Wall clock time and date at job start Sun Mar 7 2021 02:30:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45199 * 109.47043 * 2 1 4 4 C 1.34233 * 116.99626 * 180.02562 * 3 2 1 5 5 O 1.20825 * 119.99989 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99638 * 180.02562 * 4 3 2 7 7 H 1.09000 * 109.47353 * 59.99515 * 6 4 3 8 8 C 1.53002 * 109.47178 * 180.02562 * 6 4 3 9 9 C 1.52995 * 109.47440 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.47000 * 299.99879 * 9 8 6 11 11 H 1.09000 * 109.46880 * 299.99689 * 10 9 8 12 12 N 1.46497 * 109.47223 * 179.97438 * 10 9 8 13 13 C 1.34779 * 120.00430 * 154.99662 * 12 10 9 14 14 O 1.21593 * 119.99372 * 0.02562 * 13 12 10 15 15 C 1.47534 * 120.00006 * 180.02562 * 13 12 10 16 16 C 1.40142 * 120.18777 * 180.02562 * 15 13 12 17 17 O 1.35655 * 120.15066 * 359.97438 * 16 15 13 18 18 C 1.38705 * 119.69771 * 180.02562 * 16 15 13 19 19 C 1.38054 * 120.08635 * 359.97438 * 18 16 15 20 20 C 1.50693 * 119.80708 * 179.97438 * 19 18 16 21 21 O 1.42907 * 109.47661 * 300.00721 * 20 19 18 22 22 Si 1.86298 * 109.47618 * 180.02562 * 20 19 18 23 23 C 1.38548 * 120.38929 * 0.26014 * 19 18 16 24 24 C 1.37792 * 120.29832 * 359.48077 * 23 19 18 25 25 C 1.52998 * 109.47430 * 59.99799 * 10 9 8 26 26 C 1.52999 * 109.46963 * 300.00337 * 25 10 9 27 27 H 1.09002 * 109.47360 * 60.00102 * 1 2 3 28 28 H 1.08999 * 109.47284 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47039 * 300.00100 * 1 2 3 30 30 H 1.08997 * 109.46704 * 239.99762 * 2 1 3 31 31 H 1.09004 * 109.46862 * 119.99737 * 2 1 3 32 32 H 1.08994 * 109.47098 * 59.99330 * 8 6 4 33 33 H 1.09007 * 109.46501 * 299.99966 * 8 6 4 34 34 H 1.08998 * 109.46990 * 179.97438 * 9 8 6 35 35 H 1.09000 * 109.47050 * 59.99463 * 9 8 6 36 36 H 0.97004 * 119.99899 * 335.00248 * 12 10 9 37 37 H 0.96696 * 114.00004 * 270.02118 * 17 16 15 38 38 H 1.08002 * 119.95676 * 179.97438 * 18 16 15 39 39 H 1.09000 * 109.46936 * 60.00344 * 20 19 18 40 40 H 0.96697 * 114.00527 * 179.97438 * 21 20 19 41 41 H 1.48506 * 109.99834 * 298.68714 * 22 20 19 42 42 H 1.48502 * 110.00011 * 59.99978 * 22 20 19 43 43 H 1.07994 * 119.84982 * 179.74159 * 23 19 18 44 44 H 1.07998 * 120.04661 * 180.27720 * 24 23 19 45 45 H 1.09001 * 109.46928 * 59.99585 * 25 10 9 46 46 H 1.08996 * 109.47452 * 179.97438 * 25 10 9 47 47 H 1.08994 * 109.47257 * 299.99640 * 26 25 10 48 48 H 1.09010 * 109.47175 * 180.02562 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.5852 3.4690 0.8904 8 6 5.4487 2.8573 -0.0014 9 6 6.0335 4.2711 -0.0015 10 6 5.5608 5.0184 -1.2501 11 1 5.8960 4.4865 -2.1405 12 7 6.1203 6.3723 -1.2499 13 6 6.2829 7.0346 -2.4125 14 8 5.9648 6.5083 -3.4615 15 6 6.8469 8.3978 -2.4123 16 6 7.0172 9.0902 -3.6188 17 8 6.6647 8.5097 -4.7931 18 6 7.5488 10.3713 -3.6068 19 6 7.9076 10.9605 -2.4110 20 6 8.4852 12.3523 -2.4053 21 8 9.6875 12.3724 -3.1775 22 14 8.8644 12.8604 -0.6535 23 6 7.7453 10.2774 -1.2165 24 6 7.2138 9.0062 -1.2094 25 6 4.0329 5.0985 -1.2488 26 6 3.4482 3.6847 -1.2486 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 1.8932 -0.5139 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 5.7838 2.3258 -0.8920 33 1 5.7853 2.3245 0.8880 34 1 7.1220 4.2140 -0.0021 35 1 5.6983 4.8030 0.8889 36 1 6.3738 6.7923 -0.4130 37 1 7.3756 8.0052 -5.2114 38 1 7.6823 10.9085 -4.5341 39 1 7.7644 13.0465 -2.8373 40 1 10.1146 13.2391 -3.2181 41 1 7.6173 12.8742 0.1526 42 1 9.8464 11.9216 -0.0537 43 1 8.0328 10.7451 -0.2865 44 1 7.0849 8.4792 -0.2756 45 1 3.6978 5.6303 -0.3583 46 1 3.6962 5.6313 -2.1381 47 1 3.7833 3.1528 -2.1390 48 1 2.3596 3.7417 -1.2482 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13422076.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:01 Heat of formation + Delta-G solvation = -175.510602 kcal Electronic energy + Delta-G solvation = -30687.244225 eV Core-core repulsion = 26287.630748 eV Total energy + Delta-G solvation = -4399.613477 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.86131 -41.52901 -40.27803 -38.94702 -38.29170 -37.49032 -37.24722 -35.29264 -33.21259 -32.67265 -31.92436 -31.16540 -30.75853 -27.56663 -25.50280 -24.03624 -23.89312 -23.83900 -23.09670 -21.95877 -21.47195 -20.92707 -19.32083 -18.72375 -18.59054 -18.54019 -17.76173 -17.54411 -17.49920 -16.80800 -16.55593 -16.28112 -16.07634 -15.53933 -15.52408 -15.36529 -15.21086 -14.90362 -14.67326 -14.46283 -14.18684 -14.16704 -13.98199 -13.83358 -13.57896 -13.38909 -13.29985 -12.93100 -12.91031 -12.78053 -12.55776 -12.52041 -12.42335 -12.29834 -12.12874 -11.76183 -11.68172 -11.48921 -11.45326 -11.23891 -10.74338 -10.54065 -10.15584 -10.02796 -9.80539 -5.08590 -0.42806 0.06928 1.12681 1.23779 1.51406 1.65982 1.75532 1.83443 2.03606 2.54205 3.08724 3.17105 3.42843 3.45844 3.51193 3.58282 3.65113 3.68514 3.85475 3.96787 3.98309 3.99167 4.01140 4.11069 4.16722 4.18394 4.19143 4.25639 4.30292 4.32449 4.52617 4.54400 4.63533 4.66564 4.74261 4.81100 4.85936 4.90291 4.91097 5.00048 5.02096 5.05570 5.08341 5.16972 5.17754 5.22250 5.43838 5.48768 5.51573 6.43365 6.46945 6.69603 6.79019 7.21366 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.100 4.100 9 C -0.126 4.126 10 C 0.143 3.857 11 H 0.093 0.907 12 N -0.726 5.726 13 C 0.561 3.439 14 O -0.515 6.515 15 C -0.166 4.166 16 C 0.175 3.825 17 O -0.475 6.475 18 C -0.125 4.125 19 C -0.031 4.031 20 C -0.079 4.079 21 O -0.544 6.544 22 Si 0.688 3.312 23 C -0.143 4.143 24 C -0.063 4.063 25 C -0.128 4.128 26 C -0.108 4.108 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.071 0.929 31 H 0.070 0.930 32 H 0.078 0.922 33 H 0.080 0.920 34 H 0.078 0.922 35 H 0.072 0.928 36 H 0.398 0.602 37 H 0.399 0.601 38 H 0.142 0.858 39 H 0.081 0.919 40 H 0.385 0.615 41 H -0.253 1.253 42 H -0.249 1.249 43 H 0.127 0.873 44 H 0.134 0.866 45 H 0.069 0.931 46 H 0.077 0.923 47 H 0.072 0.928 48 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.968 5.402 3.866 6.713 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.138 4.138 9 C -0.164 4.164 10 C 0.039 3.961 11 H 0.111 0.889 12 N -0.378 5.378 13 C 0.348 3.652 14 O -0.391 6.391 15 C -0.169 4.169 16 C 0.129 3.871 17 O -0.286 6.286 18 C -0.144 4.144 19 C -0.031 4.031 20 C -0.189 4.189 21 O -0.351 6.351 22 Si 0.588 3.412 23 C -0.161 4.161 24 C -0.082 4.082 25 C -0.166 4.166 26 C -0.146 4.146 27 H 0.087 0.913 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.096 0.904 33 H 0.099 0.901 34 H 0.097 0.903 35 H 0.091 0.909 36 H 0.233 0.767 37 H 0.258 0.742 38 H 0.160 0.840 39 H 0.098 0.902 40 H 0.233 0.767 41 H -0.178 1.178 42 H -0.173 1.173 43 H 0.144 0.856 44 H 0.151 0.849 45 H 0.088 0.912 46 H 0.096 0.904 47 H 0.091 0.909 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.216 4.061 3.964 5.679 hybrid contribution 0.215 -0.491 0.028 0.536 sum 0.431 3.570 3.992 5.373 Atomic orbital electron populations 1.21821 0.92342 1.03248 1.03649 1.23077 0.95593 0.79902 1.02721 1.86507 1.24428 1.32697 1.83775 1.23733 0.80684 0.92600 0.72183 1.90687 1.60466 1.43153 1.45024 1.21178 0.96679 0.89840 1.02283 0.87096 1.21387 0.91560 0.96405 1.04494 1.21820 1.01549 0.95571 0.97421 1.21064 0.93177 0.82027 0.99805 0.88895 1.45984 1.65733 1.17155 1.08967 1.18004 0.78279 0.84969 0.83952 1.90837 1.49228 1.68136 1.30901 1.20416 1.06714 0.95579 0.94239 1.18486 0.92327 0.90937 0.85394 1.84749 1.41056 1.69837 1.33006 1.21324 0.98938 0.95118 0.99000 1.19433 0.96267 0.94478 0.92966 1.24785 0.89595 0.95872 1.08675 1.86480 1.37865 1.36948 1.73806 0.95081 0.82647 0.89143 0.74282 1.20796 1.02650 0.95436 0.97199 1.21079 0.95733 0.94471 0.96880 1.21926 0.94744 0.96569 1.03402 1.21493 1.01767 0.95263 0.96068 0.91346 0.90024 0.91395 0.91110 0.91143 0.90376 0.90147 0.90320 0.90885 0.76666 0.74243 0.83977 0.90155 0.76650 1.17772 1.17314 0.85587 0.84850 0.91207 0.90447 0.90883 0.89897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 10.29 37.16 0.38 0.57 16 2 C 0.06 0.05 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.72 10.12 -39.27 -0.40 -1.11 16 4 C 0.47 1.09 7.25 36.01 0.26 1.35 16 5 O -0.51 -2.63 15.73 -18.75 -0.29 -2.93 16 6 C -0.08 0.04 2.63 -91.77 -0.24 -0.20 16 7 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 8 C -0.10 0.08 4.49 -26.73 -0.12 -0.04 16 9 C -0.13 0.28 5.39 -26.73 -0.14 0.13 16 10 C 0.14 -0.06 2.45 -67.93 -0.17 -0.22 16 11 H 0.09 0.15 7.58 -51.93 -0.39 -0.24 16 12 N -0.73 0.23 5.03 -54.85 -0.28 -0.05 16 13 C 0.56 1.62 7.73 -12.47 -0.10 1.52 16 14 O -0.52 -3.24 14.82 -16.59 -0.25 -3.48 16 15 C -0.17 -0.36 5.89 -104.85 -0.62 -0.97 16 16 C 0.18 0.50 6.72 -38.69 -0.26 0.24 16 17 O -0.48 -1.59 11.58 -40.54 -0.47 -2.06 16 18 C -0.13 -0.24 9.53 -39.48 -0.38 -0.61 16 19 C -0.03 -0.04 5.43 -104.58 -0.57 -0.61 16 20 C -0.08 0.09 2.80 36.00 0.10 0.19 16 21 O -0.54 0.51 12.74 -35.23 -0.45 0.06 16 22 Si 0.69 -1.61 29.77 -169.99 -5.06 -6.67 16 23 C -0.14 -0.10 8.65 -39.63 -0.34 -0.45 16 24 C -0.06 0.00 9.54 -39.20 -0.37 -0.38 16 25 C -0.13 0.06 5.49 -26.73 -0.15 -0.09 16 26 C -0.11 0.06 5.13 -26.73 -0.14 -0.08 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 31 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 32 H 0.08 0.04 8.10 -51.93 -0.42 -0.38 16 33 H 0.08 -0.04 8.10 -51.92 -0.42 -0.46 16 34 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 36 H 0.40 -1.16 6.63 -40.82 -0.27 -1.43 16 37 H 0.40 -0.11 9.06 45.56 0.41 0.30 16 38 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 39 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 40 H 0.39 -2.27 8.74 45.56 0.40 -1.87 16 41 H -0.25 0.02 7.11 56.52 0.40 0.42 16 42 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 43 H 0.13 -0.04 4.85 -52.49 -0.25 -0.29 16 44 H 0.13 -0.42 6.40 -52.49 -0.34 -0.75 16 45 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 46 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 47 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 48 H 0.08 -0.06 8.11 -51.92 -0.42 -0.48 16 LS Contribution 392.74 15.07 5.92 5.92 Total: 0.00 -10.79 392.74 -10.28 -21.07 By element: Atomic # 1 Polarization: -4.99 SS G_CDS: -6.39 Total: -11.38 kcal Atomic # 6 Polarization: 3.26 SS G_CDS: -2.62 Total: 0.64 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -0.28 Total: -0.05 kcal Atomic # 8 Polarization: -7.67 SS G_CDS: -1.86 Total: -9.53 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.06 Total: -6.67 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -10.79 -10.28 -21.07 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13422076.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.443 kcal (2) G-P(sol) polarization free energy of solvation -10.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.232 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.067 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds