48500 * 110.00000 * 179.97438 * 24 22 21 46 46 H 1.48498 * 109.99834 * 301.31971 * 24 22 21 47 47 H 1.08997 * 109.46608 * 263.97038 * 27 26 25 48 48 H 1.09000 * 109.46650 * 23.96681 * 27 26 25 49 49 H 1.08999 * 109.46810 * 143.97081 * 27 26 25 50 50 H 1.09003 * 109.47137 * 60.00445 * 28 10 9 51 51 H 1.08998 * 109.46952 * 179.97438 * 28 10 9 52 52 H 1.08993 * 109.47557 * 300.00311 * 29 28 10 53 53 H 1.09003 * 109.47072 * 180.02562 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9374 0.0012 7 1 3.5844 3.4693 0.8911 8 6 5.4486 2.8573 0.0010 9 6 6.0334 4.2712 0.0010 10 6 5.5618 5.0182 -1.2481 11 1 5.8977 4.4861 -2.1381 12 7 6.1213 6.3721 -1.2478 13 6 6.2848 7.0340 -2.4104 14 8 5.9683 6.5073 -3.4594 15 6 6.8482 8.3989 -2.4100 16 6 7.0989 9.0629 -1.2031 17 7 7.5991 10.2768 -1.1816 18 6 7.8923 10.9347 -2.2975 19 7 8.4115 12.1810 -2.5390 20 6 8.5249 12.3908 -3.8875 21 6 8.0931 11.3110 -4.5567 22 6 8.0524 11.1384 -6.0533 23 8 9.1099 10.2683 -6.4614 24 14 8.2606 12.7971 -6.8756 25 6 7.6691 10.3321 -3.5528 26 6 7.1454 9.0429 -3.6142 27 6 6.8999 8.3663 -4.9382 28 6 4.0339 5.0983 -1.2480 29 6 3.4491 3.6845 -1.2481 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5139 -0.8899 33 1 1.8933 -0.5137 -0.8901 34 1 1.8933 -0.5139 0.8899 35 1 5.7846 2.3248 0.8908 36 1 5.7845 2.3256 -0.8892 37 1 5.6976 4.8032 0.8911 38 1 7.1219 4.2141 0.0005 39 1 6.3741 6.7923 -0.4109 40 1 6.8762 8.5662 -0.2703 41 1 8.6626 12.8205 -1.8542 42 1 8.9056 13.2922 -4.3447 43 1 7.0944 10.7068 -6.3433 44 1 9.9933 10.5900 -6.2353 45 1 8.2228 12.6405 -8.3518 46 1 7.1850 13.7211 -6.4347 47 1 5.8577 8.5012 -5.2274 48 1 7.5473 8.8065 -5.6966 49 1 7.1173 7.3020 -4.8481 50 1 3.6980 5.6304 -0.3580 51 1 3.6979 5.6309 -2.1377 52 1 3.7850 3.1524 -2.1381 53 1 2.3606 3.7415 -1.2485 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_12890568.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:28:57 Heat of formation + Delta-G solvation = -92.002842 kcal Electronic energy + Delta-G solvation = -36004.441916 eV Core-core repulsion = 31228.752459 eV Total energy + Delta-G solvation = -4775.689458 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.188 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.84121 -41.87334 -41.09579 -39.37158 -38.57643 -37.75360 -37.63924 -35.62130 -34.87119 -32.81981 -32.03739 -31.82620 -31.67613 -30.17684 -28.86248 -26.52192 -25.65523 -24.59052 -24.06389 -23.78306 -23.45845 -22.05058 -21.66559 -20.93034 -20.57529 -19.28070 -18.86691 -18.66665 -17.80459 -17.67527 -17.55930 -17.47744 -17.07537 -16.72716 -16.36870 -16.12883 -15.80963 -15.55454 -15.40334 -15.23392 -15.14698 -14.90664 -14.63295 -14.52538 -14.20653 -14.12167 -13.99273 -13.81341 -13.77252 -13.61192 -13.45850 -13.27434 -13.18813 -13.18355 -12.95206 -12.70667 -12.52189 -12.37793 -12.28558 -12.17834 -12.03464 -11.62059 -11.53500 -11.45676 -11.33221 -11.15145 -11.11223 -10.54772 -10.20249 -10.11056 -9.60665 -9.10434 -4.98359 -0.34294 -0.06602 1.09109 1.35880 1.44665 1.62412 1.67071 1.76166 1.81707 2.05746 2.06940 2.76811 3.32002 3.45997 3.48932 3.56741 3.60212 3.63516 3.66493 3.74923 3.78423 3.92325 3.96568 4.02488 4.09097 4.15841 4.18265 4.28829 4.29961 4.31097 4.32123 4.36913 4.44066 4.46874 4.59335 4.62667 4.66661 4.76302 4.76533 4.82525 4.87547 4.94141 5.00475 5.05485 5.08782 5.10486 5.15013 5.18123 5.25499 5.27338 5.30754 5.39924 5.43523 5.52909 5.74872 6.24770 6.50638 6.65190 6.83998 6.89039 7.19617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.463 3.537 5 O -0.541 6.541 6 C -0.074 4.074 7 H 0.138 0.862 8 C -0.099 4.099 9 C -0.114 4.114 10 C 0.144 3.856 11 H 0.066 0.934 12 N -0.708 5.708 13 C 0.570 3.430 14 O -0.566 6.566 15 C -0.241 4.241 16 C 0.180 3.820 17 N -0.515 5.515 18 C 0.287 3.713 19 N -0.560 5.560 20 C 0.097 3.903 21 C -0.208 4.208 22 C -0.050 4.050 23 O -0.558 6.558 24 Si 0.804 3.196 25 C -0.167 4.167 26 C 0.058 3.942 27 C -0.121 4.121 28 C -0.120 4.120 29 C -0.102 4.102 30 H 0.095 0.905 31 H 0.070 0.930 32 H 0.067 0.933 33 H 0.064 0.936 34 H 0.068 0.932 35 H 0.080 0.920 36 H 0.057 0.943 37 H 0.101 0.899 38 H 0.083 0.917 39 H 0.414 0.586 40 H 0.197 0.803 41 H 0.439 0.561 42 H 0.232 0.768 43 H 0.093 0.907 44 H 0.395 0.605 45 H -0.306 1.306 46 H -0.281 1.281 47 H 0.070 0.930 48 H 0.083 0.917 49 H 0.080 0.920 50 H 0.092 0.908 51 H 0.055 0.945 52 H 0.056 0.944 53 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.912 7.133 4.734 8.772 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.308 3.692 5 O -0.431 6.431 6 C -0.093 4.093 7 H 0.156 0.844 8 C -0.137 4.137 9 C -0.152 4.152 10 C 0.040 3.960 11 H 0.084 0.916 12 N -0.360 5.360 13 C 0.359 3.641 14 O -0.447 6.447 15 C -0.248 4.248 16 C 0.012 3.988 17 N -0.228 5.228 18 C 0.053 3.947 19 N -0.167 5.167 20 C -0.030 4.030 21 C -0.215 4.215 22 C -0.158 4.158 23 O -0.366 6.366 24 Si 0.709 3.291 25 C -0.175 4.175 26 C 0.050 3.950 27 C -0.177 4.177 28 C -0.159 4.159 29 C -0.140 4.140 30 H 0.114 0.886 31 H 0.089 0.911 32 H 0.086 0.914 33 H 0.083 0.917 34 H 0.087 0.913 35 H 0.098 0.902 36 H 0.076 0.924 37 H 0.119 0.881 38 H 0.102 0.898 39 H 0.253 0.747 40 H 0.213 0.787 41 H 0.281 0.719 42 H 0.248 0.752 43 H 0.111 0.889 44 H 0.245 0.755 45 H -0.234 1.234 46 H -0.207 1.207 47 H 0.088 0.912 48 H 0.101 0.899 49 H 0.099 0.901 50 H 0.110 0.890 51 H 0.074 0.926 52 H 0.074 0.926 53 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.266 7.276 4.108 8.451 hybrid contribution -0.533 -1.166 -0.128 1.288 sum 0.733 6.110 3.980 7.329 Atomic orbital electron populations 1.21820 0.90684 1.04236 1.03748 1.23235 0.96932 0.79483 1.02368 1.86518 1.24367 1.33334 1.83482 1.24370 0.80515 0.93395 0.70958 1.90667 1.61128 1.44516 1.46783 1.21266 0.96619 0.88176 1.03213 0.84403 1.21358 0.91472 0.97328 1.03512 1.21757 1.01802 0.94296 0.97360 1.21030 0.93283 0.81916 0.99779 0.91567 1.45790 1.64615 1.16846 1.08718 1.17998 0.77350 0.84828 0.83955 1.90748 1.51977 1.69677 1.32264 1.20535 1.12205 0.97060 0.94992 1.22992 0.90442 0.88068 0.97346 1.66522 1.17185 1.09993 1.29134 1.18787 0.97583 0.88402 0.89898 1.41622 1.54053 1.12548 1.08446 1.22397 0.99730 1.00190 0.80687 1.20803 1.10706 0.94587 0.95408 1.24729 0.92871 1.06759 0.91482 1.86473 1.18207 1.49932 1.82004 0.94065 0.86393 0.72562 0.76088 1.19785 1.07485 0.95353 0.94830 1.20060 0.88286 0.91005 0.95671 1.21071 1.02002 1.01565 0.93036 1.21846 0.94483 0.96175 1.03350 1.21421 1.01903 0.95251 0.95456 0.88617 0.91080 0.91373 0.91747 0.91310 0.90163 0.92419 0.88070 0.89789 0.74746 0.78689 0.71941 0.75226 0.88919 0.75539 1.23386 1.20746 0.91161 0.89857 0.90136 0.88985 0.92619 0.92557 0.89570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.39 10.29 71.98 0.74 1.13 16 2 C 0.05 0.11 6.19 71.98 0.45 0.56 16 3 O -0.36 -1.57 10.12 -51.45 -0.52 -2.09 16 4 C 0.46 2.43 7.25 71.24 0.52 2.94 16 5 O -0.54 -6.39 15.73 21.98 0.35 -6.04 16 6 C -0.07 0.12 2.63 -11.54 -0.03 0.09 16 7 H 0.14 -0.93 8.14 -2.39 -0.02 -0.95 16 8 C -0.10 0.17 4.49 30.59 0.14 0.30 16 9 C -0.11 0.68 5.39 30.60 0.16 0.85 16 10 C 0.14 -0.19 2.45 44.99 0.11 -0.08 16 11 H 0.07 0.31 7.58 -2.39 -0.02 0.29 16 12 N -0.71 1.29 5.03 -445.59 -2.24 -0.95 16 13 C 0.57 3.42 7.68 86.73 0.67 4.09 16 14 O -0.57 -7.60 13.17 -3.94 -0.05 -7.66 16 15 C -0.24 -1.33 5.89 -19.99 -0.12 -1.45 16 16 C 0.18 0.24 10.67 85.20 0.91 1.15 16 17 N -0.52 -2.23 10.37 -191.74 -1.99 -4.22 16 18 C 0.29 1.11 8.42 134.02 1.13 2.24 16 19 N -0.56 2.23 6.04 -192.25 -1.16 1.07 16 20 C 0.10 -0.66 10.44 82.97 0.87 0.21 16 21 C -0.21 0.03 5.57 -18.64 -0.10 -0.08 16 22 C -0.05 0.03 1.88 71.24 0.13 0.16 16 23 O -0.56 -0.25 11.64 -148.98 -1.73 -1.99 16 24 Si 0.80 -4.23 30.77 68.60 2.11 -2.12 16 25 C -0.17 -0.98 6.16 -20.19 -0.12 -1.10 16 26 C 0.06 0.49 5.98 -19.24 -0.12 0.38 16 27 C -0.12 -1.17 8.44 71.24 0.60 -0.57 16 28 C -0.12 0.22 5.49 30.59 0.17 0.39 16 29 C -0.10 0.12 5.13 30.59 0.16 0.27 16 30 H 0.10 -0.53 8.14 -2.38 -0.02 -0.54 16 31 H 0.07 -0.21 8.14 -2.38 -0.02 -0.23 16 32 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 33 H 0.06 0.20 8.13 -2.38 -0.02 0.18 16 34 H 0.07 0.16 8.13 -2.39 -0.02 0.14 16 35 H 0.08 -0.10 8.10 -2.39 -0.02 -0.12 16 36 H 0.06 0.14 8.10 -2.39 -0.02 0.13 16 37 H 0.10 -1.09 8.14 -2.39 -0.02 -1.10 16 38 H 0.08 -0.52 8.14 -2.39 -0.02 -0.53 16 39 H 0.41 -3.53 6.68 -92.71 -0.62 -4.15 16 40 H 0.20 -1.44 6.43 -2.91 -0.02 -1.46 16 41 H 0.44 -4.25 8.96 -92.71 -0.83 -5.08 16 42 H 0.23 -3.88 6.36 -2.91 -0.02 -3.90 16 43 H 0.09 0.30 7.15 -2.39 -0.02 0.28 16 44 H 0.39 -3.31 8.70 -74.06 -0.64 -3.96 16 45 H -0.31 -1.11 7.11 99.48 0.71 -0.40 16 46 H -0.28 0.26 7.11 99.48 0.71 0.96 16 47 H 0.07 0.73 8.14 -2.39 -0.02 0.71 16 48 H 0.08 0.75 4.80 -2.39 -0.01 0.74 16 49 H 0.08 1.05 5.97 -2.39 -0.01 1.04 16 50 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 51 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 52 H 0.06 0.12 8.14 -2.39 -0.02 0.11 16 53 H 0.09 -0.15 8.11 -2.39 -0.02 -0.17 16 Total: 0.00 -31.08 422.15 -0.06 -31.13 By element: Atomic # 1 Polarization: -17.55 SS G_CDS: -1.07 Total: -18.62 kcal Atomic # 6 Polarization: 5.23 SS G_CDS: 6.25 Total: 11.48 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -5.39 Total: -4.09 kcal Atomic # 8 Polarization: -15.82 SS G_CDS: -1.96 Total: -17.78 kcal Atomic # 14 Polarization: -4.23 SS G_CDS: 2.11 Total: -2.12 kcal Total: -31.08 -0.06 -31.13 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_12890568.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.869 kcal (2) G-P(sol) polarization free energy of solvation -31.078 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.948 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.134 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.003 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds