Wall clock time and date at job start Sun Mar 7 2021 02:29:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.09003 * 109.46535 * 60.00663 * 6 4 3 8 8 C 1.53003 * 109.47116 * 180.02562 * 6 4 3 9 9 C 1.52994 * 109.47081 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47125 * 299.99933 * 9 8 6 11 11 H 1.09003 * 109.47546 * 299.99948 * 10 9 8 12 12 N 1.46500 * 109.47223 * 180.02562 * 10 9 8 13 13 C 1.34780 * 120.00050 * 155.00040 * 12 10 9 14 14 O 1.21583 * 119.99762 * 0.02562 * 13 12 10 15 15 C 1.47609 * 120.00133 * 179.97438 * 13 12 10 16 16 C 1.39710 * 120.08845 * 180.02562 * 15 13 12 17 17 C 1.37720 * 119.90858 * 179.97438 * 16 15 13 18 18 C 1.50700 * 119.95365 * 179.97438 * 17 16 15 19 19 O 1.42894 * 109.47157 * 105.00177 * 18 17 16 20 20 Si 1.86296 * 109.47327 * 344.99923 * 18 17 16 21 21 C 1.38978 * 120.09193 * 359.97438 * 17 16 15 22 22 O 1.35704 * 119.91113 * 180.02562 * 21 17 16 23 23 C 1.39017 * 120.17464 * 359.97438 * 21 17 16 24 24 C 1.50696 * 119.95689 * 180.02562 * 23 21 17 25 25 C 1.37687 * 120.08491 * 359.79425 * 23 21 17 26 26 C 1.53003 * 109.47087 * 60.00071 * 10 9 8 27 27 C 1.52994 * 109.47081 * 299.99956 * 26 10 9 28 28 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 30 30 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 31 31 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 32 32 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 33 33 H 1.09000 * 109.47151 * 300.00236 * 8 6 4 34 34 H 1.09003 * 109.46860 * 60.00013 * 8 6 4 35 35 H 1.09003 * 109.47577 * 60.00068 * 9 8 6 36 36 H 1.09005 * 109.47167 * 180.02562 * 9 8 6 37 37 H 0.96993 * 120.00057 * 334.99580 * 12 10 9 38 38 H 1.08001 * 120.04280 * 359.97438 * 16 15 13 39 39 H 1.09007 * 109.47244 * 225.00038 * 18 17 16 40 40 H 0.96706 * 114.00144 * 299.99912 * 19 18 17 41 41 H 1.48505 * 110.00339 * 179.97438 * 20 18 17 42 42 H 1.48501 * 110.00246 * 301.31893 * 20 18 17 43 43 H 0.96698 * 114.00193 * 89.99647 * 22 21 17 44 44 H 1.08992 * 109.47593 * 90.00266 * 24 23 21 45 45 H 1.09005 * 109.47107 * 210.00897 * 24 23 21 46 46 H 1.09006 * 109.46678 * 329.99895 * 24 23 21 47 47 H 1.08005 * 120.03833 * 180.22783 * 25 23 21 48 48 H 1.09003 * 109.46860 * 60.00328 * 26 10 9 49 49 H 1.09000 * 109.47151 * 180.02562 * 26 10 9 50 50 H 1.09003 * 109.47577 * 299.99932 * 27 26 10 51 51 H 1.09005 * 109.47167 * 179.97438 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.5844 3.4699 0.8896 8 6 5.4487 2.8573 0.0001 9 6 6.0335 4.2711 0.0002 10 6 5.5620 5.0180 -1.2490 11 1 5.8981 4.4859 -2.1391 12 7 6.1225 6.3716 -1.2493 13 6 6.2861 7.0330 -2.4122 14 8 5.9682 6.5064 -3.4609 15 6 6.8503 8.3970 -2.4124 16 6 7.0202 9.0845 -3.6167 17 6 7.5464 10.3572 -3.6126 18 6 7.7307 11.0995 -4.9111 19 8 6.7200 12.1021 -5.0342 20 14 7.5967 9.9045 -6.3340 21 6 7.9078 10.9579 -2.4125 22 8 8.4254 12.2124 -2.4127 23 6 7.7392 10.2776 -1.2120 24 6 8.1321 10.9339 0.0864 25 6 7.2094 9.0068 -1.2073 26 6 4.0341 5.0981 -1.2492 27 6 3.4493 3.6843 -1.2493 28 1 -0.3635 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 1.8933 -0.5138 -0.8900 32 1 1.8933 -0.5139 0.8900 33 1 5.7846 2.3255 0.8903 34 1 5.7846 2.3247 -0.8897 35 1 5.6975 4.8033 0.8902 36 1 7.1220 4.2140 -0.0002 37 1 6.3757 6.7918 -0.4126 38 1 6.7393 8.6185 -4.5496 39 1 8.7135 11.5708 -4.9239 40 1 5.8179 11.7537 -5.0302 41 1 7.7760 10.6242 -7.6205 42 1 8.6221 8.8387 -6.2006 43 1 7.7620 12.9117 -2.3359 44 1 7.2807 11.4830 0.4883 45 1 8.4419 10.1705 0.8002 46 1 8.9583 11.6228 -0.0901 47 1 7.0754 8.4803 -0.2738 48 1 3.6981 5.6303 -0.3592 49 1 3.6982 5.6299 -2.1394 50 1 3.7853 3.1521 -2.1392 51 1 2.3608 3.7414 -1.2489 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13287732.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:29:38 Heat of formation + Delta-G solvation = -186.164830 kcal Electronic energy + Delta-G solvation = -32866.142062 eV Core-core repulsion = 28310.528964 eV Total energy + Delta-G solvation = -4555.613098 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.89997 -41.60962 -40.62628 -39.09654 -37.86568 -37.60388 -37.42454 -35.42831 -34.05386 -32.85302 -32.20089 -31.94298 -30.53108 -28.12077 -26.91873 -25.87162 -24.54698 -23.93872 -23.49835 -22.20114 -21.85070 -21.49913 -20.83419 -19.59903 -18.83772 -18.59681 -18.08569 -17.72288 -17.55437 -17.38151 -16.82288 -16.46526 -16.21429 -16.09861 -15.77259 -15.55799 -15.31220 -15.12096 -14.90494 -14.72437 -14.51188 -14.48021 -14.18709 -14.15054 -13.92277 -13.85274 -13.59261 -13.38763 -13.36677 -13.07393 -12.93256 -12.82964 -12.79398 -12.53526 -12.45060 -12.32355 -12.31113 -12.00395 -11.70525 -11.66387 -11.50160 -11.47178 -11.27413 -10.92930 -10.47319 -10.18095 -10.02788 -9.69582 -4.98585 -0.42031 0.02296 1.22833 1.26692 1.61957 1.64818 1.70336 1.99479 1.99944 2.55274 3.05009 3.34380 3.40919 3.42637 3.49124 3.51367 3.58998 3.67264 3.82175 3.90919 3.95833 3.97159 3.99898 4.09324 4.13688 4.17367 4.21610 4.27630 4.29412 4.30904 4.43392 4.49388 4.52532 4.58261 4.62065 4.62793 4.73199 4.80158 4.84564 4.89772 4.95315 4.98484 4.99907 5.03283 5.04252 5.05124 5.14607 5.19808 5.23303 5.38221 5.49187 5.50837 6.38421 6.48681 6.54216 6.78074 7.13259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.101 4.101 9 C -0.126 4.126 10 C 0.142 3.858 11 H 0.094 0.906 12 N -0.723 5.723 13 C 0.562 3.438 14 O -0.530 6.530 15 C -0.139 4.139 16 C -0.045 4.045 17 C -0.151 4.151 18 C -0.059 4.059 19 O -0.538 6.538 20 Si 0.678 3.322 21 C 0.161 3.839 22 O -0.489 6.489 23 C -0.118 4.118 24 C -0.115 4.115 25 C -0.066 4.066 26 C -0.127 4.127 27 C -0.108 4.108 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.068 0.932 31 H 0.071 0.929 32 H 0.070 0.930 33 H 0.080 0.920 34 H 0.078 0.922 35 H 0.073 0.927 36 H 0.078 0.922 37 H 0.400 0.600 38 H 0.145 0.855 39 H 0.119 0.881 40 H 0.378 0.622 41 H -0.250 1.250 42 H -0.255 1.255 43 H 0.400 0.600 44 H 0.073 0.927 45 H 0.071 0.929 46 H 0.077 0.923 47 H 0.132 0.868 48 H 0.070 0.930 49 H 0.078 0.922 50 H 0.073 0.927 51 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.252 1.600 5.018 6.769 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.139 4.139 9 C -0.164 4.164 10 C 0.038 3.962 11 H 0.112 0.888 12 N -0.375 5.375 13 C 0.350 3.650 14 O -0.407 6.407 15 C -0.142 4.142 16 C -0.063 4.063 17 C -0.152 4.152 18 C -0.170 4.170 19 O -0.343 6.343 20 Si 0.579 3.421 21 C 0.115 3.885 22 O -0.301 6.301 23 C -0.118 4.118 24 C -0.171 4.171 25 C -0.085 4.085 26 C -0.166 4.166 27 C -0.146 4.146 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.098 0.902 34 H 0.096 0.904 35 H 0.092 0.908 36 H 0.097 0.903 37 H 0.235 0.765 38 H 0.162 0.838 39 H 0.137 0.863 40 H 0.226 0.774 41 H -0.175 1.175 42 H -0.179 1.179 43 H 0.258 0.742 44 H 0.092 0.908 45 H 0.089 0.911 46 H 0.096 0.904 47 H 0.150 0.850 48 H 0.089 0.911 49 H 0.096 0.904 50 H 0.091 0.909 51 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -2.820 0.632 3.489 4.531 hybrid contribution 0.096 0.492 1.027 1.142 sum -2.724 1.123 4.516 5.392 Atomic orbital electron populations 1.21819 0.92345 1.03251 1.03646 1.23075 0.95586 0.79903 1.02723 1.86504 1.24431 1.32691 1.83781 1.23739 0.80685 0.92615 0.72203 1.90689 1.60466 1.43164 1.44995 1.21178 0.96671 0.89838 1.02293 0.87093 1.21390 0.91563 0.96422 1.04512 1.21822 1.01594 0.95566 0.97398 1.21098 0.93226 0.82015 0.99908 0.88801 1.45962 1.65306 1.17191 1.08996 1.18128 0.77848 0.85205 0.83854 1.90814 1.50224 1.68484 1.31143 1.19824 1.05308 0.95049 0.94045 1.20954 0.95077 0.92439 0.97823 1.20654 1.02395 0.95859 0.96340 1.24934 0.94828 0.97461 0.99737 1.86514 1.17767 1.33875 1.96185 0.94830 0.91192 0.78746 0.77292 1.18315 0.92881 0.86502 0.90773 1.84657 1.36408 1.13299 1.95727 1.20219 1.00614 0.95422 0.95592 1.20737 1.02352 1.01104 0.92936 1.21101 0.96191 0.94043 0.97121 1.21923 0.94639 0.96592 1.03423 1.21496 1.01777 0.95276 0.96076 0.90037 0.91396 0.91341 0.91110 0.91152 0.90165 0.90367 0.90837 0.90300 0.76490 0.83754 0.86328 0.77449 1.17460 1.17904 0.74201 0.90791 0.91053 0.90429 0.84990 0.91142 0.90380 0.90865 0.89876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.48 10.12 -39.26 -0.40 -0.88 16 4 C 0.46 0.78 7.26 36.01 0.26 1.04 16 5 O -0.51 -2.35 15.73 -18.75 -0.29 -2.65 16 6 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 7 H 0.11 -0.33 8.14 -51.93 -0.42 -0.76 16 8 C -0.10 0.15 4.49 -26.73 -0.12 0.03 16 9 C -0.13 0.39 5.39 -26.74 -0.14 0.25 16 10 C 0.14 -0.23 2.45 -67.93 -0.17 -0.39 16 11 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 12 N -0.72 1.30 5.03 -54.82 -0.28 1.02 16 13 C 0.56 0.62 7.73 -12.44 -0.10 0.52 16 14 O -0.53 -2.38 16.00 5.29 0.08 -2.30 16 15 C -0.14 -0.02 5.87 -104.96 -0.62 -0.64 16 16 C -0.04 -0.02 8.20 -39.22 -0.32 -0.35 16 17 C -0.15 -0.06 5.27 -104.54 -0.55 -0.61 16 18 C -0.06 -0.02 2.37 36.01 0.09 0.07 16 19 O -0.54 0.15 12.88 -35.23 -0.45 -0.31 16 20 Si 0.68 0.21 29.91 -169.99 -5.08 -4.87 16 21 C 0.16 0.05 6.66 -39.02 -0.26 -0.21 16 22 O -0.49 -0.01 11.84 -18.82 -0.22 -0.23 16 23 C -0.12 0.10 5.89 -104.54 -0.62 -0.51 16 24 C -0.11 0.29 9.78 36.00 0.35 0.64 16 25 C -0.07 0.11 9.18 -39.22 -0.36 -0.25 16 26 C -0.13 0.24 5.50 -26.73 -0.15 0.10 16 27 C -0.11 0.18 5.14 -26.74 -0.14 0.04 16 28 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 32 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 33 H 0.08 -0.09 8.10 -51.93 -0.42 -0.51 16 34 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 35 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 36 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 37 H 0.40 -1.75 6.62 -40.82 -0.27 -2.02 16 38 H 0.15 0.02 4.70 -52.49 -0.25 -0.22 16 39 H 0.12 0.17 7.82 -51.93 -0.41 -0.23 16 40 H 0.38 -1.53 8.70 45.56 0.40 -1.14 16 41 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 42 H -0.25 -0.84 7.11 56.52 0.40 -0.44 16 43 H 0.40 -1.39 9.06 45.56 0.41 -0.98 16 44 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 45 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 46 H 0.08 -0.12 7.52 -51.93 -0.39 -0.51 16 47 H 0.13 -0.60 6.40 -52.48 -0.34 -0.93 16 48 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 49 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 50 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 51 H 0.08 -0.15 8.11 -51.93 -0.42 -0.57 16 LS Contribution 414.50 15.07 6.25 6.25 Total: 0.00 -9.76 414.50 -10.05 -19.80 By element: Atomic # 1 Polarization: -9.12 SS G_CDS: -7.19 Total: -16.31 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -2.46 Total: 0.48 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -0.28 Total: 1.02 kcal Atomic # 8 Polarization: -5.09 SS G_CDS: -1.28 Total: -6.37 kcal Atomic # 14 Polarization: 0.21 SS G_CDS: -5.08 Total: -4.87 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -9.76 -10.05 -19.80 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13287732.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.360 kcal (2) G-P(sol) polarization free energy of solvation -9.756 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.116 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.049 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.805 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds