Wall clock time and date at job start Sun Mar 7 2021 02:30:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.46982 * 2 1 4 4 C 1.34230 * 116.99776 * 179.97438 * 3 2 1 5 5 O 1.20831 * 120.00246 * 0.02562 * 4 3 2 6 6 C 1.50706 * 120.00139 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.46700 * 60.00121 * 6 4 3 8 8 C 1.52999 * 109.46957 * 180.02562 * 6 4 3 9 9 C 1.53006 * 109.46626 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47127 * 299.99539 * 9 8 6 11 11 H 1.08996 * 109.46952 * 300.00302 * 10 9 8 12 12 N 1.46496 * 109.46953 * 179.97438 * 10 9 8 13 13 C 1.34781 * 119.99775 * 154.99854 * 12 10 9 14 14 O 1.21699 * 120.00111 * 0.02562 * 13 12 10 15 15 C 1.46676 * 120.00119 * 180.02562 * 13 12 10 16 16 C 1.37874 * 126.23693 * 179.71916 * 15 13 12 17 17 C 1.50697 * 126.45236 * 359.97438 * 16 15 13 18 18 C 1.39831 * 107.08441 * 179.84832 * 16 15 13 19 19 C 1.35453 * 107.86980 * 0.41424 * 18 16 15 20 20 C 1.50692 * 125.56561 * 179.72138 * 19 18 16 21 21 O 1.42894 * 109.47444 * 120.02800 * 20 19 18 22 22 Si 1.86304 * 109.47419 * 0.02562 * 20 19 18 23 23 N 1.35538 * 108.86814 * 359.74209 * 19 18 16 24 24 C 1.53002 * 109.46817 * 60.00361 * 10 9 8 25 25 C 1.52996 * 109.46972 * 299.99733 * 24 10 9 26 26 H 1.09003 * 109.47564 * 300.00666 * 1 2 3 27 27 H 1.09011 * 109.46967 * 60.00126 * 1 2 3 28 28 H 1.08999 * 109.47198 * 179.97438 * 1 2 3 29 29 H 1.08994 * 109.47422 * 239.99964 * 2 1 3 30 30 H 1.08998 * 109.46694 * 119.99955 * 2 1 3 31 31 H 1.08993 * 109.47839 * 60.00178 * 8 6 4 32 32 H 1.09000 * 109.47160 * 299.99740 * 8 6 4 33 33 H 1.09001 * 109.46801 * 59.99811 * 9 8 6 34 34 H 1.09001 * 109.46998 * 179.97438 * 9 8 6 35 35 H 0.97001 * 120.00575 * 335.00735 * 12 10 9 36 36 H 1.09001 * 109.47204 * 90.00313 * 17 16 15 37 37 H 1.09000 * 109.46770 * 209.99933 * 17 16 15 38 38 H 1.09006 * 109.47351 * 329.99830 * 17 16 15 39 39 H 1.08001 * 126.06599 * 180.16127 * 18 16 15 40 40 H 1.09009 * 109.46974 * 240.02521 * 20 19 18 41 41 H 0.96702 * 114.00368 * 180.02562 * 21 20 19 42 42 H 1.48502 * 109.99417 * 60.00263 * 22 20 19 43 43 H 1.48496 * 109.99978 * 181.31752 * 22 20 19 44 44 H 0.96999 * 125.67597 * 180.02562 * 23 19 18 45 45 H 1.08996 * 109.47407 * 60.00219 * 24 10 9 46 46 H 1.09000 * 109.46986 * 179.97438 * 24 10 9 47 47 H 1.09001 * 109.46993 * 180.02562 * 25 24 10 48 48 H 1.09000 * 109.47380 * 299.99696 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.5844 3.4700 0.8895 8 6 5.4487 2.8572 0.0001 9 6 6.0335 4.2711 0.0002 10 6 5.5621 5.0181 -1.2491 11 1 5.8982 4.4859 -2.1390 12 7 6.1215 6.3720 -1.2487 13 6 6.2853 7.0338 -2.4113 14 8 5.9681 6.5068 -3.4614 15 6 6.8460 8.3892 -2.4110 16 6 7.0731 9.1774 -3.5192 17 6 6.7931 8.8083 -4.9531 18 6 7.6096 10.3849 -3.0614 19 6 7.7074 10.3114 -1.7124 20 6 8.2417 11.3951 -0.8120 21 8 7.2261 11.7905 0.1121 22 14 8.7506 12.8626 -1.8408 23 7 7.2466 9.1037 -1.3047 24 6 4.0342 5.0981 -1.2492 25 6 3.4494 3.6843 -1.2493 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8901 28 1 -0.3633 -1.0276 -0.0005 29 1 1.8934 -0.5138 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 5.7847 2.3248 -0.8895 32 1 5.7845 2.3255 0.8904 33 1 5.6974 4.8032 0.8902 34 1 7.1220 4.2141 0.0008 35 1 6.3742 6.7922 -0.4117 36 1 5.7790 9.1105 -5.2147 37 1 7.5034 9.3174 -5.6046 38 1 6.8945 7.7301 -5.0773 39 1 7.8988 11.2253 -3.6749 40 1 9.1054 11.0188 -0.2635 41 1 7.5006 12.4871 0.7241 42 1 7.5818 13.3849 -2.5934 43 1 9.3088 13.9260 -0.9676 44 1 7.2057 8.7945 -0.3862 45 1 3.6981 5.6303 -0.3594 46 1 3.6984 5.6307 -2.1390 47 1 2.3609 3.7414 -1.2499 48 1 3.7854 3.1522 -2.1393 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:28 Heat of formation + Delta-G solvation = -126.583139 kcal Electronic energy + Delta-G solvation = -29270.171726 eV Core-core repulsion = 25098.624705 eV Total energy + Delta-G solvation = -4171.547020 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.58776 -41.86603 -40.64479 -39.00246 -37.83478 -37.68586 -35.53669 -33.55597 -32.80632 -32.06210 -31.87723 -30.68656 -28.20077 -26.99939 -25.35474 -23.90606 -23.75195 -22.54005 -21.86686 -21.45058 -21.14100 -20.26496 -19.37486 -18.75454 -18.60558 -17.73244 -17.68308 -17.23326 -16.87649 -16.46268 -16.00241 -15.77645 -15.36160 -15.23362 -14.94771 -14.89153 -14.74349 -14.52533 -14.33392 -14.05626 -13.96827 -13.80058 -13.58556 -13.50674 -13.30777 -13.29102 -13.12318 -12.96848 -12.78446 -12.55014 -12.49242 -12.40309 -12.23523 -12.00031 -11.65948 -11.56533 -11.49881 -11.38764 -11.05750 -10.62559 -10.22957 -9.81573 -9.16874 -4.83888 0.30795 1.06801 1.21589 1.53890 1.60113 1.65514 1.94628 2.01909 2.20315 2.26806 3.24485 3.42770 3.50910 3.59512 3.78718 3.82836 3.88608 3.94893 4.01069 4.03999 4.12245 4.15181 4.18760 4.25386 4.29257 4.29711 4.38628 4.43292 4.56693 4.71759 4.72548 4.80036 4.82071 4.86575 4.88836 4.91432 4.99894 5.05031 5.06106 5.12337 5.16077 5.21000 5.22402 5.34753 5.40507 5.44288 5.65207 5.85686 6.32265 6.48698 6.54454 6.63099 7.08975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.464 3.536 5 O -0.540 6.540 6 C -0.074 4.074 7 H 0.136 0.864 8 C -0.098 4.098 9 C -0.114 4.114 10 C 0.144 3.856 11 H 0.070 0.930 12 N -0.714 5.714 13 C 0.589 3.411 14 O -0.560 6.560 15 C -0.070 4.070 16 C -0.087 4.087 17 C -0.090 4.090 18 C -0.211 4.211 19 C 0.073 3.927 20 C -0.064 4.064 21 O -0.561 6.561 22 Si 0.784 3.216 23 N -0.513 5.513 24 C -0.120 4.120 25 C -0.102 4.102 26 H 0.070 0.930 27 H 0.067 0.933 28 H 0.096 0.904 29 H 0.065 0.935 30 H 0.069 0.931 31 H 0.060 0.940 32 H 0.080 0.920 33 H 0.097 0.903 34 H 0.084 0.916 35 H 0.409 0.591 36 H 0.063 0.937 37 H 0.082 0.918 38 H 0.063 0.937 39 H 0.164 0.836 40 H 0.108 0.892 41 H 0.401 0.599 42 H -0.302 1.302 43 H -0.279 1.279 44 H 0.428 0.572 45 H 0.087 0.913 46 H 0.056 0.944 47 H 0.086 0.914 48 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.221 3.414 5.421 6.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.308 3.692 5 O -0.430 6.430 6 C -0.093 4.093 7 H 0.154 0.846 8 C -0.136 4.136 9 C -0.151 4.151 10 C 0.040 3.960 11 H 0.088 0.912 12 N -0.365 5.365 13 C 0.378 3.622 14 O -0.439 6.439 15 C -0.183 4.183 16 C -0.096 4.096 17 C -0.147 4.147 18 C -0.235 4.235 19 C -0.046 4.046 20 C -0.172 4.172 21 O -0.371 6.371 22 Si 0.688 3.312 23 N -0.110 5.110 24 C -0.159 4.159 25 C -0.140 4.140 26 H 0.089 0.911 27 H 0.086 0.914 28 H 0.114 0.886 29 H 0.083 0.917 30 H 0.087 0.913 31 H 0.078 0.922 32 H 0.099 0.901 33 H 0.115 0.885 34 H 0.103 0.897 35 H 0.245 0.755 36 H 0.082 0.918 37 H 0.101 0.899 38 H 0.082 0.918 39 H 0.181 0.819 40 H 0.125 0.875 41 H 0.253 0.747 42 H -0.229 1.229 43 H -0.205 1.205 44 H 0.268 0.732 45 H 0.106 0.894 46 H 0.074 0.926 47 H 0.105 0.895 48 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 1.704 2.986 4.380 5.569 hybrid contribution -0.510 -0.128 1.685 1.765 sum 1.194 2.859 6.065 6.810 Atomic orbital electron populations 1.21825 0.90690 1.04256 1.03738 1.23241 0.96928 0.79431 1.02409 1.86517 1.24336 1.33393 1.83464 1.24321 0.80541 0.93321 0.71000 1.90671 1.61112 1.44464 1.46747 1.21254 0.96645 0.88281 1.03140 0.84610 1.21353 0.91450 0.97154 1.03667 1.21746 1.01818 0.94428 0.97144 1.21053 0.93274 0.81690 0.99955 0.91203 1.45800 1.65045 1.17192 1.08441 1.17158 0.77337 0.83587 0.84124 1.90822 1.52293 1.68395 1.32381 1.20155 1.15447 0.94898 0.87797 1.20151 1.00557 0.93723 0.95123 1.20334 1.01729 1.02164 0.90438 1.20770 1.09684 0.99777 0.93253 1.20150 1.03469 0.86942 0.94016 1.24709 0.93234 1.02800 0.96474 1.86518 1.40487 1.60595 1.49548 0.93453 0.83255 0.73647 0.80869 1.41762 1.47925 1.12636 1.08710 1.21842 0.94510 0.96351 1.03183 1.21417 1.01945 0.95062 0.95573 0.91121 0.91361 0.88583 0.91661 0.91304 0.92162 0.90109 0.88477 0.89719 0.75515 0.91839 0.89933 0.91818 0.81875 0.87451 0.74725 1.22893 1.20526 0.73207 0.89423 0.92568 0.89525 0.92278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.42 10.29 71.98 0.74 1.16 16 2 C 0.05 0.10 6.19 71.98 0.45 0.54 16 3 O -0.36 -1.49 10.12 -51.41 -0.52 -2.01 16 4 C 0.46 2.29 7.26 71.24 0.52 2.81 16 5 O -0.54 -6.14 15.73 21.95 0.35 -5.79 16 6 C -0.07 0.13 2.63 -11.54 -0.03 0.10 16 7 H 0.14 -0.89 8.14 -2.39 -0.02 -0.91 16 8 C -0.10 0.20 4.49 30.60 0.14 0.34 16 9 C -0.11 0.69 5.39 30.60 0.16 0.86 16 10 C 0.14 -0.19 2.45 44.99 0.11 -0.08 16 11 H 0.07 0.30 7.58 -2.39 -0.02 0.28 16 12 N -0.71 1.15 5.07 -446.50 -2.26 -1.12 16 13 C 0.59 3.60 7.75 86.45 0.67 4.27 16 14 O -0.56 -7.65 14.47 -4.34 -0.06 -7.72 16 15 C -0.07 -0.33 7.06 40.35 0.28 -0.05 16 16 C -0.09 -0.54 6.21 -19.57 -0.12 -0.66 16 17 C -0.09 -0.53 9.83 71.23 0.70 0.17 16 18 C -0.21 -0.53 9.27 22.01 0.20 -0.32 16 19 C 0.07 0.01 6.51 41.34 0.27 0.28 16 20 C -0.06 0.31 3.07 71.23 0.22 0.52 16 21 O -0.56 1.58 12.86 -148.98 -1.92 -0.34 16 22 Si 0.78 -3.69 30.54 68.60 2.10 -1.59 16 23 N -0.51 0.44 5.99 -171.93 -1.03 -0.60 16 24 C -0.12 0.18 5.49 30.59 0.17 0.35 16 25 C -0.10 0.13 5.14 30.59 0.16 0.28 16 26 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 27 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 28 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 29 H 0.06 0.18 8.13 -2.39 -0.02 0.16 16 30 H 0.07 0.14 8.13 -2.39 -0.02 0.12 16 31 H 0.06 0.11 8.10 -2.39 -0.02 0.09 16 32 H 0.08 -0.13 8.10 -2.39 -0.02 -0.15 16 33 H 0.10 -1.01 8.14 -2.39 -0.02 -1.03 16 34 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 35 H 0.41 -3.25 7.73 -92.71 -0.72 -3.97 16 36 H 0.06 0.40 8.14 -2.39 -0.02 0.38 16 37 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 38 H 0.06 0.61 6.49 -2.38 -0.02 0.60 16 39 H 0.16 -0.23 6.17 -2.91 -0.02 -0.25 16 40 H 0.11 -1.09 7.96 -2.38 -0.02 -1.11 16 41 H 0.40 -4.32 8.74 -74.06 -0.65 -4.96 16 42 H -0.30 -1.21 7.11 99.48 0.71 -0.50 16 43 H -0.28 0.40 7.11 99.48 0.71 1.10 16 44 H 0.43 -2.93 8.19 -92.71 -0.76 -3.69 16 45 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 46 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 47 H 0.09 -0.15 8.11 -2.39 -0.02 -0.17 16 48 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 Total: 0.00 -24.43 391.02 0.19 -24.24 By element: Atomic # 1 Polarization: -14.57 SS G_CDS: -1.09 Total: -15.66 kcal Atomic # 6 Polarization: 5.95 SS G_CDS: 4.64 Total: 10.58 kcal Atomic # 7 Polarization: 1.58 SS G_CDS: -3.30 Total: -1.71 kcal Atomic # 8 Polarization: -13.70 SS G_CDS: -2.15 Total: -15.85 kcal Atomic # 14 Polarization: -3.69 SS G_CDS: 2.10 Total: -1.59 kcal Total: -24.43 0.19 -24.24 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.341 kcal (2) G-P(sol) polarization free energy of solvation -24.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.242 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.583 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds