Wall clock time and date at job start Sun Mar 7 2021 02:30:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45201 * 109.46884 * 2 1 4 4 C 1.34222 * 117.00137 * 179.97438 * 3 2 1 5 5 O 1.20833 * 119.99852 * 0.02562 * 4 3 2 6 6 C 1.50696 * 120.00432 * 179.71953 * 4 3 2 7 7 H 1.09000 * 109.47190 * 300.28287 * 6 4 3 8 8 C 1.53010 * 109.46632 * 60.27590 * 6 4 3 9 9 C 1.53000 * 109.46731 * 179.97438 * 8 6 4 10 10 C 1.52996 * 109.47274 * 300.00204 * 9 8 6 11 11 H 1.09002 * 109.47033 * 299.99632 * 10 9 8 12 12 N 1.46507 * 109.47155 * 180.02562 * 10 9 8 13 13 C 1.34770 * 120.00510 * 84.99699 * 12 10 9 14 14 O 1.21290 * 119.99706 * 0.02562 * 13 12 10 15 15 C 1.50700 * 120.00245 * 180.02562 * 13 12 10 16 16 C 1.53541 * 109.82082 * 80.86291 * 15 13 12 17 17 C 1.53039 * 108.56234 * 180.48637 * 16 15 13 18 18 C 1.50205 * 110.31673 * 310.43345 * 17 16 15 19 19 C 1.50702 * 118.54477 * 200.02515 * 18 17 16 20 20 O 1.42895 * 109.47066 * 69.99742 * 19 18 17 21 21 Si 1.86292 * 109.47253 * 189.99815 * 19 18 17 22 22 C 1.31111 * 122.90665 * 20.04880 * 18 17 16 23 23 N 1.38963 * 121.87356 * 359.65980 * 22 18 17 24 24 C 1.52996 * 109.47334 * 60.00276 * 10 9 8 25 25 C 1.52996 * 109.47298 * 180.27351 * 6 4 3 26 26 H 1.08997 * 109.47194 * 60.00322 * 1 2 3 27 27 H 1.08999 * 109.47003 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.47361 * 299.99753 * 1 2 3 29 29 H 1.08997 * 109.46911 * 239.99959 * 2 1 3 30 30 H 1.08997 * 109.46745 * 119.99968 * 2 1 3 31 31 H 1.08990 * 109.47121 * 300.00016 * 8 6 4 32 32 H 1.09000 * 109.46764 * 60.00436 * 8 6 4 33 33 H 1.09006 * 109.46567 * 180.02562 * 9 8 6 34 34 H 1.09000 * 109.47116 * 60.00682 * 9 8 6 35 35 H 0.97003 * 119.99310 * 265.00194 * 12 10 9 36 36 H 1.09000 * 109.81180 * 320.00140 * 15 13 12 37 37 H 1.09002 * 109.62465 * 300.21475 * 16 15 13 38 38 H 1.09005 * 109.62290 * 60.77042 * 16 15 13 39 39 H 1.09005 * 109.32429 * 70.68961 * 17 16 15 40 40 H 1.08996 * 109.33036 * 190.16563 * 17 16 15 41 41 H 1.09002 * 109.47122 * 309.99885 * 19 18 17 42 42 H 0.96705 * 114.00223 * 59.99656 * 20 19 18 43 43 H 1.48507 * 109.99987 * 58.68171 * 21 19 18 44 44 H 1.48500 * 110.00167 * 180.02562 * 21 19 18 45 45 H 1.08003 * 119.07305 * 179.57434 * 22 18 17 46 46 H 0.96998 * 120.58643 * 193.28631 * 23 22 18 47 47 H 1.09004 * 109.47074 * 180.02562 * 24 10 9 48 48 H 1.09000 * 109.46855 * 59.99645 * 24 10 9 49 49 H 1.08994 * 109.47515 * 300.00215 * 25 6 4 50 50 H 1.09006 * 109.46938 * 60.00806 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9375 -0.0058 7 1 3.5816 3.4668 -0.8963 8 6 3.4532 3.6883 1.2428 9 6 4.0386 5.1019 1.2367 10 6 5.5664 5.0213 1.2320 11 1 5.9050 4.4917 2.1226 12 7 6.1269 6.3749 1.2268 13 6 6.2943 7.0395 2.3872 14 8 5.9815 6.5168 3.4360 15 6 6.8703 8.4321 2.3817 16 6 5.7737 9.4476 2.0300 17 6 6.3913 10.8478 2.0206 18 6 7.1814 11.0778 3.2772 19 6 7.4828 12.4958 3.6890 20 8 6.2781 13.1334 4.1180 21 14 8.7133 12.4881 5.0877 22 6 7.6209 10.0994 4.0313 23 7 7.3774 8.7671 3.7205 24 6 6.0337 4.2705 -0.0165 25 6 5.4485 2.8574 -0.0107 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 2.3648 3.7453 1.2462 32 1 3.7923 3.1589 2.1332 33 1 3.7059 5.6366 2.1264 34 1 3.6999 5.6315 0.3462 35 1 6.3773 6.7928 0.3880 36 1 7.6791 8.4945 1.6537 37 1 5.3667 9.2204 1.0447 38 1 4.9802 9.4027 2.7760 39 1 7.0497 10.9459 1.1574 40 1 5.5977 11.5918 1.9521 41 1 7.8997 13.0395 2.8413 42 1 5.8513 12.7021 4.8710 43 1 9.9590 11.7994 4.6644 44 1 9.0184 13.8806 5.5035 45 1 8.1894 10.3355 4.9188 46 1 7.5379 8.0701 4.3757 47 1 7.1222 4.2127 -0.0195 48 1 5.6951 4.8002 -0.9069 49 1 5.7875 2.3281 0.8798 50 1 5.7815 2.3225 -0.9002 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_15413834.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:37 Heat of formation + Delta-G solvation = -149.229414 kcal Electronic energy + Delta-G solvation = -29852.455349 eV Core-core repulsion = 25652.614834 eV Total energy + Delta-G solvation = -4199.840515 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.192 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.86805 -41.39197 -39.94839 -38.92138 -37.57841 -37.26613 -35.44974 -33.24761 -33.18430 -32.72691 -31.98210 -30.93830 -27.56849 -25.67881 -25.21175 -24.03235 -23.86562 -23.43186 -22.05200 -21.64545 -20.95372 -19.39043 -19.15889 -18.65630 -18.03376 -17.68615 -17.56311 -17.32426 -16.80369 -16.38995 -15.92860 -15.82751 -15.67091 -15.39609 -15.26560 -15.03979 -14.94274 -14.55471 -14.51903 -14.25030 -14.06573 -13.91365 -13.83455 -13.59454 -13.38726 -13.13874 -12.96486 -12.91533 -12.83178 -12.55912 -12.47627 -12.35183 -12.09996 -11.97956 -11.77317 -11.74392 -11.53094 -11.50302 -11.33408 -11.27641 -10.81156 -10.21425 -10.14847 -8.48614 -4.97680 1.20524 1.32906 1.42174 1.45995 1.61929 1.68029 1.81820 2.06127 2.58076 3.35797 3.38183 3.47227 3.57586 3.67619 3.71093 3.78766 3.81290 3.92172 3.94370 3.97394 3.98236 4.06550 4.13433 4.19087 4.26702 4.27089 4.27989 4.33754 4.48519 4.54151 4.58743 4.62132 4.71088 4.73535 4.78782 4.80652 4.86427 4.95310 4.97279 4.99945 5.01767 5.09544 5.14092 5.15447 5.25435 5.33577 5.48301 5.54279 6.17855 6.35240 6.75667 6.75806 6.81520 7.04019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.112 0.888 8 C -0.108 4.108 9 C -0.127 4.127 10 C 0.142 3.858 11 H 0.092 0.908 12 N -0.723 5.723 13 C 0.514 3.486 14 O -0.528 6.528 15 C 0.136 3.864 16 C -0.125 4.125 17 C -0.054 4.054 18 C -0.281 4.281 19 C -0.043 4.043 20 O -0.547 6.547 21 Si 0.667 3.333 22 C 0.145 3.855 23 N -0.732 5.732 24 C -0.125 4.125 25 C -0.101 4.101 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.067 0.933 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.083 0.917 32 H 0.072 0.928 33 H 0.076 0.924 34 H 0.070 0.930 35 H 0.403 0.597 36 H 0.089 0.911 37 H 0.078 0.922 38 H 0.077 0.923 39 H 0.063 0.937 40 H 0.079 0.921 41 H 0.103 0.897 42 H 0.376 0.624 43 H -0.261 1.261 44 H -0.258 1.258 45 H 0.133 0.867 46 H 0.410 0.590 47 H 0.078 0.922 48 H 0.074 0.926 49 H 0.077 0.923 50 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.727 -0.744 -2.286 2.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.146 4.146 9 C -0.166 4.166 10 C 0.038 3.962 11 H 0.110 0.890 12 N -0.374 5.374 13 C 0.299 3.701 14 O -0.404 6.404 15 C 0.026 3.974 16 C -0.163 4.163 17 C -0.091 4.091 18 C -0.291 4.291 19 C -0.155 4.155 20 O -0.352 6.352 21 Si 0.570 3.430 22 C 0.024 3.976 23 N -0.365 5.365 24 C -0.163 4.163 25 C -0.139 4.139 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.086 0.914 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.101 0.899 32 H 0.091 0.909 33 H 0.095 0.905 34 H 0.089 0.911 35 H 0.237 0.763 36 H 0.106 0.894 37 H 0.096 0.904 38 H 0.096 0.904 39 H 0.082 0.918 40 H 0.098 0.902 41 H 0.121 0.879 42 H 0.223 0.777 43 H -0.186 1.186 44 H -0.183 1.183 45 H 0.150 0.850 46 H 0.247 0.753 47 H 0.097 0.903 48 H 0.092 0.908 49 H 0.096 0.904 50 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -0.833 -0.818 -1.854 2.191 hybrid contribution 0.154 -0.282 -0.859 0.917 sum -0.679 -1.101 -2.712 3.005 Atomic orbital electron populations 1.21821 0.92323 1.03267 1.03653 1.23080 0.95604 0.79869 1.02731 1.86502 1.24415 1.32728 1.83761 1.23728 0.80700 0.92602 0.72211 1.90692 1.60465 1.43162 1.45006 1.21173 0.96678 0.89852 1.02270 0.87057 1.21493 1.01820 0.95227 0.96088 1.21918 0.94659 0.96630 1.03361 1.21090 0.93233 0.82056 0.99851 0.88988 1.46013 1.65257 1.17067 1.09095 1.20605 0.78215 0.87290 0.84003 1.90743 1.49779 1.68720 1.31113 1.21001 0.97320 0.91592 0.87459 1.21854 0.97064 0.94855 1.02558 1.19951 0.98618 0.95487 0.95070 1.20943 1.10676 0.94322 1.03181 1.24666 0.94072 0.91792 1.04966 1.86471 1.39623 1.55375 1.53688 0.95250 0.79668 0.82670 0.85419 1.20310 0.96046 0.83622 0.97587 1.44275 1.72641 1.05765 1.13858 1.21808 1.01576 0.95540 0.97402 1.21382 0.91573 0.96438 1.04512 0.91374 0.90017 0.91352 0.91128 0.91111 0.89870 0.90928 0.90550 0.91086 0.76294 0.89350 0.90370 0.90397 0.91848 0.90219 0.87917 0.77721 1.18592 1.18277 0.85027 0.75349 0.90311 0.90766 0.90417 0.90123 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.49 10.13 -39.24 -0.40 -0.89 16 4 C 0.46 0.76 7.25 36.00 0.26 1.02 16 5 O -0.51 -2.33 15.73 -18.76 -0.30 -2.62 16 6 C -0.08 0.12 2.63 -91.77 -0.24 -0.12 16 7 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 8 C -0.11 0.18 5.14 -26.73 -0.14 0.04 16 9 C -0.13 0.26 5.49 -26.73 -0.15 0.11 16 10 C 0.14 -0.29 2.45 -67.93 -0.17 -0.46 16 11 H 0.09 0.01 7.58 -51.93 -0.39 -0.38 16 12 N -0.72 1.98 5.08 -53.80 -0.27 1.71 16 13 C 0.51 -0.12 7.05 -10.99 -0.08 -0.20 16 14 O -0.53 -1.87 15.74 5.55 0.09 -1.78 16 15 C 0.14 -0.19 3.36 -68.51 -0.23 -0.42 16 16 C -0.12 0.20 5.47 -26.43 -0.14 0.06 16 17 C -0.05 0.04 5.85 -28.10 -0.16 -0.13 16 18 C -0.28 0.06 5.37 -101.33 -0.54 -0.48 16 19 C -0.04 -0.01 2.81 36.01 0.10 0.09 16 20 O -0.55 -0.51 12.88 -35.23 -0.45 -0.96 16 21 Si 0.67 -0.34 29.72 -169.99 -5.05 -5.39 16 22 C 0.14 -0.11 9.62 -16.06 -0.15 -0.26 16 23 N -0.73 0.34 5.47 -55.33 -0.30 0.04 16 24 C -0.13 0.43 5.39 -26.76 -0.14 0.29 16 25 C -0.10 0.17 4.49 -26.76 -0.12 0.05 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.07 0.02 8.13 -51.93 -0.42 -0.41 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.08 -0.14 8.12 -51.93 -0.42 -0.56 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 34 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 35 H 0.40 -2.13 8.60 -40.82 -0.35 -2.48 16 36 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 38 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 41 H 0.10 0.09 7.96 -51.93 -0.41 -0.32 16 42 H 0.38 -1.02 8.70 45.56 0.40 -0.63 16 43 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 44 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 45 H 0.13 -0.33 4.48 -52.48 -0.24 -0.56 16 46 H 0.41 -0.13 8.10 -40.82 -0.33 -0.46 16 47 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 48 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 49 H 0.08 -0.03 8.10 -51.93 -0.42 -0.45 16 50 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 LS Contribution 397.83 15.07 6.00 6.00 Total: 0.00 -8.71 397.83 -10.54 -19.25 By element: Atomic # 1 Polarization: -7.27 SS G_CDS: -8.55 Total: -15.82 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -1.30 Total: 0.47 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -0.58 Total: 1.74 kcal Atomic # 8 Polarization: -5.19 SS G_CDS: -1.06 Total: -6.25 kcal Atomic # 14 Polarization: -0.34 SS G_CDS: -5.05 Total: -5.39 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -8.71 -10.54 -19.25 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_15413834.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.978 kcal (2) G-P(sol) polarization free energy of solvation -8.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.689 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds