Wall clock time and date at job start Sun Mar 7 2021 02:29:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45205 * 109.47038 * 2 1 4 4 C 1.34225 * 116.99943 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00047 * 0.02562 * 4 3 2 6 6 C 1.50698 * 119.99990 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.47304 * 299.99904 * 6 4 3 8 8 C 1.52999 * 109.46824 * 60.00712 * 6 4 3 9 9 C 1.52997 * 109.46991 * 179.97438 * 8 6 4 10 10 C 1.52996 * 109.47131 * 299.99311 * 9 8 6 11 11 H 1.08996 * 109.47452 * 300.00000 * 10 9 8 12 12 N 1.46507 * 109.47258 * 179.97438 * 10 9 8 13 13 C 1.34778 * 119.99609 * 85.00044 * 12 10 9 14 14 O 1.21640 * 120.00134 * 0.02562 * 13 12 10 15 15 C 1.47057 * 119.99734 * 179.97438 * 13 12 10 16 16 C 1.35865 * 125.42775 * 179.69257 * 15 13 12 17 17 C 1.41588 * 107.72924 * 179.84901 * 16 15 13 18 18 C 1.40071 * 133.38155 * 180.11620 * 17 16 15 19 19 C 1.36467 * 119.83044 * 180.32821 * 18 17 16 20 20 C 1.38903 * 120.61631 * 0.02562 * 19 18 17 21 21 C 1.50698 * 119.67734 * 180.02562 * 20 19 18 22 22 O 1.42902 * 109.47438 * 119.99766 * 21 20 19 23 23 Si 1.86306 * 109.47058 * 359.97438 * 21 20 19 24 24 C 1.37710 * 120.64854 * 359.97438 * 20 19 18 25 25 C 1.39184 * 119.80708 * 0.02562 * 24 20 19 26 26 N 1.37490 * 133.18639 * 180.02562 * 25 24 20 27 27 C 1.53002 * 109.46972 * 60.00459 * 10 9 8 28 28 C 1.52997 * 109.46817 * 299.99733 * 27 10 9 29 29 H 1.08996 * 109.47599 * 59.99878 * 1 2 3 30 30 H 1.08999 * 109.47398 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47413 * 299.99806 * 1 2 3 32 32 H 1.09004 * 109.46731 * 240.00228 * 2 1 3 33 33 H 1.08993 * 109.47109 * 120.00089 * 2 1 3 34 34 H 1.09002 * 109.46719 * 299.99679 * 8 6 4 35 35 H 1.08993 * 109.47839 * 59.99520 * 8 6 4 36 36 H 1.09001 * 109.47289 * 179.97438 * 9 8 6 37 37 H 1.09000 * 109.47611 * 59.99933 * 9 8 6 38 38 H 0.97001 * 120.00071 * 265.00501 * 12 10 9 39 39 H 1.08007 * 126.13175 * 0.02562 * 16 15 13 40 40 H 1.08002 * 120.08402 * 0.30827 * 18 17 16 41 41 H 1.08001 * 119.69228 * 179.97438 * 19 18 17 42 42 H 1.09002 * 109.47430 * 240.00091 * 21 20 19 43 43 H 0.96695 * 114.00838 * 180.02562 * 22 21 20 44 44 H 1.48501 * 109.99925 * 298.67995 * 23 21 20 45 45 H 1.48502 * 110.00039 * 60.00236 * 23 21 20 46 46 H 1.07999 * 120.09526 * 180.02562 * 24 20 19 47 47 H 0.96996 * 125.60348 * 0.02562 * 26 25 24 48 48 H 1.09002 * 109.47070 * 179.97438 * 27 10 9 49 49 H 1.08996 * 109.47407 * 59.99513 * 27 10 9 50 50 H 1.09001 * 109.47502 * 300.00518 * 28 27 10 51 51 H 1.09001 * 109.47289 * 180.02562 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9374 0.0000 7 1 3.5852 3.4691 -0.8904 8 6 3.4486 3.6850 1.2487 9 6 4.0339 5.0986 1.2485 10 6 5.5617 5.0180 1.2496 11 1 5.8969 4.4862 2.1400 12 7 6.1222 6.3716 1.2488 13 6 6.2852 7.0341 2.4111 14 8 5.9674 6.5080 3.4608 15 6 6.8483 8.3926 2.4104 16 6 7.0542 9.1604 3.5122 17 6 7.6112 10.3895 3.0833 18 6 8.0255 11.5452 3.7575 19 6 8.5298 12.5988 3.0517 20 6 8.6365 12.5372 1.6682 21 6 9.1971 13.7128 0.9100 22 8 10.3644 13.3049 0.1938 23 14 9.6445 15.0679 2.1077 24 6 8.2359 11.4121 0.9826 25 6 7.7183 10.3245 1.6801 26 7 7.2463 9.0939 1.2887 27 6 6.0339 4.2705 0.0009 28 6 5.4486 2.8568 0.0011 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5138 0.8900 32 1 1.8933 -0.5138 -0.8901 33 1 1.8933 -0.5138 0.8899 34 1 2.3601 3.7420 1.2481 35 1 3.7841 3.1534 2.1391 36 1 3.6972 5.6314 2.1378 37 1 3.6987 5.6306 0.3581 38 1 6.3759 6.7910 0.4117 39 1 6.8353 8.8818 4.5325 40 1 7.9458 11.6026 4.8330 41 1 8.8483 13.4890 3.5737 42 1 8.4500 14.0816 0.2072 43 1 10.7794 14.0127 -0.3179 44 1 8.4328 15.5229 2.8356 45 1 10.6623 14.5781 3.0717 46 1 8.3232 11.3737 -0.0932 47 1 7.2009 8.7710 0.3752 48 1 7.1224 4.2134 0.0014 49 1 5.6987 4.8023 -0.8895 50 1 5.7837 2.3249 0.8915 51 1 5.7853 2.3240 -0.8882 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13158378.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:29:09 Heat of formation + Delta-G solvation = -103.108264 kcal Electronic energy + Delta-G solvation = -32848.285854 eV Core-core repulsion = 28293.078359 eV Total energy + Delta-G solvation = -4555.207495 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.71520 -41.79064 -40.82230 -39.26250 -38.71407 -37.55218 -37.01904 -35.48844 -33.34914 -32.82458 -31.99177 -31.70694 -30.61627 -30.43517 -27.07304 -25.57670 -24.37844 -23.98190 -23.65131 -22.95320 -22.02408 -21.84543 -21.36795 -20.81952 -19.56401 -18.65964 -18.44599 -17.98810 -17.76852 -17.58145 -17.34734 -17.01548 -16.50216 -16.36851 -15.89986 -15.49387 -15.43950 -15.12254 -15.07434 -14.93494 -14.77485 -14.71926 -14.51269 -14.33123 -14.21622 -14.01718 -13.88171 -13.62216 -13.41257 -13.35230 -12.94717 -12.85560 -12.69364 -12.56817 -12.49293 -12.36452 -12.26623 -12.15194 -11.84665 -11.75757 -11.54481 -11.50681 -11.37354 -11.13723 -10.94485 -10.35592 -10.27764 -9.33630 -8.83192 -4.96443 -0.35060 0.48570 0.98883 1.20351 1.26784 1.61653 1.65184 1.74496 1.89448 1.99468 2.24941 2.72536 3.34751 3.37071 3.38597 3.48949 3.57191 3.62998 3.77546 3.83473 3.91205 3.94409 3.94882 3.98100 4.05650 4.11611 4.17648 4.18130 4.25614 4.28057 4.28772 4.35395 4.42928 4.46417 4.55608 4.57652 4.70831 4.78750 4.79806 4.84902 4.87242 4.94060 4.94776 4.97245 5.01633 5.07800 5.12432 5.23243 5.33664 5.36524 5.48143 5.50858 5.58886 5.93337 6.17054 6.32933 6.57879 6.75689 6.97554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.108 4.108 9 C -0.128 4.128 10 C 0.142 3.858 11 H 0.096 0.904 12 N -0.726 5.726 13 C 0.587 3.413 14 O -0.515 6.515 15 C 0.013 3.987 16 C -0.099 4.099 17 C -0.118 4.118 18 C -0.049 4.049 19 C -0.152 4.152 20 C -0.045 4.045 21 C -0.071 4.071 22 O -0.546 6.546 23 Si 0.684 3.316 24 C -0.100 4.100 25 C 0.117 3.883 26 N -0.577 5.577 27 C -0.126 4.126 28 C -0.101 4.101 29 H 0.067 0.933 30 H 0.081 0.919 31 H 0.067 0.933 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.083 0.917 35 H 0.073 0.927 36 H 0.078 0.922 37 H 0.070 0.930 38 H 0.396 0.604 39 H 0.159 0.841 40 H 0.132 0.868 41 H 0.121 0.879 42 H 0.075 0.925 43 H 0.383 0.617 44 H -0.254 1.254 45 H -0.250 1.250 46 H 0.129 0.871 47 H 0.418 0.582 48 H 0.079 0.921 49 H 0.073 0.927 50 H 0.078 0.922 51 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.159 4.353 -5.602 7.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.146 4.146 9 C -0.167 4.167 10 C 0.039 3.961 11 H 0.114 0.886 12 N -0.376 5.376 13 C 0.373 3.627 14 O -0.390 6.390 15 C -0.096 4.096 16 C -0.126 4.126 17 C -0.122 4.122 18 C -0.067 4.067 19 C -0.170 4.170 20 C -0.046 4.046 21 C -0.182 4.182 22 O -0.352 6.352 23 Si 0.585 3.415 24 C -0.120 4.120 25 C 0.007 3.993 26 N -0.182 5.182 27 C -0.164 4.164 28 C -0.139 4.139 29 H 0.086 0.914 30 H 0.100 0.900 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.102 0.898 35 H 0.092 0.908 36 H 0.096 0.904 37 H 0.089 0.911 38 H 0.230 0.770 39 H 0.176 0.824 40 H 0.150 0.850 41 H 0.138 0.862 42 H 0.093 0.907 43 H 0.230 0.770 44 H -0.179 1.179 45 H -0.174 1.174 46 H 0.147 0.853 47 H 0.256 0.744 48 H 0.097 0.903 49 H 0.091 0.909 50 H 0.097 0.903 51 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -1.372 3.179 -3.821 5.156 hybrid contribution -0.222 -0.638 -1.125 1.313 sum -1.594 2.541 -4.947 5.785 Atomic orbital electron populations 1.21819 0.92326 1.03270 1.03649 1.23081 0.95601 0.79859 1.02742 1.86503 1.24403 1.32741 1.83764 1.23712 0.80707 0.92578 0.72227 1.90691 1.60463 1.43146 1.44983 1.21174 0.96652 0.89902 1.02262 0.87089 1.21493 1.01834 0.95150 0.96142 1.21928 0.94517 0.96747 1.03461 1.21134 0.93285 0.81608 1.00122 0.88595 1.45954 1.65583 1.17537 1.08553 1.17171 0.77913 0.83429 0.84175 1.90884 1.49926 1.67161 1.30988 1.20098 1.08451 0.93984 0.87053 1.20969 1.01209 0.91873 0.98506 1.18199 1.05839 0.95878 0.92302 1.20322 0.95754 0.90788 0.99876 1.20341 1.04272 0.99161 0.93252 1.19024 0.98428 0.94408 0.92785 1.24696 0.90108 1.01410 1.01962 1.86492 1.41523 1.40451 1.66768 0.95432 0.82466 0.83132 0.80434 1.19822 1.01620 0.90878 0.99695 1.18278 1.00174 0.86890 0.93952 1.41868 1.55121 1.12927 1.08310 1.21823 1.01617 0.95661 0.97266 1.21389 0.91574 0.96306 1.04608 0.91392 0.90009 0.91343 0.91130 0.91091 0.89801 0.90797 0.90372 0.91148 0.77039 0.82352 0.85024 0.86215 0.90674 0.76978 1.17886 1.17416 0.85333 0.74446 0.90262 0.90860 0.90298 0.90073 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.29 37.16 0.38 0.62 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.56 10.12 -39.24 -0.40 -0.96 16 4 C 0.47 0.86 7.25 36.00 0.26 1.12 16 5 O -0.51 -2.43 15.73 -18.75 -0.29 -2.72 16 6 C -0.08 0.10 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 8 C -0.11 0.15 5.13 -26.73 -0.14 0.01 16 9 C -0.13 0.19 5.49 -26.73 -0.15 0.04 16 10 C 0.14 -0.19 2.45 -67.93 -0.17 -0.36 16 11 H 0.10 0.07 7.58 -51.93 -0.39 -0.33 16 12 N -0.73 1.10 5.07 -55.00 -0.28 0.82 16 13 C 0.59 1.09 7.76 -12.68 -0.10 0.99 16 14 O -0.51 -2.81 16.50 5.24 0.09 -2.72 16 15 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 16 C -0.10 -0.26 10.53 -39.16 -0.41 -0.67 16 17 C -0.12 -0.34 6.16 -106.93 -0.66 -1.00 16 18 C -0.05 -0.11 10.06 -39.53 -0.40 -0.51 16 19 C -0.15 -0.38 8.59 -39.97 -0.34 -0.72 16 20 C -0.04 -0.09 5.43 -104.57 -0.57 -0.66 16 21 C -0.07 0.03 2.80 36.00 0.10 0.13 16 22 O -0.55 0.16 12.73 -35.23 -0.45 -0.29 16 23 Si 0.68 -0.85 29.75 -169.99 -5.06 -5.91 16 24 C -0.10 -0.17 9.61 -39.42 -0.38 -0.54 16 25 C 0.12 0.23 7.25 -83.97 -0.61 -0.38 16 26 N -0.58 0.17 6.07 -7.36 -0.04 0.12 16 27 C -0.13 0.38 5.39 -26.73 -0.14 0.23 16 28 C -0.10 0.14 4.49 -26.73 -0.12 0.02 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 33 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 34 H 0.08 -0.12 8.11 -51.93 -0.42 -0.54 16 35 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 36 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.40 -1.70 7.66 -40.82 -0.31 -2.01 16 39 H 0.16 0.31 8.06 -52.48 -0.42 -0.12 16 40 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 41 H 0.12 0.21 4.82 -52.49 -0.25 -0.04 16 42 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 43 H 0.38 -2.03 8.74 45.56 0.40 -1.63 16 44 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 45 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 46 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 47 H 0.42 -1.52 8.12 -40.82 -0.33 -1.86 16 48 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 49 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 50 H 0.08 -0.01 8.10 -51.93 -0.42 -0.43 16 51 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 LS Contribution 417.60 15.07 6.29 6.29 Total: 0.00 -10.56 417.60 -11.85 -22.41 By element: Atomic # 1 Polarization: -7.23 SS G_CDS: -7.68 Total: -14.91 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -4.02 Total: -2.13 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.32 Total: 0.94 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -1.05 Total: -6.69 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.06 Total: -5.91 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -10.56 -11.85 -22.41 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13158378.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.700 kcal (2) G-P(sol) polarization free energy of solvation -10.561 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.848 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.408 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.108 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds