Wall clock time and date at job start Sun Mar 7 2021 02:30:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45206 * 109.46720 * 2 1 4 4 C 1.34236 * 116.99523 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00100 * 0.02562 * 4 3 2 6 6 C 1.50694 * 119.99808 * 180.02562 * 4 3 2 7 7 H 1.08998 * 109.47333 * 300.00202 * 6 4 3 8 8 C 1.52999 * 109.47245 * 59.99825 * 6 4 3 9 9 C 1.53009 * 109.47168 * 179.97438 * 8 6 4 10 10 C 1.52995 * 109.46932 * 300.00325 * 9 8 6 11 11 H 1.08999 * 109.47409 * 299.99585 * 10 9 8 12 12 N 1.46504 * 109.47009 * 179.97438 * 10 9 8 13 13 C 1.34777 * 119.99854 * 84.99752 * 12 10 9 14 14 O 1.21593 * 119.99953 * 0.02562 * 13 12 10 15 15 C 1.47537 * 120.00133 * 180.27865 * 13 12 10 16 16 C 1.40135 * 120.19429 * 179.45067 * 15 13 12 17 17 O 1.35650 * 120.14877 * 359.97438 * 16 15 13 18 18 C 1.38709 * 119.70347 * 179.77112 * 16 15 13 19 19 C 1.50691 * 119.96235 * 180.22864 * 18 16 15 20 20 O 1.42900 * 109.47335 * 285.30004 * 19 18 16 21 21 Si 1.86304 * 109.47196 * 165.29562 * 19 18 16 22 22 C 1.38055 * 120.07970 * 0.52689 * 18 16 15 23 23 C 1.38556 * 120.39303 * 359.69924 * 22 18 16 24 24 C 1.50691 * 119.84976 * 180.02562 * 23 22 18 25 25 C 1.37787 * 120.29780 * 0.04829 * 23 22 18 26 26 C 1.53001 * 109.47151 * 60.00304 * 10 9 8 27 27 C 1.53000 * 109.46945 * 299.99244 * 26 10 9 28 28 H 1.08999 * 109.47037 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.47382 * 300.00254 * 1 2 3 30 30 H 1.09007 * 109.47020 * 59.99946 * 1 2 3 31 31 H 1.08992 * 109.47230 * 240.00213 * 2 1 3 32 32 H 1.09002 * 109.46608 * 119.99899 * 2 1 3 33 33 H 1.08991 * 109.47570 * 299.99943 * 8 6 4 34 34 H 1.08999 * 109.47029 * 60.00337 * 8 6 4 35 35 H 1.09001 * 109.46963 * 180.02562 * 9 8 6 36 36 H 1.08999 * 109.46735 * 60.00323 * 9 8 6 37 37 H 0.97000 * 120.00410 * 265.00478 * 12 10 9 38 38 H 0.96699 * 114.00678 * 89.99941 * 17 16 15 39 39 H 1.09007 * 109.47176 * 45.30231 * 19 18 16 40 40 H 0.96693 * 114.00047 * 179.97438 * 20 19 18 41 41 H 1.48501 * 109.99868 * 60.00352 * 21 19 18 42 42 H 1.48498 * 109.99813 * 181.31880 * 21 19 18 43 43 H 1.08006 * 119.80735 * 179.72887 * 22 18 16 44 44 H 1.08998 * 109.47322 * 270.02180 * 24 23 22 45 45 H 1.09002 * 109.47691 * 30.02469 * 24 23 22 46 46 H 1.09007 * 109.47085 * 150.02879 * 24 23 22 47 47 H 1.08001 * 120.04524 * 179.97438 * 25 23 22 48 48 H 1.08998 * 109.47169 * 59.99749 * 26 10 9 49 49 H 1.09002 * 109.46865 * 179.97438 * 26 10 9 50 50 H 1.08995 * 109.47334 * 180.02562 * 27 26 10 51 51 H 1.08999 * 109.47097 * 300.00402 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0808 0.5867 0.0005 6 6 3.9207 2.9374 0.0012 7 1 3.5851 3.4699 -0.8887 8 6 3.4487 3.6841 1.2504 9 6 4.0340 5.0978 1.2513 10 6 5.5618 5.0171 1.2521 11 1 5.8971 4.4845 2.1421 12 7 6.1223 6.3707 1.2524 13 6 6.2854 7.0322 2.4153 14 8 5.9678 6.5055 3.4641 15 6 6.8441 8.3977 2.4151 16 6 7.0047 9.0937 3.6208 17 8 6.6467 8.5151 4.7943 18 6 7.5354 10.3752 3.6092 19 6 7.7155 11.1269 4.9028 20 8 6.4441 11.5817 5.3704 21 14 8.8333 12.5903 4.6202 22 6 7.8931 10.9652 2.4135 23 6 7.7315 10.2823 1.2188 24 6 8.1265 10.9378 -0.0793 25 6 7.2107 9.0067 1.2123 26 6 6.0338 4.2706 0.0028 27 6 5.4486 2.8569 0.0019 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 1.8934 -0.5138 -0.8899 32 1 1.8933 -0.5138 0.8900 33 1 2.3602 3.7411 1.2501 34 1 3.7843 3.1517 2.1404 35 1 3.6980 5.6295 2.1416 36 1 3.6987 5.6303 0.3614 37 1 6.3758 6.7909 0.4157 38 1 7.3566 8.0140 5.2186 39 1 8.1618 10.4673 5.6472 40 1 6.4840 12.0745 6.2014 41 1 8.2362 13.4973 3.6073 42 1 9.0444 13.3217 5.8952 43 1 8.3019 11.9649 2.4092 44 1 7.2745 11.4831 -0.4851 45 1 8.9495 11.6301 0.0989 46 1 8.4415 10.1744 -0.7908 47 1 7.0860 8.4782 0.2786 48 1 5.6985 4.8032 -0.8871 49 1 7.1223 4.2135 0.0032 50 1 5.7851 2.3249 -0.8878 51 1 5.7839 2.3243 0.8919 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13422088.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:05 Heat of formation + Delta-G solvation = -180.229556 kcal Electronic energy + Delta-G solvation = -33058.353888 eV Core-core repulsion = 28502.998162 eV Total energy + Delta-G solvation = -4555.355725 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.85480 -41.55334 -40.31895 -38.87365 -37.99545 -37.66635 -37.44540 -35.25948 -33.29395 -33.06095 -32.63788 -31.89792 -30.64869 -27.64902 -26.78754 -25.97406 -24.63780 -23.88882 -23.49393 -22.00131 -21.75084 -21.37881 -20.75950 -19.48435 -18.62937 -18.54133 -18.25726 -17.82153 -17.52894 -17.44020 -16.68233 -16.66827 -16.07212 -15.93685 -15.57220 -15.41741 -15.25242 -15.01684 -14.86350 -14.77700 -14.60415 -14.44652 -14.12569 -14.07646 -13.82712 -13.77883 -13.53192 -13.31436 -13.20408 -13.02400 -12.89981 -12.76063 -12.73926 -12.50431 -12.41484 -12.38266 -12.27198 -11.82166 -11.66434 -11.62762 -11.47359 -11.42711 -11.21635 -10.71996 -10.44130 -10.16364 -9.98317 -9.49844 -5.05139 -0.29801 0.08090 1.18627 1.25399 1.50885 1.67805 1.79679 1.87611 2.08845 2.60480 3.16291 3.29909 3.45339 3.47536 3.56231 3.59646 3.66653 3.75955 3.87401 3.98055 4.01289 4.01851 4.03798 4.09382 4.13933 4.21474 4.24536 4.31179 4.31725 4.35164 4.36385 4.56309 4.57835 4.60723 4.65825 4.72260 4.75964 4.82332 4.89475 4.93491 4.95400 4.98146 5.02284 5.04542 5.08288 5.17275 5.21931 5.25759 5.33829 5.47850 5.53256 5.60191 6.45112 6.49111 6.78601 6.80608 7.27275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.108 4.108 9 C -0.128 4.128 10 C 0.144 3.856 11 H 0.093 0.907 12 N -0.726 5.726 13 C 0.561 3.439 14 O -0.516 6.516 15 C -0.165 4.165 16 C 0.191 3.809 17 O -0.468 6.468 18 C -0.107 4.107 19 C -0.067 4.067 20 O -0.527 6.527 21 Si 0.685 3.315 22 C -0.075 4.075 23 C -0.098 4.098 24 C -0.116 4.116 25 C -0.067 4.067 26 C -0.125 4.125 27 C -0.100 4.100 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.067 0.933 31 H 0.070 0.930 32 H 0.070 0.930 33 H 0.082 0.918 34 H 0.072 0.928 35 H 0.077 0.923 36 H 0.069 0.931 37 H 0.398 0.602 38 H 0.393 0.607 39 H 0.074 0.926 40 H 0.379 0.621 41 H -0.254 1.254 42 H -0.259 1.259 43 H 0.136 0.864 44 H 0.074 0.926 45 H 0.072 0.928 46 H 0.071 0.929 47 H 0.131 0.869 48 H 0.073 0.927 49 H 0.078 0.922 50 H 0.080 0.920 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.554 2.122 -4.108 5.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.394 6.394 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.146 4.146 9 C -0.167 4.167 10 C 0.040 3.960 11 H 0.111 0.889 12 N -0.378 5.378 13 C 0.349 3.651 14 O -0.392 6.392 15 C -0.169 4.169 16 C 0.144 3.856 17 O -0.278 6.278 18 C -0.107 4.107 19 C -0.176 4.176 20 O -0.334 6.334 21 Si 0.586 3.414 22 C -0.093 4.093 23 C -0.098 4.098 24 C -0.173 4.173 25 C -0.085 4.085 26 C -0.163 4.163 27 C -0.138 4.138 28 H 0.100 0.900 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.101 0.899 34 H 0.091 0.909 35 H 0.095 0.905 36 H 0.088 0.912 37 H 0.234 0.766 38 H 0.251 0.749 39 H 0.092 0.908 40 H 0.227 0.773 41 H -0.178 1.178 42 H -0.184 1.184 43 H 0.153 0.847 44 H 0.093 0.907 45 H 0.091 0.909 46 H 0.090 0.910 47 H 0.149 0.851 48 H 0.091 0.909 49 H 0.097 0.903 50 H 0.098 0.902 51 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 2.856 2.220 -3.941 5.350 hybrid contribution -0.433 -0.043 0.528 0.684 sum 2.423 2.177 -3.413 4.718 Atomic orbital electron populations 1.21822 0.92357 1.03236 1.03652 1.23074 0.95585 0.79916 1.02711 1.86511 1.24447 1.32677 1.83776 1.23742 0.80674 0.92617 0.72167 1.90685 1.60460 1.43164 1.45042 1.21177 0.96697 0.89816 1.02287 0.87097 1.21493 1.01754 0.95307 0.96038 1.21930 0.94815 0.96520 1.03408 1.21050 0.93124 0.82115 0.99746 0.88943 1.45972 1.65738 1.17146 1.08979 1.18013 0.78225 0.84998 0.83910 1.90836 1.49216 1.68210 1.30961 1.20360 1.06881 0.95461 0.94214 1.18217 0.91633 0.90281 0.85459 1.84804 1.40186 1.69845 1.32999 1.19608 1.01924 0.94771 0.94441 1.24637 0.92059 1.05476 0.95455 1.86650 1.27457 1.75197 1.44145 0.95224 0.86185 0.78192 0.81816 1.21120 0.97652 0.99497 0.91056 1.19771 1.00074 0.94326 0.95600 1.20831 1.02090 1.00935 0.93444 1.21120 0.96201 0.94632 0.96594 1.21819 1.01535 0.95533 0.97440 1.21387 0.91542 0.96452 1.04467 0.90037 0.91349 0.91393 0.91145 0.91118 0.89935 0.90908 0.90467 0.91201 0.76645 0.74882 0.90752 0.77314 1.17841 1.18397 0.84667 0.90727 0.90894 0.90974 0.85078 0.90878 0.90302 0.90168 0.90398 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 10.29 37.16 0.38 0.57 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.71 10.12 -39.27 -0.40 -1.10 16 4 C 0.47 1.05 7.25 36.00 0.26 1.31 16 5 O -0.51 -2.58 15.73 -18.75 -0.29 -2.88 16 6 C -0.08 0.05 2.63 -91.77 -0.24 -0.19 16 7 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 8 C -0.11 0.06 5.14 -26.73 -0.14 -0.08 16 9 C -0.13 0.06 5.49 -26.73 -0.15 -0.09 16 10 C 0.14 -0.09 2.45 -67.93 -0.17 -0.25 16 11 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 12 N -0.73 0.45 5.03 -54.85 -0.28 0.18 16 13 C 0.56 1.50 7.73 -12.47 -0.10 1.40 16 14 O -0.52 -3.22 14.82 -16.59 -0.25 -3.46 16 15 C -0.17 -0.29 5.89 -104.84 -0.62 -0.91 16 16 C 0.19 0.53 6.69 -38.70 -0.26 0.28 16 17 O -0.47 -1.70 10.91 -40.53 -0.44 -2.14 16 18 C -0.11 -0.16 5.30 -104.52 -0.55 -0.71 16 19 C -0.07 -0.02 2.36 36.00 0.09 0.06 16 20 O -0.53 -1.30 12.86 -35.23 -0.45 -1.75 16 21 Si 0.68 -0.87 30.19 -169.99 -5.13 -6.00 16 22 C -0.08 0.00 8.30 -39.53 -0.33 -0.33 16 23 C -0.10 0.09 5.87 -104.67 -0.61 -0.53 16 24 C -0.12 0.37 10.00 36.00 0.36 0.73 16 25 C -0.07 0.06 9.18 -39.20 -0.36 -0.30 16 26 C -0.13 0.32 5.39 -26.73 -0.14 0.17 16 27 C -0.10 0.10 4.49 -26.73 -0.12 -0.02 16 28 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.07 -0.08 8.14 -51.92 -0.42 -0.51 16 31 H 0.07 0.05 8.13 -51.93 -0.42 -0.38 16 32 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 33 H 0.08 -0.05 8.11 -51.93 -0.42 -0.47 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.40 -1.33 6.63 -40.82 -0.27 -1.60 16 38 H 0.39 -0.13 9.06 45.56 0.41 0.29 16 39 H 0.07 -0.09 7.84 -51.93 -0.41 -0.50 16 40 H 0.38 -0.63 8.74 45.56 0.40 -0.23 16 41 H -0.25 -0.33 6.74 56.52 0.38 0.05 16 42 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 43 H 0.14 -0.18 4.87 -52.48 -0.26 -0.44 16 44 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 45 H 0.07 -0.28 8.08 -51.93 -0.42 -0.70 16 46 H 0.07 -0.31 8.08 -51.93 -0.42 -0.73 16 47 H 0.13 -0.51 6.40 -52.49 -0.34 -0.84 16 48 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 49 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 50 H 0.08 -0.05 8.10 -51.93 -0.42 -0.48 16 51 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 LS Contribution 413.46 15.07 6.23 6.23 Total: 0.00 -11.20 413.46 -10.72 -21.92 By element: Atomic # 1 Polarization: -5.13 SS G_CDS: -7.24 Total: -12.37 kcal Atomic # 6 Polarization: 3.85 SS G_CDS: -2.47 Total: 1.38 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.28 Total: 0.18 kcal Atomic # 8 Polarization: -9.50 SS G_CDS: -1.83 Total: -11.34 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.13 Total: -6.00 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -11.20 -10.72 -21.92 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13422088.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -158.307 kcal (2) G-P(sol) polarization free energy of solvation -11.201 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -169.508 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds