Wall clock time and date at job start Sun Mar 7 2021 02:29:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45203 * 109.46837 * 2 1 4 4 C 1.34229 * 116.99579 * 180.02562 * 3 2 1 5 5 O 1.20824 * 120.00177 * 0.02562 * 4 3 2 6 6 C 1.50703 * 119.99682 * 179.97438 * 4 3 2 7 7 H 1.09001 * 109.46980 * 299.99944 * 6 4 3 8 8 C 1.53006 * 109.47126 * 59.99713 * 6 4 3 9 9 C 1.52997 * 109.47127 * 179.97438 * 8 6 4 10 10 C 1.53000 * 109.47060 * 300.00449 * 9 8 6 11 11 H 1.09001 * 109.47194 * 299.99650 * 10 9 8 12 12 N 1.46499 * 109.46840 * 180.02562 * 10 9 8 13 13 C 1.34782 * 120.00074 * 155.00031 * 12 10 9 14 14 O 1.21546 * 119.99820 * 359.97438 * 13 12 10 15 15 C 1.47837 * 119.99938 * 179.97438 * 13 12 10 16 16 C 1.39523 * 120.55995 * 359.71994 * 15 13 12 17 17 N 1.31695 * 120.56312 * 179.68097 * 16 15 13 18 18 C 1.31926 * 121.88310 * 0.63409 * 17 16 15 19 19 C 1.38352 * 121.07722 * 359.65287 * 18 17 16 20 20 C 1.50699 * 120.34811 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.46869 * 119.97972 * 20 19 18 22 22 Si 1.86298 * 109.47249 * 359.97438 * 20 19 18 23 23 C 1.38356 * 119.30335 * 0.02562 * 19 18 17 24 24 C 1.52996 * 109.47328 * 60.00126 * 10 9 8 25 25 C 1.52997 * 109.47084 * 179.97438 * 6 4 3 26 26 H 1.08998 * 109.46790 * 179.97438 * 1 2 3 27 27 H 1.08993 * 109.47437 * 299.99801 * 1 2 3 28 28 H 1.09000 * 109.47218 * 59.99963 * 1 2 3 29 29 H 1.09003 * 109.46711 * 240.00428 * 2 1 3 30 30 H 1.09000 * 109.47218 * 120.00037 * 2 1 3 31 31 H 1.08998 * 109.46505 * 59.99690 * 8 6 4 32 32 H 1.08996 * 109.46884 * 300.00571 * 8 6 4 33 33 H 1.09002 * 109.47153 * 180.02562 * 9 8 6 34 34 H 1.09001 * 109.46832 * 60.00321 * 9 8 6 35 35 H 0.97002 * 120.00427 * 334.99530 * 12 10 9 36 36 H 1.07995 * 119.71764 * 0.02562 * 16 15 13 37 37 H 1.07998 * 119.46296 * 179.67816 * 18 17 16 38 38 H 1.08997 * 109.47379 * 239.97939 * 20 19 18 39 39 H 0.96699 * 114.00479 * 299.99846 * 21 20 19 40 40 H 1.48499 * 109.99909 * 58.67892 * 22 20 19 41 41 H 1.48497 * 110.00118 * 179.97438 * 22 20 19 42 42 H 1.07998 * 120.85755 * 180.02562 * 23 19 18 43 43 H 1.08992 * 109.47554 * 59.99639 * 24 10 9 44 44 H 1.09004 * 109.47108 * 179.97438 * 24 10 9 45 45 H 1.09002 * 109.47045 * 60.00033 * 25 6 4 46 46 H 1.09001 * 109.47375 * 299.99958 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9207 2.9375 -0.0012 7 1 3.5844 3.4693 -0.8912 8 6 3.4495 3.6848 1.2481 9 6 4.0348 5.0984 1.2477 10 6 5.5626 5.0178 1.2475 11 1 5.8986 4.4858 2.1375 12 7 6.1230 6.3714 1.2478 13 6 7.3583 6.5893 1.7410 14 8 8.0071 5.6628 2.1859 15 6 7.9239 7.9552 1.7408 16 6 7.1916 9.0262 1.2277 17 7 7.6929 10.2440 1.2332 18 6 8.8977 10.4994 1.7061 19 6 9.6891 9.4912 2.2270 20 6 11.0627 9.8016 2.7633 21 8 11.1281 9.4388 4.1440 22 14 11.4024 11.6245 2.5834 23 6 9.2060 8.1949 2.2502 24 6 6.0338 4.2706 -0.0017 25 6 5.4486 2.8574 -0.0010 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 -0.3634 0.5138 -0.8900 29 1 1.8933 -0.5138 -0.8901 30 1 1.8934 -0.5138 0.8900 31 1 3.7857 3.1529 2.1380 32 1 2.3610 3.7417 1.2484 33 1 3.6994 5.6307 2.1379 34 1 3.6988 5.6305 0.3577 35 1 5.6051 7.1109 0.8930 36 1 6.2030 8.8560 0.8276 37 1 9.2723 11.5122 1.6866 38 1 11.8077 9.2363 2.2035 39 1 10.4914 9.9041 4.7036 40 1 10.3749 12.4073 3.3160 41 1 12.7539 11.9437 3.1094 42 1 9.8022 7.3887 2.6515 43 1 5.6979 4.8026 -0.8917 44 1 7.1223 4.2136 -0.0021 45 1 5.7846 2.3249 -0.8908 46 1 5.7845 2.3257 0.8892 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13287814.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:29:47 Heat of formation + Delta-G solvation = -126.200695 kcal Electronic energy + Delta-G solvation = -28366.907408 eV Core-core repulsion = 24222.688450 eV Total energy + Delta-G solvation = -4144.218958 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.02821 -41.68224 -40.59259 -39.03102 -38.10915 -37.54001 -35.49021 -33.79234 -33.37896 -32.71180 -31.96724 -30.83169 -27.36831 -26.36730 -24.97310 -24.09145 -23.81570 -23.55288 -21.99666 -21.59402 -20.93245 -19.30345 -18.64479 -18.34022 -18.05428 -17.78701 -17.56475 -17.47506 -16.87202 -16.56363 -16.19152 -16.00239 -15.64876 -15.35656 -15.07975 -15.02327 -14.67503 -14.47102 -14.41924 -14.24706 -14.15372 -13.85598 -13.61312 -13.49607 -13.39400 -12.91683 -12.84457 -12.80924 -12.57955 -12.45172 -12.30839 -12.12028 -11.74603 -11.51445 -11.48200 -11.39149 -11.22153 -11.08237 -10.75915 -10.56844 -10.41124 -10.16493 -5.10059 -0.60704 -0.05325 1.09614 1.22396 1.45767 1.63640 1.69947 1.83129 1.92438 2.60273 2.97960 3.19269 3.32656 3.37656 3.47549 3.53518 3.57096 3.65992 3.71417 3.80110 3.94250 3.97437 3.99449 4.04202 4.07190 4.15559 4.18121 4.23931 4.28598 4.28655 4.43208 4.50002 4.60143 4.70967 4.78252 4.79141 4.82821 4.85828 4.88897 4.93744 4.99975 5.06147 5.12696 5.19615 5.26108 5.36010 5.49773 6.23802 6.29521 6.59224 6.77821 7.04351 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.504 6.504 6 C -0.081 4.081 7 H 0.112 0.888 8 C -0.107 4.107 9 C -0.125 4.125 10 C 0.142 3.858 11 H 0.094 0.906 12 N -0.722 5.722 13 C 0.566 3.434 14 O -0.526 6.526 15 C -0.189 4.189 16 C 0.140 3.860 17 N -0.478 5.478 18 C 0.128 3.872 19 C -0.178 4.178 20 C -0.071 4.071 21 O -0.525 6.525 22 Si 0.685 3.315 23 C 0.011 3.989 24 C -0.128 4.128 25 C -0.102 4.102 26 H 0.081 0.919 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.073 0.927 32 H 0.085 0.915 33 H 0.079 0.921 34 H 0.076 0.924 35 H 0.400 0.600 36 H 0.162 0.838 37 H 0.163 0.837 38 H 0.125 0.875 39 H 0.377 0.623 40 H -0.255 1.255 41 H -0.250 1.250 42 H 0.152 0.848 43 H 0.070 0.930 44 H 0.077 0.923 45 H 0.078 0.922 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.395 3.807 -2.809 6.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.391 6.391 6 C -0.100 4.100 7 H 0.130 0.870 8 C -0.145 4.145 9 C -0.163 4.163 10 C 0.038 3.962 11 H 0.112 0.888 12 N -0.373 5.373 13 C 0.352 3.648 14 O -0.402 6.402 15 C -0.194 4.194 16 C -0.019 4.019 17 N -0.185 5.185 18 C -0.028 4.028 19 C -0.180 4.180 20 C -0.182 4.182 21 O -0.331 6.331 22 Si 0.585 3.415 23 C -0.015 4.015 24 C -0.167 4.167 25 C -0.140 4.140 26 H 0.100 0.900 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.092 0.908 32 H 0.104 0.896 33 H 0.097 0.903 34 H 0.094 0.906 35 H 0.236 0.764 36 H 0.179 0.821 37 H 0.180 0.820 38 H 0.143 0.857 39 H 0.225 0.775 40 H -0.180 1.180 41 H -0.175 1.175 42 H 0.170 0.830 43 H 0.088 0.912 44 H 0.095 0.905 45 H 0.097 0.903 46 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -3.586 3.854 -2.617 5.879 hybrid contribution -0.307 -0.924 1.104 1.472 sum -3.893 2.930 -1.513 5.102 Atomic orbital electron populations 1.21819 0.92339 1.03259 1.03620 1.23079 0.95573 0.79907 1.02746 1.86500 1.24445 1.32703 1.83836 1.23739 0.80666 0.92637 0.72292 1.90696 1.60455 1.43142 1.44829 1.21180 0.96875 0.89818 1.02084 0.87030 1.21473 1.01808 0.94827 0.96415 1.21812 0.93523 0.97365 1.03612 1.21116 0.92985 0.82242 0.99860 0.88803 1.45957 1.16893 1.10910 1.63573 1.18007 0.81446 0.87760 0.77611 1.90829 1.59497 1.44076 1.45803 1.21047 0.97328 0.94996 1.06017 1.23041 0.98950 0.87196 0.92722 1.67735 1.12876 1.22211 1.15698 1.22900 0.89257 0.99089 0.91518 1.21373 0.99042 0.94541 1.03043 1.24999 0.95076 1.13858 0.84230 1.86648 1.62202 1.67388 1.16908 0.95093 0.81075 0.73309 0.91994 1.21640 0.92952 0.96774 0.90119 1.21929 1.01883 0.95087 0.97804 1.21405 0.91238 0.96927 1.04434 0.90036 0.91375 0.91382 0.91131 0.91121 0.90803 0.89592 0.90258 0.90567 0.76434 0.82144 0.82000 0.85725 0.77493 1.17982 1.17494 0.82994 0.91176 0.90458 0.90349 0.90468 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.66 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.44 10.12 -39.25 -0.40 -0.84 16 4 C 0.46 0.82 7.26 36.01 0.26 1.08 16 5 O -0.50 -2.52 15.73 -18.75 -0.29 -2.81 16 6 C -0.08 0.10 2.63 -91.77 -0.24 -0.14 16 7 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 8 C -0.11 0.28 5.14 -26.73 -0.14 0.14 16 9 C -0.13 0.46 5.39 -26.73 -0.14 0.32 16 10 C 0.14 -0.23 2.45 -67.93 -0.17 -0.39 16 11 H 0.09 0.06 7.58 -51.93 -0.39 -0.34 16 12 N -0.72 1.37 5.03 -54.75 -0.28 1.10 16 13 C 0.57 0.69 7.75 -12.33 -0.10 0.60 16 14 O -0.53 -2.71 16.08 5.32 0.09 -2.63 16 15 C -0.19 -0.04 5.89 -104.82 -0.62 -0.66 16 16 C 0.14 -0.16 10.71 -17.13 -0.18 -0.34 16 17 N -0.48 -0.12 10.35 -12.91 -0.13 -0.26 16 18 C 0.13 -0.11 9.84 -17.47 -0.17 -0.28 16 19 C -0.18 0.12 5.39 -104.54 -0.56 -0.44 16 20 C -0.07 0.09 2.83 36.01 0.10 0.20 16 21 O -0.53 -0.22 12.78 -35.23 -0.45 -0.67 16 22 Si 0.69 -1.55 29.82 -169.99 -5.07 -6.62 16 23 C 0.01 0.01 9.31 -38.87 -0.36 -0.35 16 24 C -0.13 0.16 5.50 -26.76 -0.15 0.01 16 25 C -0.10 0.04 4.49 -26.76 -0.12 -0.08 16 26 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 30 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.09 -0.26 8.11 -51.93 -0.42 -0.68 16 33 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 34 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 35 H 0.40 -1.90 6.67 -40.82 -0.27 -2.17 16 36 H 0.16 -0.71 6.42 -52.49 -0.34 -1.05 16 37 H 0.16 -0.48 4.88 -52.49 -0.26 -0.74 16 38 H 0.13 -0.25 7.96 -51.93 -0.41 -0.67 16 39 H 0.38 -0.92 8.70 45.56 0.40 -0.53 16 40 H -0.26 0.12 7.11 56.52 0.40 0.52 16 41 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 42 H 0.15 0.23 7.74 -52.49 -0.41 -0.17 16 43 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 44 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 45 H 0.08 0.03 8.10 -51.93 -0.42 -0.39 16 46 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 LS Contribution 378.98 15.07 5.71 5.71 Total: 0.00 -9.67 378.98 -9.59 -19.25 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -6.79 Total: -12.79 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -1.97 Total: 0.56 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.41 Total: 0.84 kcal Atomic # 8 Polarization: -5.90 SS G_CDS: -1.06 Total: -6.95 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.07 Total: -6.62 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -9.67 -9.59 -19.25 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13287814.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.946 kcal (2) G-P(sol) polarization free energy of solvation -9.665 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.611 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.255 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds