Wall clock time and date at job start Sun Mar 7 2021 02:29:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45201 * 109.46517 * 2 1 4 4 C 1.34234 * 116.99715 * 180.02562 * 3 2 1 5 5 O 1.20827 * 120.00190 * 359.97438 * 4 3 2 6 6 C 1.50699 * 120.00012 * 180.02562 * 4 3 2 7 7 H 1.09000 * 109.47437 * 300.00285 * 6 4 3 8 8 C 1.53001 * 109.47160 * 59.99864 * 6 4 3 9 9 C 1.52997 * 109.47442 * 180.02562 * 8 6 4 10 10 C 1.53005 * 109.46931 * 300.00318 * 9 8 6 11 11 H 1.09001 * 109.47204 * 299.99614 * 10 9 8 12 12 N 1.46499 * 109.46985 * 179.97438 * 10 9 8 13 13 C 1.34780 * 119.99854 * 85.00065 * 12 10 9 14 14 O 1.21513 * 120.00064 * 359.97438 * 13 12 10 15 15 C 1.48171 * 119.99878 * 179.97438 * 13 12 10 16 16 N 1.32717 * 119.72535 * 359.97299 * 15 13 12 17 17 C 1.31519 * 121.64555 * 179.97438 * 16 15 13 18 18 C 1.38558 * 120.90062 * 0.05129 * 17 16 15 19 19 C 1.50699 * 120.32113 * 180.24772 * 18 17 16 20 20 O 1.42898 * 109.47005 * 119.72272 * 19 18 17 21 21 Si 1.86305 * 109.47198 * 359.72462 * 19 18 17 22 22 C 1.38625 * 119.35464 * 359.97438 * 18 17 16 23 23 C 1.38592 * 118.48828 * 359.97438 * 22 18 17 24 24 C 1.53001 * 109.47317 * 59.99606 * 10 9 8 25 25 C 1.52993 * 109.47112 * 179.97438 * 6 4 3 26 26 H 1.08997 * 109.46960 * 299.99367 * 1 2 3 27 27 H 1.08997 * 109.47651 * 60.00112 * 1 2 3 28 28 H 1.08999 * 109.46340 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.46960 * 240.00633 * 2 1 3 30 30 H 1.08997 * 109.47651 * 119.99888 * 2 1 3 31 31 H 1.09000 * 109.47127 * 300.00251 * 8 6 4 32 32 H 1.09001 * 109.46977 * 60.00300 * 8 6 4 33 33 H 1.08998 * 109.47221 * 180.02562 * 9 8 6 34 34 H 1.08996 * 109.46967 * 59.99685 * 9 8 6 35 35 H 0.97001 * 120.00251 * 264.99576 * 12 10 9 36 36 H 1.07997 * 119.54582 * 180.02562 * 17 16 15 37 37 H 1.09001 * 109.47771 * 239.72511 * 19 18 17 38 38 H 0.96695 * 114.00173 * 299.99712 * 20 19 18 39 39 H 1.48493 * 110.00220 * 58.67969 * 21 19 18 40 40 H 1.48501 * 109.99832 * 180.02562 * 21 19 18 41 41 H 1.07998 * 120.75259 * 180.02562 * 22 18 17 42 42 H 1.07997 * 120.46600 * 180.02562 * 23 22 18 43 43 H 1.09000 * 109.46602 * 60.00259 * 24 10 9 44 44 H 1.09000 * 109.47127 * 179.97438 * 24 10 9 45 45 H 1.09002 * 109.47521 * 60.00083 * 25 6 4 46 46 H 1.09001 * 109.47479 * 299.99979 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5450 -0.0005 5 8 4.0808 0.5868 -0.0005 6 6 3.9206 2.9376 0.0000 7 1 3.5842 3.4703 -0.8895 8 6 3.4496 3.6838 1.2499 9 6 4.0337 5.0978 1.2502 10 6 5.5617 5.0184 1.2491 11 1 5.8985 4.4860 2.1386 12 7 6.1211 6.3724 1.2487 13 6 6.2852 7.0340 2.4115 14 8 5.9688 6.5076 3.4600 15 6 6.8515 8.4032 2.4112 16 7 7.1957 8.9727 1.2629 17 6 7.7011 10.1861 1.2187 18 6 7.8949 10.9189 2.3786 19 6 8.4699 12.3103 2.3123 20 8 7.5317 13.2399 2.8579 21 14 8.8219 12.7529 0.5372 22 6 7.5495 10.3618 3.6001 23 6 7.0181 9.0819 3.6163 24 6 6.0327 4.2722 -0.0008 25 6 5.4484 2.8576 -0.0001 26 1 -0.3633 0.5137 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3632 -1.0277 0.0005 29 1 1.8933 -0.5137 -0.8900 30 1 1.8935 -0.5138 0.8899 31 1 2.3611 3.7407 1.2505 32 1 3.7860 3.1511 2.1394 33 1 3.6985 5.6293 2.1409 34 1 3.6970 5.6302 0.3607 35 1 6.3734 6.7927 0.4118 36 1 7.9691 10.6170 0.2654 37 1 9.3955 12.3489 2.8867 38 1 6.6829 13.2596 2.3950 39 1 7.5738 12.6733 -0.2633 40 1 9.3899 14.1227 0.4583 41 1 7.6905 10.9130 4.5181 42 1 6.7375 8.6173 4.5500 43 1 5.6959 4.8047 -0.8903 44 1 7.1213 4.2160 -0.0018 45 1 5.7844 2.3258 -0.8903 46 1 5.7845 2.3251 0.8896 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13287726.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:29:29 Heat of formation + Delta-G solvation = -127.331922 kcal Electronic energy + Delta-G solvation = -28287.359539 eV Core-core repulsion = 24143.091527 eV Total energy + Delta-G solvation = -4144.268012 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.96597 -41.65475 -40.53116 -39.01060 -38.08198 -37.49925 -35.38457 -33.88175 -33.03596 -32.73315 -31.90264 -30.92857 -27.87850 -25.58270 -25.04940 -24.10711 -23.87378 -23.37126 -22.04143 -21.58512 -20.96683 -19.23601 -18.76196 -18.59017 -17.92646 -17.54009 -17.51997 -16.89075 -16.72730 -16.56382 -16.22172 -16.12209 -15.65257 -15.34099 -15.15743 -14.86977 -14.56687 -14.47554 -14.42705 -14.33026 -14.09289 -13.82225 -13.54667 -13.51981 -13.31543 -12.90395 -12.77566 -12.73920 -12.51827 -12.41440 -12.27635 -12.16780 -11.66838 -11.47929 -11.44140 -11.36185 -11.15633 -11.14237 -10.80944 -10.64887 -10.36257 -10.04774 -5.12719 -0.59702 0.02871 1.06348 1.25231 1.43203 1.62535 1.67186 1.81804 1.98502 2.67632 2.91206 3.13632 3.39079 3.44987 3.49996 3.56648 3.64776 3.72652 3.87004 3.89423 3.97550 4.00422 4.02218 4.09960 4.13723 4.21973 4.26710 4.31021 4.32059 4.34935 4.50634 4.56869 4.66040 4.75334 4.79227 4.81756 4.89493 4.93470 4.95029 5.01521 5.03543 5.06218 5.17671 5.23363 5.32523 5.44657 5.52665 6.17789 6.31813 6.61414 6.80432 7.13659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.112 0.888 8 C -0.108 4.108 9 C -0.128 4.128 10 C 0.140 3.860 11 H 0.093 0.907 12 N -0.707 5.707 13 C 0.573 3.427 14 O -0.528 6.528 15 C 0.081 3.919 16 N -0.453 5.453 17 C 0.103 3.897 18 C -0.149 4.149 19 C -0.074 4.074 20 O -0.526 6.526 21 Si 0.685 3.315 22 C -0.053 4.053 23 C -0.108 4.108 24 C -0.125 4.125 25 C -0.100 4.100 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.082 0.918 32 H 0.073 0.927 33 H 0.076 0.924 34 H 0.071 0.929 35 H 0.412 0.588 36 H 0.164 0.836 37 H 0.126 0.874 38 H 0.378 0.622 39 H -0.255 1.255 40 H -0.251 1.251 41 H 0.148 0.852 42 H 0.153 0.847 43 H 0.074 0.926 44 H 0.079 0.921 45 H 0.080 0.920 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.210 1.884 -3.200 3.720 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.130 0.870 8 C -0.146 4.146 9 C -0.166 4.166 10 C 0.036 3.964 11 H 0.111 0.889 12 N -0.358 5.358 13 C 0.358 3.642 14 O -0.403 6.403 15 C -0.057 4.057 16 N -0.164 5.164 17 C -0.056 4.056 18 C -0.151 4.151 19 C -0.184 4.184 20 O -0.332 6.332 21 Si 0.585 3.415 22 C -0.079 4.079 23 C -0.129 4.129 24 C -0.163 4.163 25 C -0.139 4.139 26 H 0.086 0.914 27 H 0.086 0.914 28 H 0.100 0.900 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.101 0.899 32 H 0.091 0.909 33 H 0.095 0.905 34 H 0.089 0.911 35 H 0.248 0.752 36 H 0.181 0.819 37 H 0.143 0.857 38 H 0.226 0.774 39 H -0.179 1.179 40 H -0.176 1.176 41 H 0.165 0.835 42 H 0.170 0.830 43 H 0.093 0.907 44 H 0.098 0.902 45 H 0.099 0.901 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 0.350 1.316 -3.460 3.719 hybrid contribution -0.848 0.811 0.758 1.397 sum -0.498 2.127 -2.702 3.475 Atomic orbital electron populations 1.21819 0.92366 1.03236 1.03638 1.23074 0.95574 0.79923 1.02720 1.86507 1.24458 1.32671 1.83791 1.23744 0.80666 0.92621 0.72182 1.90688 1.60449 1.43168 1.45009 1.21181 0.96740 0.89810 1.02276 0.87046 1.21492 1.01753 0.95241 0.96096 1.21928 0.94673 0.96618 1.03415 1.21138 0.93241 0.82041 0.99989 0.88852 1.45889 1.63753 1.16664 1.09458 1.17853 0.78045 0.84179 0.84133 1.90821 1.50426 1.67660 1.31400 1.21191 0.99500 0.95249 0.89808 1.67522 1.09231 1.11254 1.28368 1.22619 0.95279 0.89984 0.97725 1.21593 1.00457 0.98321 0.94762 1.25018 0.95157 0.85512 1.12732 1.86635 1.27764 1.60679 1.58136 0.95029 0.86415 0.85692 0.74339 1.21562 0.93961 0.93895 0.98471 1.22232 0.96517 0.94518 0.99631 1.21824 1.01673 0.95427 0.97389 1.21402 0.91497 0.96451 1.04503 0.91368 0.91388 0.90043 0.91141 0.91118 0.89910 0.90874 0.90543 0.91050 0.75193 0.81891 0.85665 0.77425 1.17945 1.17574 0.83455 0.82977 0.90703 0.90193 0.90121 0.90381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.22 10.29 37.16 0.38 0.60 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.63 10.12 -39.27 -0.40 -1.03 16 4 C 0.47 0.97 7.26 36.00 0.26 1.23 16 5 O -0.51 -2.52 15.73 -18.75 -0.29 -2.81 16 6 C -0.08 0.07 2.63 -91.78 -0.24 -0.17 16 7 H 0.11 -0.26 8.14 -51.93 -0.42 -0.69 16 8 C -0.11 0.11 5.13 -26.73 -0.14 -0.03 16 9 C -0.13 0.12 5.50 -26.73 -0.15 -0.03 16 10 C 0.14 -0.09 2.45 -67.93 -0.17 -0.26 16 11 H 0.09 0.11 7.58 -51.93 -0.39 -0.29 16 12 N -0.71 0.10 5.07 -54.64 -0.28 -0.18 16 13 C 0.57 1.33 7.78 -12.18 -0.09 1.23 16 14 O -0.53 -2.75 15.99 5.35 0.09 -2.67 16 15 C 0.08 0.11 6.75 -83.01 -0.56 -0.45 16 16 N -0.45 -0.17 9.54 -9.80 -0.09 -0.26 16 17 C 0.10 -0.13 9.84 -17.57 -0.17 -0.30 16 18 C -0.15 0.22 5.40 -104.36 -0.56 -0.34 16 19 C -0.07 0.17 2.83 36.01 0.10 0.27 16 20 O -0.53 0.34 12.78 -35.23 -0.45 -0.11 16 21 Si 0.69 -1.95 29.82 -169.99 -5.07 -7.02 16 22 C -0.05 0.05 9.76 -39.31 -0.38 -0.34 16 23 C -0.11 -0.05 9.63 -39.05 -0.38 -0.43 16 24 C -0.13 0.28 5.39 -26.70 -0.14 0.14 16 25 C -0.10 0.10 4.50 -26.71 -0.12 -0.02 16 26 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 29 H 0.07 0.04 8.13 -51.93 -0.42 -0.39 16 30 H 0.07 0.05 8.13 -51.93 -0.42 -0.38 16 31 H 0.08 -0.09 8.11 -51.93 -0.42 -0.52 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.41 -0.65 7.93 -40.82 -0.32 -0.97 16 36 H 0.16 -0.58 4.89 -52.49 -0.26 -0.83 16 37 H 0.13 -0.39 7.96 -51.93 -0.41 -0.80 16 38 H 0.38 -1.27 8.70 45.56 0.40 -0.87 16 39 H -0.25 0.26 7.11 56.52 0.40 0.66 16 40 H -0.25 -0.17 7.11 56.52 0.40 0.24 16 41 H 0.15 -0.31 8.06 -52.49 -0.42 -0.74 16 42 H 0.15 0.04 7.64 -52.49 -0.40 -0.36 16 43 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 44 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 45 H 0.08 -0.05 8.10 -51.93 -0.42 -0.47 16 46 H 0.08 0.01 8.10 -51.93 -0.42 -0.41 16 LS Contribution 381.21 15.07 5.74 5.74 Total: 0.00 -8.30 381.21 -9.81 -18.10 By element: Atomic # 1 Polarization: -4.20 SS G_CDS: -6.92 Total: -11.12 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: -2.13 Total: 1.36 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.37 Total: -0.45 kcal Atomic # 8 Polarization: -5.56 SS G_CDS: -1.06 Total: -6.62 kcal Atomic # 14 Polarization: -1.95 SS G_CDS: -5.07 Total: -7.02 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -8.30 -9.81 -18.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13287726.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.227 kcal (2) G-P(sol) polarization free energy of solvation -8.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.524 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.105 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds