Wall clock time and date at job start Sun Mar 7 2021 02:30:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45202 * 109.46919 * 2 1 4 4 C 1.34230 * 116.99836 * 180.02562 * 3 2 1 5 5 O 1.20833 * 119.99930 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00262 * 180.27336 * 4 3 2 7 7 H 1.09000 * 109.47461 * 59.71633 * 6 4 3 8 8 C 1.52996 * 109.47491 * 179.72204 * 6 4 3 9 9 C 1.53003 * 109.47301 * 179.97438 * 8 6 4 10 10 C 1.52996 * 109.46915 * 299.99916 * 9 8 6 11 11 H 1.08994 * 109.47269 * 299.99538 * 10 9 8 12 12 N 1.46507 * 109.46742 * 179.97438 * 10 9 8 13 13 C 1.34781 * 119.99696 * 155.00353 * 12 10 9 14 14 O 1.21596 * 120.00005 * 359.97438 * 13 12 10 15 15 C 1.47514 * 119.99813 * 180.02562 * 13 12 10 16 16 C 1.39774 * 120.06919 * 179.97438 * 15 13 12 17 17 C 1.37630 * 119.93416 * 180.02562 * 16 15 13 18 18 C 1.50699 * 119.96805 * 180.02562 * 17 16 15 19 19 O 1.42896 * 109.46947 * 104.99971 * 18 17 16 20 20 Si 1.86303 * 109.47140 * 345.00297 * 18 17 16 21 21 C 1.39202 * 120.06434 * 0.02562 * 17 16 15 22 22 N 1.39048 * 119.92617 * 180.02562 * 21 17 16 23 23 C 1.46900 * 111.00169 * 119.99600 * 22 21 17 24 24 C 1.46905 * 110.99994 * 243.94900 * 22 21 17 25 25 C 1.39233 * 120.13899 * 359.97438 * 21 17 16 26 26 C 1.37587 * 120.07021 * 359.76851 * 25 21 17 27 27 C 1.53003 * 109.47207 * 60.00200 * 10 9 8 28 28 C 1.53002 * 109.46796 * 299.72392 * 6 4 3 29 29 H 1.09002 * 109.47633 * 60.00402 * 1 2 3 30 30 H 1.08999 * 109.47371 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.47687 * 300.00275 * 1 2 3 32 32 H 1.08998 * 109.47242 * 239.99429 * 2 1 3 33 33 H 1.09004 * 109.46797 * 119.99245 * 2 1 3 34 34 H 1.09004 * 109.47066 * 299.99799 * 8 6 4 35 35 H 1.08994 * 109.47405 * 59.99969 * 8 6 4 36 36 H 1.09008 * 109.46785 * 59.99617 * 9 8 6 37 37 H 1.09001 * 109.47245 * 179.97438 * 9 8 6 38 38 H 0.96995 * 119.99837 * 334.99817 * 12 10 9 39 39 H 1.08005 * 120.03246 * 359.97207 * 16 15 13 40 40 H 1.08995 * 109.47234 * 224.99900 * 18 17 16 41 41 H 0.96702 * 114.00122 * 60.00478 * 19 18 17 42 42 H 1.48503 * 109.99762 * 299.99650 * 20 18 17 43 43 H 1.48496 * 109.99986 * 61.31229 * 20 18 17 44 44 H 1.09005 * 109.47074 * 59.99750 * 23 22 21 45 45 H 1.09000 * 109.47277 * 179.97438 * 23 22 21 46 46 H 1.08995 * 109.47130 * 299.99793 * 23 22 21 47 47 H 1.08997 * 109.46771 * 59.99615 * 24 22 21 48 48 H 1.08995 * 109.47370 * 180.02562 * 24 22 21 49 49 H 1.08999 * 109.46727 * 300.00214 * 24 22 21 50 50 H 1.08009 * 119.96326 * 180.02562 * 25 21 17 51 51 H 1.08006 * 120.03184 * 180.25495 * 26 25 21 52 52 H 1.08994 * 109.47116 * 59.99825 * 27 10 9 53 53 H 1.09004 * 109.47205 * 179.97438 * 27 10 9 54 54 H 1.09008 * 109.46845 * 299.99275 * 28 6 4 55 55 H 1.08993 * 109.47452 * 60.00035 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 0.0057 7 1 3.5816 3.4669 0.8960 8 6 5.4485 2.8573 0.0107 9 6 6.0334 4.2712 0.0163 10 6 5.5661 5.0213 -1.2326 11 1 5.9051 4.4915 -2.1227 12 7 6.1256 6.3753 -1.2269 13 6 6.2931 7.0401 -2.3873 14 8 5.9803 6.5159 -3.4389 15 6 6.8570 8.4032 -2.3816 16 6 7.0318 9.0938 -3.5841 17 6 7.5587 10.3653 -3.5756 18 6 7.7470 11.1108 -4.8717 19 8 6.7374 12.1144 -4.9948 20 14 7.6156 9.9195 -6.2981 21 6 7.9178 10.9633 -2.3710 22 7 8.4493 12.2481 -2.3657 23 6 7.6101 13.1618 -1.5789 24 6 9.8318 12.2439 -1.8690 25 6 7.7448 10.2780 -1.1714 26 6 7.2137 9.0087 -1.1729 27 6 4.0382 5.1014 -1.2376 28 6 3.4534 3.6881 -1.2429 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5138 0.8899 32 1 1.8933 -0.5139 -0.8899 33 1 1.8932 -0.5137 0.8901 34 1 5.7814 2.3225 0.9002 35 1 5.7876 2.3279 -0.8797 36 1 5.6943 4.8010 0.9065 37 1 7.1219 4.2141 0.0203 38 1 6.3754 6.7932 -0.3880 39 1 6.7546 8.6298 -4.5192 40 1 8.7301 11.5813 -4.8806 41 1 6.7462 12.7705 -4.2845 42 1 8.6604 8.8706 -6.1816 43 1 6.2685 9.2948 -6.3156 44 1 7.5489 12.8046 -0.5509 45 1 8.0489 14.1595 -1.5910 46 1 6.6100 13.1991 -2.0107 47 1 10.4467 11.6139 -2.5116 48 1 10.2232 13.2612 -1.8749 49 1 9.8511 11.8534 -0.8515 50 1 8.0240 10.7448 -0.2383 51 1 7.0760 8.4793 -0.2416 52 1 3.6992 5.6313 -0.3475 53 1 3.7053 5.6362 -2.1272 54 1 3.7925 3.1586 -2.1334 55 1 2.3649 3.7452 -1.2465 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_13422196.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:09 Heat of formation + Delta-G solvation = -122.765439 kcal Electronic energy + Delta-G solvation = -34973.059189 eV Core-core repulsion = 30362.376338 eV Total energy + Delta-G solvation = -4610.682851 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.208 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -42.02629 -41.74832 -40.78756 -39.19384 -37.77803 -37.67997 -37.34427 -35.58331 -33.11716 -32.71652 -31.91269 -31.75910 -30.55144 -28.56954 -26.96171 -26.54981 -25.25629 -23.92284 -23.84685 -23.23277 -22.94978 -21.98876 -21.40256 -20.80504 -19.24056 -18.77360 -18.21979 -17.89707 -17.72986 -17.66533 -17.49783 -16.74664 -16.43835 -16.31738 -16.00999 -15.89343 -15.59294 -15.32525 -15.18521 -15.08060 -14.95797 -14.69877 -14.59587 -14.20307 -14.09960 -13.93673 -13.83375 -13.60509 -13.51716 -13.33564 -13.18423 -13.04046 -12.98319 -12.83868 -12.74227 -12.65421 -12.56209 -12.45758 -12.36969 -12.26039 -11.68660 -11.58577 -11.53245 -11.48097 -11.41429 -11.22454 -10.99605 -10.33436 -10.22542 -9.88461 -9.63396 -4.94038 -0.52402 0.01924 1.04991 1.30159 1.50046 1.57915 1.58143 1.89127 1.92144 2.50218 2.68550 3.37595 3.41520 3.46437 3.53873 3.56486 3.61073 3.82641 3.86545 3.93206 3.97461 3.99287 4.01648 4.05268 4.10598 4.12308 4.22086 4.24919 4.28012 4.36023 4.37028 4.39481 4.42533 4.53247 4.58233 4.60462 4.68396 4.69686 4.78475 4.84857 4.85857 4.91256 4.97557 4.98453 4.99674 5.00190 5.03269 5.03953 5.10750 5.11793 5.17381 5.19874 5.34362 5.40671 5.43227 5.76782 6.15374 6.34122 6.61259 6.66214 7.00671 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.463 3.537 5 O -0.541 6.541 6 C -0.074 4.074 7 H 0.140 0.860 8 C -0.099 4.099 9 C -0.113 4.113 10 C 0.140 3.860 11 H 0.063 0.937 12 N -0.701 5.701 13 C 0.556 3.444 14 O -0.584 6.584 15 C -0.149 4.149 16 C -0.082 4.082 17 C -0.113 4.113 18 C -0.062 4.062 19 O -0.544 6.544 20 Si 0.793 3.207 21 C 0.133 3.867 22 N -0.524 5.524 23 C 0.022 3.978 24 C 0.025 3.975 25 C -0.148 4.148 26 C -0.056 4.056 27 C -0.120 4.120 28 C -0.103 4.103 29 H 0.067 0.933 30 H 0.096 0.904 31 H 0.071 0.929 32 H 0.064 0.936 33 H 0.069 0.931 34 H 0.083 0.917 35 H 0.056 0.944 36 H 0.103 0.897 37 H 0.085 0.915 38 H 0.418 0.582 39 H 0.110 0.890 40 H 0.096 0.904 41 H 0.375 0.625 42 H -0.276 1.276 43 H -0.302 1.302 44 H 0.043 0.957 45 H 0.092 0.908 46 H 0.070 0.930 47 H 0.064 0.936 48 H 0.091 0.909 49 H 0.043 0.957 50 H 0.159 0.841 51 H 0.167 0.833 52 H 0.095 0.905 53 H 0.051 0.949 54 H 0.054 0.946 55 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.314 6.177 8.051 10.232 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.308 3.692 5 O -0.430 6.430 6 C -0.092 4.092 7 H 0.158 0.842 8 C -0.137 4.137 9 C -0.150 4.150 10 C 0.036 3.964 11 H 0.081 0.919 12 N -0.353 5.353 13 C 0.344 3.656 14 O -0.465 6.465 15 C -0.153 4.153 16 C -0.102 4.102 17 C -0.115 4.115 18 C -0.172 4.172 19 O -0.351 6.351 20 Si 0.699 3.301 21 C 0.038 3.962 22 N -0.245 5.245 23 C -0.124 4.124 24 C -0.121 4.121 25 C -0.168 4.168 26 C -0.075 4.075 27 C -0.159 4.159 28 C -0.141 4.141 29 H 0.086 0.914 30 H 0.114 0.886 31 H 0.090 0.910 32 H 0.082 0.918 33 H 0.088 0.912 34 H 0.101 0.899 35 H 0.075 0.925 36 H 0.122 0.878 37 H 0.103 0.897 38 H 0.257 0.743 39 H 0.127 0.873 40 H 0.114 0.886 41 H 0.224 0.776 42 H -0.202 1.202 43 H -0.230 1.230 44 H 0.062 0.938 45 H 0.111 0.889 46 H 0.089 0.911 47 H 0.083 0.917 48 H 0.110 0.890 49 H 0.062 0.938 50 H 0.177 0.823 51 H 0.185 0.815 52 H 0.113 0.887 53 H 0.070 0.930 54 H 0.073 0.927 55 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 1.036 4.533 6.086 7.660 hybrid contribution 0.029 -0.597 2.214 2.293 sum 1.064 3.936 8.300 9.248 Atomic orbital electron populations 1.21822 0.90653 1.04268 1.03754 1.23244 0.96955 0.79427 1.02392 1.86516 1.24311 1.33393 1.83456 1.24329 0.80554 0.93336 0.70996 1.90673 1.61130 1.44482 1.46758 1.21254 0.96607 0.88249 1.03124 0.84199 1.21363 0.91516 0.97222 1.03616 1.21750 1.01888 0.94322 0.97064 1.21104 0.93494 0.81829 0.99991 0.91899 1.45787 1.64034 1.16807 1.08684 1.18439 0.77415 0.85730 0.83987 1.90797 1.52782 1.69887 1.33034 1.19904 1.05815 0.94601 0.94942 1.21056 0.96957 0.94451 0.97708 1.20325 1.00403 0.94089 0.96661 1.25009 0.95511 0.96190 1.00449 1.86680 1.54917 1.40923 1.52540 0.92867 0.76669 0.75067 0.85528 1.18935 0.94767 0.90879 0.91633 1.59444 1.04089 1.04958 1.56025 1.22609 0.97506 0.96616 0.95655 1.22543 0.86649 1.04063 0.98807 1.21927 1.00419 0.95327 0.99107 1.21493 0.94326 0.94853 0.96818 1.21839 0.94325 0.96425 1.03305 1.21413 1.02032 0.95047 0.95584 0.91411 0.88580 0.91034 0.91773 0.91231 0.89865 0.92518 0.87821 0.89665 0.74341 0.87295 0.88575 0.77596 1.20242 1.23049 0.93799 0.88933 0.91128 0.91690 0.89017 0.93805 0.82318 0.81524 0.88679 0.93017 0.92704 0.89388 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.40 10.29 71.98 0.74 1.14 16 2 C 0.05 0.11 6.19 71.98 0.45 0.56 16 3 O -0.36 -1.54 10.13 -51.41 -0.52 -2.06 16 4 C 0.46 2.39 7.25 71.23 0.52 2.91 16 5 O -0.54 -6.32 15.73 21.94 0.35 -5.97 16 6 C -0.07 0.13 2.63 -11.54 -0.03 0.10 16 7 H 0.14 -1.00 8.14 -2.39 -0.02 -1.02 16 8 C -0.10 0.18 4.49 30.59 0.14 0.32 16 9 C -0.11 0.69 5.39 30.59 0.16 0.86 16 10 C 0.14 -0.07 2.46 44.99 0.11 0.04 16 11 H 0.06 0.39 7.58 -2.39 -0.02 0.37 16 12 N -0.70 0.85 5.03 -445.70 -2.24 -1.39 16 13 C 0.56 4.36 7.73 86.69 0.67 5.03 16 14 O -0.58 -10.49 16.00 -4.02 -0.06 -10.55 16 15 C -0.15 -0.78 5.88 -20.08 -0.12 -0.89 16 16 C -0.08 -0.79 8.20 22.50 0.18 -0.61 16 17 C -0.11 -0.60 5.28 -19.78 -0.10 -0.70 16 18 C -0.06 -0.25 2.29 71.24 0.16 -0.09 16 19 O -0.54 -2.67 12.65 -148.98 -1.89 -4.55 16 20 Si 0.79 4.85 30.40 68.60 2.09 6.93 16 21 C 0.13 -0.02 4.66 38.47 0.18 0.16 16 22 N -0.52 1.95 3.67 -745.10 -2.73 -0.78 16 23 C 0.02 -0.16 9.20 127.69 1.18 1.02 16 24 C 0.03 -0.16 9.38 127.69 1.20 1.04 16 25 C -0.15 0.57 8.53 22.36 0.19 0.76 16 26 C -0.06 0.19 9.53 22.50 0.21 0.40 16 27 C -0.12 0.12 5.49 30.58 0.17 0.29 16 28 C -0.10 0.06 5.13 30.58 0.16 0.22 16 29 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 30 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 31 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 32 H 0.06 0.20 8.13 -2.39 -0.02 0.18 16 33 H 0.07 0.14 8.13 -2.38 -0.02 0.13 16 34 H 0.08 -0.15 8.10 -2.38 -0.02 -0.16 16 35 H 0.06 0.15 8.10 -2.39 -0.02 0.13 16 36 H 0.10 -1.18 8.14 -2.38 -0.02 -1.20 16 37 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 38 H 0.42 -3.77 6.62 -92.71 -0.61 -4.38 16 39 H 0.11 1.64 4.50 -2.91 -0.01 1.62 16 40 H 0.10 0.10 7.78 -2.39 -0.02 0.08 16 41 H 0.37 0.05 8.06 -74.06 -0.60 -0.54 16 42 H -0.28 -2.77 7.11 99.48 0.71 -2.07 16 43 H -0.30 -4.46 6.81 99.48 0.68 -3.78 16 44 H 0.04 -0.37 7.09 -2.38 -0.02 -0.39 16 45 H 0.09 -0.85 8.12 -2.39 -0.02 -0.87 16 46 H 0.07 -0.43 7.84 -2.39 -0.02 -0.45 16 47 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 48 H 0.09 -0.76 8.12 -2.39 -0.02 -0.78 16 49 H 0.04 -0.34 7.32 -2.39 -0.02 -0.36 16 50 H 0.16 -1.46 6.99 -2.91 -0.02 -1.48 16 51 H 0.17 -1.92 6.39 -2.91 -0.02 -1.94 16 52 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 53 H 0.05 0.25 8.14 -2.38 -0.02 0.23 16 54 H 0.05 0.17 8.14 -2.38 -0.02 0.15 16 55 H 0.09 -0.12 8.12 -2.39 -0.02 -0.14 16 Total: 0.00 -25.77 435.92 0.85 -24.92 By element: Atomic # 1 Polarization: -18.78 SS G_CDS: -0.30 Total: -19.08 kcal Atomic # 6 Polarization: 6.38 SS G_CDS: 6.16 Total: 12.54 kcal Atomic # 7 Polarization: 2.80 SS G_CDS: -4.97 Total: -2.17 kcal Atomic # 8 Polarization: -21.01 SS G_CDS: -2.13 Total: -23.14 kcal Atomic # 14 Polarization: 4.85 SS G_CDS: 2.09 Total: 6.93 kcal Total: -25.77 0.85 -24.92 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13422196.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.850 kcal (2) G-P(sol) polarization free energy of solvation -25.768 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.916 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds