Wall clock time and date at job start Sun Mar 7 2021 02:30:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.46982 * 2 1 4 4 C 1.34230 * 116.99776 * 179.97438 * 3 2 1 5 5 O 1.20831 * 120.00246 * 0.02562 * 4 3 2 6 6 C 1.50706 * 120.00139 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.46700 * 60.00121 * 6 4 3 8 8 C 1.52999 * 109.46957 * 180.02562 * 6 4 3 9 9 C 1.53006 * 109.46626 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47127 * 299.99539 * 9 8 6 11 11 H 1.08996 * 109.46952 * 300.00302 * 10 9 8 12 12 N 1.46496 * 109.46953 * 179.97438 * 10 9 8 13 13 C 1.34781 * 119.99775 * 154.99854 * 12 10 9 14 14 O 1.21699 * 120.00111 * 0.02562 * 13 12 10 15 15 C 1.46676 * 120.00119 * 180.02562 * 13 12 10 16 16 C 1.37874 * 126.23693 * 179.71916 * 15 13 12 17 17 C 1.50697 * 126.45236 * 359.97438 * 16 15 13 18 18 C 1.39831 * 107.08441 * 179.84832 * 16 15 13 19 19 C 1.35453 * 107.86980 * 0.41424 * 18 16 15 20 20 C 1.50692 * 125.56561 * 179.72138 * 19 18 16 21 21 O 1.42894 * 109.47444 * 120.02800 * 20 19 18 22 22 Si 1.86304 * 109.47419 * 0.02562 * 20 19 18 23 23 N 1.35538 * 108.86814 * 359.74209 * 19 18 16 24 24 C 1.53002 * 109.46817 * 60.00361 * 10 9 8 25 25 C 1.52996 * 109.46972 * 299.99733 * 24 10 9 26 26 H 1.09003 * 109.47564 * 300.00666 * 1 2 3 27 27 H 1.09011 * 109.46967 * 60.00126 * 1 2 3 28 28 H 1.08999 * 109.47198 * 179.97438 * 1 2 3 29 29 H 1.08994 * 109.47422 * 239.99964 * 2 1 3 30 30 H 1.08998 * 109.46694 * 119.99955 * 2 1 3 31 31 H 1.08993 * 109.47839 * 60.00178 * 8 6 4 32 32 H 1.09000 * 109.47160 * 299.99740 * 8 6 4 33 33 H 1.09001 * 109.46801 * 59.99811 * 9 8 6 34 34 H 1.09001 * 109.46998 * 179.97438 * 9 8 6 35 35 H 0.97001 * 120.00575 * 335.00735 * 12 10 9 36 36 H 1.09001 * 109.47204 * 90.00313 * 17 16 15 37 37 H 1.09000 * 109.46770 * 209.99933 * 17 16 15 38 38 H 1.09006 * 109.47351 * 329.99830 * 17 16 15 39 39 H 1.08001 * 126.06599 * 180.16127 * 18 16 15 40 40 H 1.09009 * 109.46974 * 240.02521 * 20 19 18 41 41 H 0.96702 * 114.00368 * 180.02562 * 21 20 19 42 42 H 1.48502 * 109.99417 * 60.00263 * 22 20 19 43 43 H 1.48496 * 109.99978 * 181.31752 * 22 20 19 44 44 H 0.96999 * 125.67597 * 180.02562 * 23 19 18 45 45 H 1.08996 * 109.47407 * 60.00219 * 24 10 9 46 46 H 1.09000 * 109.46986 * 179.97438 * 24 10 9 47 47 H 1.09001 * 109.46993 * 180.02562 * 25 24 10 48 48 H 1.09000 * 109.47380 * 299.99696 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.5844 3.4700 0.8895 8 6 5.4487 2.8572 0.0001 9 6 6.0335 4.2711 0.0002 10 6 5.5621 5.0181 -1.2491 11 1 5.8982 4.4859 -2.1390 12 7 6.1215 6.3720 -1.2487 13 6 6.2853 7.0338 -2.4113 14 8 5.9681 6.5068 -3.4614 15 6 6.8460 8.3892 -2.4110 16 6 7.0731 9.1774 -3.5192 17 6 6.7931 8.8083 -4.9531 18 6 7.6096 10.3849 -3.0614 19 6 7.7074 10.3114 -1.7124 20 6 8.2417 11.3951 -0.8120 21 8 7.2261 11.7905 0.1121 22 14 8.7506 12.8626 -1.8408 23 7 7.2466 9.1037 -1.3047 24 6 4.0342 5.0981 -1.2492 25 6 3.4494 3.6843 -1.2493 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8901 28 1 -0.3633 -1.0276 -0.0005 29 1 1.8934 -0.5138 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 5.7847 2.3248 -0.8895 32 1 5.7845 2.3255 0.8904 33 1 5.6974 4.8032 0.8902 34 1 7.1220 4.2141 0.0008 35 1 6.3742 6.7922 -0.4117 36 1 5.7790 9.1105 -5.2147 37 1 7.5034 9.3174 -5.6046 38 1 6.8945 7.7301 -5.0773 39 1 7.8988 11.2253 -3.6749 40 1 9.1054 11.0188 -0.2635 41 1 7.5006 12.4871 0.7241 42 1 7.5818 13.3849 -2.5934 43 1 9.3088 13.9260 -0.9676 44 1 7.2057 8.7945 -0.3862 45 1 3.6981 5.6303 -0.3594 46 1 3.6984 5.6307 -2.1390 47 1 2.3609 3.7414 -1.2499 48 1 3.7854 3.1522 -2.1393 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:29 Heat of formation + Delta-G solvation = -126.861758 kcal Electronic energy + Delta-G solvation = -29270.183807 eV Core-core repulsion = 25098.624705 eV Total energy + Delta-G solvation = -4171.559102 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.53425 -41.73921 -40.55111 -38.93059 -37.92798 -37.50959 -35.43852 -33.47235 -32.79783 -32.03949 -31.93711 -30.68690 -28.11887 -26.98467 -25.32798 -23.95818 -23.75323 -22.45462 -21.81921 -21.42145 -21.12423 -20.19820 -19.33857 -18.73139 -18.62409 -17.67385 -17.55688 -17.15523 -16.84359 -16.40071 -16.04791 -15.75123 -15.39935 -15.15756 -14.89816 -14.85893 -14.68265 -14.46725 -14.31637 -14.05183 -13.99654 -13.80045 -13.55392 -13.46910 -13.34411 -13.25310 -13.07376 -12.91760 -12.77528 -12.53734 -12.46403 -12.37209 -12.31286 -11.99593 -11.70063 -11.49745 -11.46829 -11.25978 -10.93256 -10.70792 -10.16065 -9.76126 -9.09354 -5.00067 0.40684 1.09782 1.23091 1.53311 1.58956 1.65306 1.88203 2.02589 2.16025 2.41731 3.07957 3.41936 3.46306 3.56437 3.68303 3.80439 3.88008 3.96387 3.97452 4.00376 4.05586 4.10206 4.17140 4.20702 4.24705 4.29931 4.30938 4.39598 4.52523 4.61978 4.73551 4.79506 4.80730 4.84809 4.89451 4.91121 4.99222 5.01799 5.04834 5.07550 5.14745 5.19373 5.27518 5.37707 5.49958 5.51337 5.71918 5.95506 6.19607 6.29227 6.47823 6.78411 7.18563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.100 4.100 9 C -0.126 4.126 10 C 0.144 3.856 11 H 0.095 0.905 12 N -0.731 5.731 13 C 0.592 3.408 14 O -0.520 6.520 15 C -0.057 4.057 16 C -0.063 4.063 17 C -0.093 4.093 18 C -0.198 4.198 19 C 0.073 3.927 20 C -0.062 4.062 21 O -0.542 6.542 22 Si 0.713 3.287 23 N -0.525 5.525 24 C -0.128 4.128 25 C -0.108 4.108 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.071 0.929 30 H 0.070 0.930 31 H 0.078 0.922 32 H 0.080 0.920 33 H 0.071 0.929 34 H 0.078 0.922 35 H 0.393 0.607 36 H 0.068 0.932 37 H 0.066 0.934 38 H 0.081 0.919 39 H 0.151 0.849 40 H 0.078 0.922 41 H 0.384 0.616 42 H -0.250 1.250 43 H -0.259 1.259 44 H 0.415 0.585 45 H 0.068 0.932 46 H 0.078 0.922 47 H 0.082 0.918 48 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.796 2.487 3.392 4.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.138 4.138 9 C -0.164 4.164 10 C 0.040 3.960 11 H 0.113 0.887 12 N -0.381 5.381 13 C 0.381 3.619 14 O -0.396 6.396 15 C -0.170 4.170 16 C -0.071 4.071 17 C -0.150 4.150 18 C -0.222 4.222 19 C -0.045 4.045 20 C -0.171 4.171 21 O -0.350 6.350 22 Si 0.611 3.389 23 N -0.121 5.121 24 C -0.166 4.166 25 C -0.146 4.146 26 H 0.086 0.914 27 H 0.087 0.913 28 H 0.100 0.900 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.097 0.903 32 H 0.098 0.902 33 H 0.090 0.910 34 H 0.097 0.903 35 H 0.227 0.773 36 H 0.087 0.913 37 H 0.085 0.915 38 H 0.100 0.900 39 H 0.168 0.832 40 H 0.096 0.904 41 H 0.233 0.767 42 H -0.174 1.174 43 H -0.184 1.184 44 H 0.253 0.747 45 H 0.087 0.913 46 H 0.096 0.904 47 H 0.101 0.899 48 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.267 2.062 2.283 3.327 hybrid contribution -0.333 0.129 2.318 2.345 sum 0.934 2.191 4.601 5.181 Atomic orbital electron populations 1.21822 0.92342 1.03252 1.03649 1.23076 0.95592 0.79891 1.02728 1.86506 1.24422 1.32708 1.83769 1.23728 0.80689 0.92591 0.72194 1.90689 1.60458 1.43153 1.45016 1.21174 0.96674 0.89860 1.02281 0.87148 1.21385 0.91561 0.96363 1.04525 1.21822 1.01538 0.95621 0.97380 1.21071 0.93170 0.81867 0.99881 0.88693 1.45957 1.66138 1.17432 1.08601 1.17013 0.77640 0.83355 0.83938 1.90842 1.50407 1.67480 1.30832 1.20211 1.14772 0.94886 0.87088 1.19910 0.99663 0.92707 0.94829 1.20393 1.01569 1.03251 0.89776 1.20538 1.09424 0.99799 0.92468 1.19792 1.04354 0.86525 0.93786 1.24597 0.92771 1.03394 0.96320 1.86567 1.39711 1.59675 1.49019 0.94323 0.85965 0.75209 0.83384 1.41809 1.48748 1.13051 1.08516 1.21927 0.94715 0.96590 1.03404 1.21491 1.01784 0.95237 0.96077 0.91398 0.91345 0.90020 0.91092 0.91149 0.90306 0.90168 0.90988 0.90340 0.77340 0.91289 0.91511 0.89984 0.83160 0.90398 0.76681 1.17360 1.18427 0.74722 0.91292 0.90377 0.89891 0.90816 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 10.29 37.16 0.38 0.59 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.65 10.12 -39.26 -0.40 -1.05 16 4 C 0.47 0.99 7.26 36.01 0.26 1.25 16 5 O -0.51 -2.53 15.73 -18.75 -0.30 -2.83 16 6 C -0.08 0.06 2.63 -91.77 -0.24 -0.18 16 7 H 0.11 -0.25 8.14 -51.93 -0.42 -0.68 16 8 C -0.10 0.10 4.49 -26.73 -0.12 -0.02 16 9 C -0.13 0.32 5.39 -26.73 -0.14 0.17 16 10 C 0.14 -0.12 2.45 -67.93 -0.17 -0.28 16 11 H 0.10 0.11 7.58 -51.93 -0.39 -0.28 16 12 N -0.73 0.54 5.07 -55.12 -0.28 0.26 16 13 C 0.59 1.49 7.75 -12.85 -0.10 1.39 16 14 O -0.52 -2.92 14.47 5.19 0.08 -2.85 16 15 C -0.06 -0.12 7.06 -81.98 -0.58 -0.70 16 16 C -0.06 -0.17 6.21 -104.16 -0.65 -0.81 16 17 C -0.09 -0.19 9.83 36.00 0.35 0.16 16 18 C -0.20 -0.24 9.27 -39.98 -0.37 -0.61 16 19 C 0.07 0.04 6.51 -81.95 -0.53 -0.49 16 20 C -0.06 0.09 3.07 36.00 0.11 0.21 16 21 O -0.54 0.31 12.86 -35.23 -0.45 -0.15 16 22 Si 0.71 -1.43 30.54 -169.99 -5.19 -6.63 16 23 N -0.52 0.01 5.99 -5.70 -0.03 -0.03 16 24 C -0.13 0.11 5.49 -26.73 -0.15 -0.04 16 25 C -0.11 0.09 5.14 -26.73 -0.14 -0.04 16 26 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.07 -0.09 8.14 -51.92 -0.42 -0.51 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 30 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 31 H 0.08 0.01 8.10 -51.93 -0.42 -0.41 16 32 H 0.08 -0.05 8.10 -51.93 -0.42 -0.47 16 33 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 34 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 35 H 0.39 -1.28 7.73 -40.82 -0.32 -1.60 16 36 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.08 0.28 6.49 -51.93 -0.34 -0.05 16 39 H 0.15 -0.11 6.17 -52.49 -0.32 -0.44 16 40 H 0.08 -0.27 7.96 -51.92 -0.41 -0.69 16 41 H 0.38 -1.72 8.74 45.56 0.40 -1.32 16 42 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 43 H -0.26 0.07 7.11 56.52 0.40 0.47 16 44 H 0.42 -1.08 8.19 -40.82 -0.33 -1.42 16 45 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 46 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 47 H 0.08 -0.08 8.11 -51.93 -0.42 -0.50 16 48 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 391.02 15.07 5.89 5.89 Total: 0.00 -9.38 391.02 -10.20 -19.59 By element: Atomic # 1 Polarization: -5.39 SS G_CDS: -7.67 Total: -13.07 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -1.85 Total: 0.86 kcal Atomic # 7 Polarization: 0.55 SS G_CDS: -0.31 Total: 0.23 kcal Atomic # 8 Polarization: -5.81 SS G_CDS: -1.07 Total: -6.88 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.19 Total: -6.63 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -9.38 -10.20 -19.59 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.277 kcal (2) G-P(sol) polarization free energy of solvation -9.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.657 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.204 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds