Wall clock time and date at job start Sun Mar 7 2021 02:30:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45194 * 109.47339 * 2 1 4 4 C 1.34235 * 117.00385 * 179.97438 * 3 2 1 5 5 O 1.20824 * 119.99671 * 0.02562 * 4 3 2 6 6 C 1.50693 * 120.00281 * 180.02562 * 4 3 2 7 7 H 1.09000 * 109.47089 * 60.00096 * 6 4 3 8 8 C 1.53003 * 109.47172 * 180.02562 * 6 4 3 9 9 C 1.53003 * 109.47203 * 180.02562 * 8 6 4 10 10 C 1.53000 * 109.46720 * 299.99834 * 9 8 6 11 11 H 1.09000 * 109.47115 * 300.00085 * 10 9 8 12 12 N 1.46503 * 109.47291 * 180.02562 * 10 9 8 13 13 C 1.34769 * 119.99878 * 154.99668 * 12 10 9 14 14 O 1.21282 * 120.00395 * 0.02562 * 13 12 10 15 15 C 1.50710 * 119.99759 * 179.97438 * 13 12 10 16 16 C 1.53039 * 109.33068 * 180.86319 * 15 13 12 17 17 C 1.53532 * 108.57159 * 190.18885 * 16 15 13 18 18 N 1.47023 * 107.65101 * 60.95055 * 17 16 15 19 19 C 1.38928 * 118.88597 * 316.31931 * 18 17 16 20 20 C 1.31115 * 121.84753 * 13.33653 * 19 18 17 21 21 C 1.50700 * 118.54603 * 179.57687 * 20 19 18 22 22 O 1.42900 * 109.46774 * 250.02095 * 21 20 19 23 23 Si 1.86299 * 109.47167 * 10.02060 * 21 20 19 24 24 C 1.52998 * 109.47209 * 59.99795 * 10 9 8 25 25 C 1.52999 * 109.47707 * 299.99984 * 24 10 9 26 26 H 1.09002 * 109.47153 * 59.99705 * 1 2 3 27 27 H 1.09001 * 109.46832 * 299.99896 * 1 2 3 28 28 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47153 * 120.00295 * 2 1 3 30 30 H 1.08998 * 109.47533 * 239.99925 * 2 1 3 31 31 H 1.09003 * 109.46860 * 300.00215 * 8 6 4 32 32 H 1.09000 * 109.47151 * 59.99992 * 8 6 4 33 33 H 1.09000 * 109.47397 * 59.99747 * 9 8 6 34 34 H 1.08994 * 109.47204 * 180.02562 * 9 8 6 35 35 H 0.96998 * 119.99446 * 335.00482 * 12 10 9 36 36 H 1.08999 * 109.32959 * 300.35377 * 15 13 12 37 37 H 1.08998 * 109.62014 * 309.89369 * 16 15 13 38 38 H 1.09000 * 109.61705 * 70.45094 * 16 15 13 39 39 H 1.09004 * 109.83876 * 301.40184 * 17 16 15 40 40 H 1.08998 * 109.80701 * 180.48367 * 17 16 15 41 41 H 0.96999 * 120.55833 * 136.29795 * 18 17 16 42 42 H 1.07997 * 119.07419 * 193.32133 * 19 18 17 43 43 H 1.09001 * 109.47274 * 130.01919 * 21 20 19 44 44 H 0.96701 * 114.00134 * 60.00258 * 22 21 20 45 45 H 1.48495 * 110.00415 * 58.68088 * 23 21 20 46 46 H 1.48499 * 109.99970 * 180.02562 * 23 21 20 47 47 H 1.08997 * 109.47102 * 60.00571 * 24 10 9 48 48 H 1.09003 * 109.46921 * 179.97438 * 24 10 9 49 49 H 1.09000 * 109.47083 * 299.99995 * 25 24 10 50 50 H 1.08998 * 109.47227 * 179.97438 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9373 0.0012 7 1 3.5845 3.4692 0.8912 8 6 5.4487 2.8572 0.0010 9 6 6.0336 4.2711 0.0023 10 6 5.5620 5.0191 -1.2463 11 1 5.8979 4.4877 -2.1367 12 7 6.1224 6.3727 -1.2455 13 6 6.2859 7.0349 -2.4078 14 8 5.9688 6.5106 -3.4544 15 6 6.8619 8.4276 -2.4069 16 6 6.9192 8.9530 -3.8431 17 6 7.7355 10.2533 -3.8559 18 7 9.0904 9.9337 -3.3829 19 6 9.2374 9.1028 -2.2793 20 6 8.2390 8.3955 -1.8079 21 6 8.4841 7.5111 -0.6126 22 8 8.4344 6.1410 -1.0157 23 14 10.1620 7.8870 0.1044 24 6 4.0341 5.0991 -1.2462 25 6 3.4492 3.6853 -1.2474 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8933 -0.5139 0.8900 30 1 1.8934 -0.5138 -0.8899 31 1 5.7847 2.3246 0.8908 32 1 5.7846 2.3255 -0.8892 33 1 5.6977 4.8025 0.8928 34 1 7.1220 4.2140 0.0018 35 1 6.3758 6.7921 -0.4084 36 1 6.2246 9.0812 -1.8114 37 1 7.3990 8.2137 -4.4844 38 1 5.9089 9.1514 -4.2009 39 1 7.2754 10.9855 -3.1924 40 1 7.7820 10.6502 -4.8700 41 1 9.8687 10.2967 -3.8340 42 1 10.2011 9.0373 -1.7962 43 1 7.7176 7.6965 0.1398 44 1 9.0905 5.9040 -1.6854 45 1 10.2374 9.3168 0.4982 46 1 10.4160 7.0209 1.2836 47 1 3.6981 5.6305 -0.3559 48 1 3.6982 5.6324 -2.1356 49 1 3.7851 3.1539 -2.1379 50 1 2.3607 3.7424 -1.2469 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_15608500.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:41 Heat of formation + Delta-G solvation = -129.917918 kcal Electronic energy + Delta-G solvation = -31294.252036 eV Core-core repulsion = 27095.248930 eV Total energy + Delta-G solvation = -4199.003106 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.192 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.90132 -41.41801 -39.67992 -38.65086 -37.70120 -37.45001 -35.04667 -33.46155 -32.72515 -32.61752 -31.79411 -30.70009 -27.25639 -26.13155 -25.01575 -23.77508 -23.62052 -23.12103 -21.99772 -21.40359 -20.83461 -19.26885 -18.84520 -18.71791 -17.93377 -17.68114 -17.57886 -17.35566 -16.94160 -16.22186 -15.83232 -15.78321 -15.43708 -15.23270 -15.13309 -14.90745 -14.74008 -14.50230 -14.35431 -14.06557 -13.96194 -13.91218 -13.65198 -13.34416 -13.19899 -13.13005 -12.95542 -12.73767 -12.59623 -12.51783 -12.29375 -12.16900 -12.08635 -11.90672 -11.73402 -11.60339 -11.51000 -11.40522 -11.32161 -11.27354 -10.58963 -10.17818 -9.65187 -8.38676 -4.90831 1.07943 1.35689 1.45673 1.61849 1.70704 1.94023 2.07146 2.42157 2.71399 3.47137 3.59549 3.62894 3.69247 3.77615 3.90503 3.94244 4.00918 4.02287 4.06627 4.14444 4.19169 4.26610 4.29919 4.37025 4.39606 4.40002 4.44377 4.45191 4.59599 4.67916 4.70954 4.79252 4.83447 4.83842 4.87205 4.89134 5.00165 5.05966 5.09597 5.11475 5.17248 5.26816 5.31553 5.37426 5.37598 5.43325 5.51342 5.75345 6.36467 6.64339 6.78909 6.90442 7.01727 7.50372 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.464 3.536 5 O -0.540 6.540 6 C -0.074 4.074 7 H 0.133 0.867 8 C -0.097 4.097 9 C -0.108 4.108 10 C 0.154 3.846 11 H 0.058 0.942 12 N -0.687 5.687 13 C 0.533 3.467 14 O -0.595 6.595 15 C -0.038 4.038 16 C -0.116 4.116 17 C 0.122 3.878 18 N -0.748 5.748 19 C 0.161 3.839 20 C -0.299 4.299 21 C -0.048 4.048 22 O -0.546 6.546 23 Si 0.754 3.246 24 C -0.121 4.121 25 C -0.100 4.100 26 H 0.068 0.932 27 H 0.070 0.930 28 H 0.096 0.904 29 H 0.068 0.932 30 H 0.065 0.935 31 H 0.074 0.926 32 H 0.057 0.943 33 H 0.083 0.917 34 H 0.085 0.915 35 H 0.406 0.594 36 H 0.098 0.902 37 H 0.057 0.943 38 H 0.071 0.929 39 H 0.066 0.934 40 H 0.096 0.904 41 H 0.413 0.587 42 H 0.151 0.849 43 H 0.106 0.894 44 H 0.382 0.618 45 H -0.293 1.293 46 H -0.306 1.306 47 H 0.084 0.916 48 H 0.054 0.946 49 H 0.056 0.944 50 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.702 5.670 1.263 6.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.277 6.277 4 C 0.309 3.691 5 O -0.430 6.430 6 C -0.093 4.093 7 H 0.151 0.849 8 C -0.135 4.135 9 C -0.146 4.146 10 C 0.049 3.951 11 H 0.077 0.923 12 N -0.338 5.338 13 C 0.320 3.680 14 O -0.477 6.477 15 C -0.060 4.060 16 C -0.155 4.155 17 C -0.003 4.003 18 N -0.378 5.378 19 C 0.038 3.962 20 C -0.310 4.310 21 C -0.160 4.160 22 O -0.352 6.352 23 Si 0.662 3.338 24 C -0.160 4.160 25 C -0.138 4.138 26 H 0.087 0.913 27 H 0.089 0.911 28 H 0.114 0.886 29 H 0.086 0.914 30 H 0.083 0.917 31 H 0.093 0.907 32 H 0.076 0.924 33 H 0.102 0.898 34 H 0.104 0.896 35 H 0.245 0.755 36 H 0.116 0.884 37 H 0.076 0.924 38 H 0.090 0.910 39 H 0.084 0.916 40 H 0.114 0.886 41 H 0.250 0.750 42 H 0.168 0.832 43 H 0.123 0.877 44 H 0.231 0.769 45 H -0.220 1.220 46 H -0.235 1.235 47 H 0.102 0.898 48 H 0.073 0.927 49 H 0.074 0.926 50 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.496 5.288 1.626 5.731 hybrid contribution -0.226 -0.119 0.163 0.303 sum 1.270 5.169 1.790 5.616 Atomic orbital electron populations 1.21822 0.90619 1.04262 1.03750 1.23245 0.96974 0.79452 1.02386 1.86517 1.24291 1.33393 1.83486 1.24325 0.80538 0.93304 0.70968 1.90663 1.61134 1.44445 1.46764 1.21250 0.96678 0.88264 1.03089 0.84907 1.21356 0.91409 0.97557 1.03162 1.21663 1.01995 0.93818 0.97124 1.20753 0.92176 0.83295 0.98878 0.92338 1.45933 1.62907 1.15911 1.09064 1.20636 0.76192 0.87980 0.83164 1.90668 1.53362 1.70457 1.33170 1.19686 0.95472 0.92861 0.97944 1.21638 1.01025 0.97848 0.95010 1.21648 0.82569 0.95273 1.00780 1.44669 1.08069 1.53221 1.31825 1.20591 0.97657 0.89797 0.88112 1.20548 0.95419 1.09120 1.05888 1.24699 1.10259 0.83784 0.97221 1.86586 1.61549 1.24000 1.63062 0.93994 0.80925 0.76285 0.82548 1.21872 0.95320 0.96029 1.02781 1.21404 1.01767 0.95309 0.95356 0.91327 0.91120 0.88556 0.91354 0.91673 0.90712 0.92397 0.89819 0.89609 0.75504 0.88414 0.92413 0.91005 0.91624 0.88556 0.75036 0.83232 0.87724 0.76895 1.22015 1.23465 0.89766 0.92701 0.92554 0.89609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.31 10.29 71.98 0.74 1.05 16 2 C 0.05 0.16 6.19 71.98 0.45 0.60 16 3 O -0.36 -2.00 10.12 -51.47 -0.52 -2.52 16 4 C 0.46 3.19 7.26 71.23 0.52 3.71 16 5 O -0.54 -7.15 15.73 21.97 0.35 -6.81 16 6 C -0.07 -0.06 2.63 -11.54 -0.03 -0.09 16 7 H 0.13 -0.49 8.14 -2.39 -0.02 -0.51 16 8 C -0.10 -0.13 4.49 30.60 0.14 0.00 16 9 C -0.11 0.18 5.37 30.60 0.16 0.34 16 10 C 0.15 0.26 2.41 44.99 0.11 0.37 16 11 H 0.06 0.46 7.58 -2.39 -0.02 0.45 16 12 N -0.69 -0.31 2.74 -442.53 -1.21 -1.53 16 13 C 0.53 2.69 6.32 87.66 0.55 3.25 16 14 O -0.60 -8.39 15.46 -3.04 -0.05 -8.43 16 15 C -0.04 0.00 2.74 -12.42 -0.03 -0.04 16 16 C -0.12 -0.07 4.91 30.79 0.15 0.08 16 17 C 0.12 -0.58 7.16 86.46 0.62 0.04 16 18 N -0.75 4.46 5.83 -345.93 -2.02 2.45 16 19 C 0.16 -0.87 9.62 83.41 0.80 -0.07 16 20 C -0.30 0.99 5.14 -16.76 -0.09 0.91 16 21 C -0.05 0.24 1.74 71.24 0.12 0.36 16 22 O -0.55 1.97 8.72 -148.98 -1.30 0.67 16 23 Si 0.75 -3.74 29.72 68.60 2.04 -1.70 16 24 C -0.12 -0.09 5.50 30.59 0.17 0.07 16 25 C -0.10 -0.10 5.14 30.59 0.16 0.06 16 26 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 27 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 28 H 0.10 -0.49 8.14 -2.38 -0.02 -0.51 16 29 H 0.07 0.21 8.13 -2.39 -0.02 0.19 16 30 H 0.06 0.25 8.13 -2.39 -0.02 0.23 16 31 H 0.07 0.15 8.10 -2.39 -0.02 0.13 16 32 H 0.06 0.30 8.10 -2.39 -0.02 0.28 16 33 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 34 H 0.09 -0.06 7.40 -2.39 -0.02 -0.07 16 35 H 0.41 -1.28 5.55 -92.71 -0.51 -1.79 16 36 H 0.10 -0.19 8.14 -2.39 -0.02 -0.21 16 37 H 0.06 0.33 7.75 -2.39 -0.02 0.31 16 38 H 0.07 0.12 8.14 -2.39 -0.02 0.10 16 39 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 40 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 41 H 0.41 -4.08 8.96 -92.71 -0.83 -4.92 16 42 H 0.15 -1.47 4.48 -2.91 -0.01 -1.49 16 43 H 0.11 -0.62 6.39 -2.39 -0.02 -0.63 16 44 H 0.38 -2.77 8.70 -74.06 -0.64 -3.42 16 45 H -0.29 -0.12 7.11 99.48 0.71 0.58 16 46 H -0.31 -1.08 7.11 99.48 0.71 -0.37 16 47 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 48 H 0.05 0.29 8.14 -2.39 -0.02 0.27 16 49 H 0.06 0.23 8.14 -2.39 -0.02 0.22 16 50 H 0.09 0.00 8.11 -2.39 -0.02 -0.02 16 Total: 0.00 -21.35 384.54 0.84 -20.52 By element: Atomic # 1 Polarization: -12.30 SS G_CDS: -0.99 Total: -13.29 kcal Atomic # 6 Polarization: 6.10 SS G_CDS: 4.54 Total: 10.64 kcal Atomic # 7 Polarization: 4.15 SS G_CDS: -3.23 Total: 0.92 kcal Atomic # 8 Polarization: -15.57 SS G_CDS: -1.52 Total: -17.09 kcal Atomic # 14 Polarization: -3.74 SS G_CDS: 2.04 Total: -1.70 kcal Total: -21.35 0.84 -20.52 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_15608500.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.402 kcal (2) G-P(sol) polarization free energy of solvation -21.353 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.837 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.515 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds