Wall clock time and date at job start Sun Mar 7 2021 02:29:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45203 * 109.46837 * 2 1 4 4 C 1.34226 * 116.99798 * 180.02562 * 3 2 1 5 5 O 1.20824 * 119.99959 * 359.97438 * 4 3 2 6 6 C 1.50703 * 119.99900 * 180.02562 * 4 3 2 7 7 H 1.09001 * 109.46980 * 59.99650 * 6 4 3 8 8 C 1.53000 * 109.46912 * 179.97438 * 6 4 3 9 9 C 1.52997 * 109.47060 * 179.97438 * 8 6 4 10 10 C 1.53006 * 109.47127 * 300.00449 * 9 8 6 11 11 H 1.09001 * 109.47002 * 299.99574 * 10 9 8 12 12 N 1.46504 * 109.46883 * 180.02562 * 10 9 8 13 13 C 1.34773 * 120.00111 * 84.99828 * 12 10 9 14 14 O 1.21607 * 119.99961 * 359.97438 * 13 12 10 15 15 C 1.47373 * 119.99874 * 179.97438 * 13 12 10 16 16 C 1.36420 * 127.19701 * 180.02562 * 15 13 12 17 17 C 1.50707 * 125.79428 * 359.96506 * 16 15 13 18 18 O 1.33645 * 108.40252 * 179.97438 * 16 15 13 19 19 C 1.34213 * 110.90803 * 359.97438 * 18 16 15 20 20 C 1.50699 * 125.43923 * 179.97438 * 19 18 16 21 21 O 1.42903 * 109.47543 * 244.98077 * 20 19 18 22 22 Si 1.86300 * 109.47040 * 4.98136 * 20 19 18 23 23 C 1.34179 * 109.12729 * 359.74984 * 19 18 16 24 24 C 1.52997 * 109.47164 * 59.99836 * 10 9 8 25 25 C 1.52996 * 109.46946 * 299.99539 * 6 4 3 26 26 H 1.08998 * 109.46790 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47218 * 300.00037 * 1 2 3 28 28 H 1.08993 * 109.46973 * 59.99936 * 1 2 3 29 29 H 1.09000 * 109.47218 * 239.99963 * 2 1 3 30 30 H 1.09003 * 109.46958 * 120.00063 * 2 1 3 31 31 H 1.09002 * 109.47398 * 300.00078 * 8 6 4 32 32 H 1.09001 * 109.47194 * 60.00258 * 8 6 4 33 33 H 1.08998 * 109.47533 * 59.99948 * 9 8 6 34 34 H 1.08996 * 109.47853 * 180.02562 * 9 8 6 35 35 H 0.97003 * 119.99624 * 264.99510 * 12 10 9 36 36 H 1.09000 * 109.47023 * 90.00415 * 17 16 15 37 37 H 1.09002 * 109.46745 * 209.99938 * 17 16 15 38 38 H 1.09000 * 109.47241 * 330.00269 * 17 16 15 39 39 H 1.08998 * 109.47225 * 124.97669 * 20 19 18 40 40 H 0.96701 * 114.00080 * 179.97438 * 21 20 19 41 41 H 1.48505 * 109.99959 * 299.99896 * 22 20 19 42 42 H 1.48500 * 110.00059 * 61.31322 * 22 20 19 43 43 H 1.07996 * 127.02694 * 180.26029 * 23 19 18 44 44 H 1.09002 * 109.47045 * 180.02562 * 24 10 9 45 45 H 1.09001 * 109.47375 * 59.99966 * 24 10 9 46 46 H 1.08992 * 109.47554 * 299.99877 * 25 6 4 47 47 H 1.09004 * 109.47108 * 60.00127 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.5851 3.4691 0.8905 8 6 5.4486 2.8574 -0.0001 9 6 6.0334 4.2712 -0.0002 10 6 5.5616 5.0182 -1.2494 11 1 5.8974 4.4861 -2.1395 12 7 6.1221 6.3718 -1.2498 13 6 7.3570 6.5897 -1.7435 14 8 8.0063 5.6627 -2.1882 15 6 7.9206 7.9514 -1.7443 16 6 9.1456 8.3368 -2.2045 17 6 10.1838 7.4296 -2.8133 18 8 9.2687 9.6552 -2.0236 19 6 8.1645 10.1660 -1.4570 20 6 7.9528 11.6166 -1.1077 21 8 7.8441 11.7542 0.3105 22 14 9.3981 12.6201 -1.7200 23 6 7.2772 9.1799 -1.2557 24 6 4.0337 5.0983 -1.2492 25 6 3.4486 3.6851 -1.2486 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 1.8934 -0.5138 -0.8900 30 1 1.8934 -0.5139 0.8900 31 1 5.7846 2.3249 0.8896 32 1 5.7845 2.3257 -0.8904 33 1 5.6975 4.8035 0.8897 34 1 7.1218 4.2143 -0.0008 35 1 5.6042 7.1112 -0.8947 36 1 10.0323 7.3762 -3.8914 37 1 11.1782 7.8246 -2.6053 38 1 10.0917 6.4322 -2.3835 39 1 7.0370 11.9738 -1.5787 40 1 7.7067 12.6640 0.6080 41 1 10.6530 12.1429 -1.0853 42 1 9.5028 12.5109 -3.1973 43 1 6.2925 9.2697 -0.8214 44 1 3.6976 5.6300 -2.1394 45 1 3.6978 5.6304 -0.3592 46 1 3.7841 3.1536 -2.1390 47 1 2.3600 3.7421 -1.2481 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13308374.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:29:51 Heat of formation + Delta-G solvation = -152.016573 kcal Electronic energy + Delta-G solvation = -29332.110936 eV Core-core repulsion = 25061.742377 eV Total energy + Delta-G solvation = -4270.368559 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.74743 -41.74346 -40.70922 -38.96908 -38.02228 -37.50549 -35.31336 -34.12325 -33.22935 -32.74159 -31.91263 -30.98430 -29.39310 -26.20762 -25.27526 -24.28337 -23.83220 -23.44850 -22.24841 -21.62600 -21.13684 -20.38755 -18.82415 -18.61315 -18.38548 -17.63680 -17.53101 -17.28428 -17.10514 -16.95607 -16.01435 -15.91981 -15.78519 -15.36711 -15.24978 -14.94714 -14.77728 -14.48895 -14.27205 -14.20062 -14.09703 -13.99207 -13.90893 -13.77718 -13.55418 -13.34481 -13.12244 -12.89318 -12.74544 -12.57852 -12.53358 -12.40076 -12.25059 -12.11466 -11.68491 -11.48548 -11.40444 -11.25514 -10.90381 -10.86785 -10.56010 -10.05879 -9.55092 -5.15322 0.30148 0.82384 1.07999 1.25158 1.48700 1.61935 1.67081 1.97632 2.15643 2.38206 3.17370 3.41289 3.49582 3.53094 3.60313 3.71408 3.74846 3.88251 3.96262 4.00325 4.05296 4.08212 4.09128 4.16568 4.23538 4.29307 4.30646 4.34258 4.40267 4.53956 4.56496 4.63867 4.65159 4.73876 4.79271 4.80638 4.89114 4.91790 4.99123 5.01820 5.09782 5.11441 5.18809 5.22047 5.28953 5.49038 5.53356 5.93138 6.38625 6.51682 6.80502 7.26166 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.060 3.940 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.504 6.504 6 C -0.080 4.080 7 H 0.111 0.889 8 C -0.101 4.101 9 C -0.128 4.128 10 C 0.143 3.857 11 H 0.093 0.907 12 N -0.721 5.721 13 C 0.595 3.405 14 O -0.537 6.537 15 C -0.252 4.252 16 C 0.094 3.906 17 C -0.086 4.086 18 O -0.176 6.176 19 C -0.015 4.015 20 C -0.035 4.035 21 O -0.543 6.543 22 Si 0.708 3.292 23 C -0.142 4.142 24 C -0.125 4.125 25 C -0.107 4.107 26 H 0.081 0.919 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.077 0.923 32 H 0.076 0.924 33 H 0.068 0.932 34 H 0.076 0.924 35 H 0.401 0.599 36 H 0.092 0.908 37 H 0.080 0.920 38 H 0.113 0.887 39 H 0.095 0.905 40 H 0.391 0.609 41 H -0.249 1.249 42 H -0.253 1.253 43 H 0.160 0.840 44 H 0.078 0.922 45 H 0.074 0.926 46 H 0.073 0.927 47 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.947 6.580 0.843 8.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.391 6.391 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.140 4.140 9 C -0.167 4.167 10 C 0.039 3.961 11 H 0.111 0.889 12 N -0.371 5.371 13 C 0.384 3.616 14 O -0.416 6.416 15 C -0.256 4.256 16 C 0.041 3.959 17 C -0.142 4.142 18 O -0.073 6.073 19 C -0.062 4.062 20 C -0.144 4.144 21 O -0.351 6.351 22 Si 0.607 3.393 23 C -0.162 4.162 24 C -0.163 4.163 25 C -0.145 4.145 26 H 0.100 0.900 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.087 0.913 34 H 0.095 0.905 35 H 0.235 0.765 36 H 0.111 0.889 37 H 0.099 0.901 38 H 0.131 0.869 39 H 0.113 0.887 40 H 0.240 0.760 41 H -0.173 1.173 42 H -0.177 1.177 43 H 0.178 0.822 44 H 0.097 0.903 45 H 0.093 0.907 46 H 0.092 0.908 47 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.199 5.106 -0.002 6.025 hybrid contribution -0.840 -0.340 0.356 0.974 sum -4.039 4.765 0.354 6.257 Atomic orbital electron populations 1.21818 0.92352 1.03243 1.03614 1.23076 0.95564 0.79939 1.02737 1.86501 1.24467 1.32673 1.83847 1.23749 0.80645 0.92646 0.72261 1.90693 1.60454 1.43142 1.44854 1.21180 0.96914 0.89772 1.02086 0.87081 1.21413 0.91203 0.96986 1.04350 1.21941 1.01857 0.94988 0.97911 1.21067 0.92835 0.82512 0.99670 0.88916 1.45817 1.16956 1.10593 1.63748 1.17118 0.81119 0.86502 0.76904 1.90779 1.59618 1.44029 1.47156 1.21129 0.96897 0.94454 1.13134 1.22952 0.96080 0.80500 0.96368 1.20715 0.94682 0.97355 1.01485 1.83692 1.38552 1.21996 1.63103 1.21048 0.85894 0.95317 1.03946 1.23786 1.11009 0.92590 0.87046 1.86464 1.96302 1.33824 1.18511 0.95287 0.76817 0.86685 0.80489 1.22542 1.00975 0.89914 1.02729 1.21793 0.93720 0.97243 1.03506 1.21460 1.01730 0.94892 0.96387 0.90042 0.91390 0.91378 0.91127 0.91144 0.90421 0.90491 0.91308 0.90494 0.76482 0.88926 0.90131 0.86860 0.88683 0.76013 1.17331 1.17711 0.82242 0.90342 0.90703 0.90827 0.89660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.62 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.61 10.12 -39.25 -0.40 -1.01 16 4 C 0.46 1.08 7.26 36.01 0.26 1.34 16 5 O -0.50 -2.76 15.73 -18.75 -0.29 -3.06 16 6 C -0.08 0.04 2.63 -91.77 -0.24 -0.20 16 7 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 8 C -0.10 -0.05 4.49 -26.73 -0.12 -0.17 16 9 C -0.13 0.00 5.49 -26.73 -0.15 -0.15 16 10 C 0.14 -0.04 2.45 -67.93 -0.17 -0.20 16 11 H 0.09 0.16 7.57 -51.93 -0.39 -0.24 16 12 N -0.72 -0.12 5.07 -54.89 -0.28 -0.40 16 13 C 0.60 1.97 7.78 -12.54 -0.10 1.87 16 14 O -0.54 -3.22 14.51 5.27 0.08 -3.15 16 15 C -0.25 -0.79 6.31 -103.27 -0.65 -1.44 16 16 C 0.09 0.33 7.37 -34.96 -0.26 0.07 16 17 C -0.09 -0.13 9.89 36.01 0.36 0.23 16 18 O -0.18 -0.70 8.90 7.68 0.07 -0.63 16 19 C -0.01 -0.04 6.22 -35.74 -0.22 -0.26 16 20 C -0.03 0.03 2.96 36.01 0.11 0.14 16 21 O -0.54 0.60 12.86 -35.23 -0.45 0.14 16 22 Si 0.71 -0.91 32.09 -169.99 -5.46 -6.36 16 23 C -0.14 -0.23 10.48 -37.45 -0.39 -0.62 16 24 C -0.12 0.31 5.39 -26.76 -0.14 0.17 16 25 C -0.11 0.19 5.13 -26.76 -0.14 0.05 16 26 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 30 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 31 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 32 H 0.08 0.13 8.10 -51.93 -0.42 -0.29 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 34 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 35 H 0.40 -0.84 7.77 -40.82 -0.32 -1.16 16 36 H 0.09 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 38 H 0.11 0.27 6.49 -51.93 -0.34 -0.07 16 39 H 0.10 -0.34 7.96 -51.93 -0.41 -0.75 16 40 H 0.39 -2.55 8.74 45.56 0.40 -2.16 16 41 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 42 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 43 H 0.16 -0.19 7.74 -52.49 -0.41 -0.60 16 44 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 45 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 47 H 0.08 -0.19 8.11 -51.93 -0.42 -0.62 16 LS Contribution 390.26 15.07 5.88 5.88 Total: 0.00 -10.37 390.26 -9.52 -19.89 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: -7.42 Total: -13.01 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -1.24 Total: 1.71 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.28 Total: -0.40 kcal Atomic # 8 Polarization: -6.70 SS G_CDS: -1.00 Total: -7.70 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.46 Total: -6.36 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -10.37 -9.52 -19.89 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13308374.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.131 kcal (2) G-P(sol) polarization free energy of solvation -10.366 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.886 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds