Wall clock time and date at job start Sun Mar 7 2021 02:30:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45192 * 109.47109 * 2 1 4 4 C 1.34230 * 117.00018 * 179.97438 * 3 2 1 5 5 O 1.20826 * 120.00015 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00046 * 179.97438 * 4 3 2 7 7 H 1.09002 * 109.46793 * 60.00715 * 6 4 3 8 8 C 1.53002 * 109.46958 * 180.02562 * 6 4 3 9 9 C 1.52997 * 109.46978 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.47415 * 300.00098 * 9 8 6 11 11 H 1.09002 * 109.47070 * 300.00053 * 10 9 8 12 12 N 1.46505 * 109.47411 * 179.97438 * 10 9 8 13 13 C 1.34769 * 119.99798 * 155.00053 * 12 10 9 14 14 O 1.21280 * 120.00742 * 0.02562 * 13 12 10 15 15 C 1.50705 * 119.99510 * 179.97438 * 13 12 10 16 16 O 1.42904 * 109.47077 * 180.02562 * 15 13 12 17 17 C 1.35896 * 117.00192 * 180.02562 * 16 15 13 18 18 C 1.38711 * 120.05705 * 179.72611 * 17 16 15 19 19 C 1.50704 * 120.02764 * 0.02562 * 18 17 16 20 20 O 1.42893 * 109.47367 * 74.99726 * 19 18 17 21 21 Si 1.86296 * 109.46914 * 195.00001 * 19 18 17 22 22 C 1.38163 * 119.94424 * 179.67603 * 18 17 16 23 23 C 1.38248 * 120.05354 * 0.62217 * 22 18 17 24 24 C 1.38279 * 120.11400 * 359.67572 * 23 22 18 25 25 C 1.38125 * 120.05283 * 0.02562 * 24 23 22 26 26 C 1.52997 * 109.46817 * 59.99873 * 10 9 8 27 27 C 1.52992 * 109.47482 * 300.00014 * 26 10 9 28 28 H 1.09003 * 109.46881 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.46992 * 299.99805 * 1 2 3 30 30 H 1.09005 * 109.47066 * 60.00281 * 1 2 3 31 31 H 1.08998 * 109.47230 * 239.99698 * 2 1 3 32 32 H 1.09001 * 109.46829 * 120.00434 * 2 1 3 33 33 H 1.09002 * 109.47097 * 60.00192 * 8 6 4 34 34 H 1.08998 * 109.47844 * 300.00407 * 8 6 4 35 35 H 1.09000 * 109.47140 * 180.02562 * 9 8 6 36 36 H 1.09002 * 109.47497 * 60.00450 * 9 8 6 37 37 H 0.97005 * 119.99239 * 335.00029 * 12 10 9 38 38 H 1.08995 * 109.47765 * 299.99977 * 15 13 12 39 39 H 1.09000 * 109.47068 * 60.00791 * 15 13 12 40 40 H 1.09003 * 109.46945 * 314.99304 * 19 18 17 41 41 H 0.96693 * 114.00425 * 59.99927 * 20 19 18 42 42 H 1.48504 * 109.99682 * 179.97438 * 21 19 18 43 43 H 1.48500 * 110.00135 * 301.31036 * 21 19 18 44 44 H 1.07998 * 119.97714 * 180.31940 * 22 18 17 45 45 H 1.08001 * 119.93898 * 179.70056 * 23 22 18 46 46 H 1.07997 * 119.97834 * 180.02562 * 24 23 22 47 47 H 1.08001 * 120.03019 * 180.02562 * 25 24 23 48 48 H 1.09002 * 109.47153 * 60.00231 * 26 10 9 49 49 H 1.08998 * 109.47533 * 179.97438 * 26 10 9 50 50 H 1.09002 * 109.47103 * 300.00247 * 27 26 10 51 51 H 1.08996 * 109.47747 * 179.97438 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9373 0.0000 7 1 3.5844 3.4699 0.8896 8 6 5.4486 2.8572 0.0001 9 6 6.0334 4.2710 -0.0011 10 6 5.5619 5.0170 -1.2510 11 1 5.8979 4.4841 -2.1405 12 7 6.1214 6.3710 -1.2518 13 6 6.2850 7.0317 -2.4150 14 8 5.9687 6.5058 -3.4610 15 6 6.8600 8.4248 -2.4157 16 8 6.9333 8.9091 -3.7582 17 6 7.4335 10.1601 -3.9363 18 6 7.5384 10.6910 -5.2135 19 6 7.0971 9.8812 -6.4054 20 8 5.6696 9.8578 -6.4634 21 14 7.7694 10.6515 -7.9627 22 6 8.0410 11.9656 -5.3914 23 6 8.4512 12.7068 -4.2988 24 6 8.3534 12.1775 -3.0251 25 6 7.8458 10.9061 -2.8415 26 6 4.0341 5.0970 -1.2511 27 6 3.4492 3.6833 -1.2499 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 1.8933 -0.5139 -0.8899 32 1 1.8933 -0.5139 0.8900 33 1 5.7846 2.3247 -0.8896 34 1 5.7846 2.3254 0.8903 35 1 7.1219 4.2140 -0.0014 36 1 5.6975 4.8040 0.8885 37 1 6.3741 6.7918 -0.4151 38 1 6.2203 9.0823 -1.8271 39 1 7.8594 8.4056 -1.9810 40 1 7.4738 8.8625 -6.3121 41 1 5.2649 10.7320 -6.5469 42 1 7.3418 9.8618 -9.1455 43 1 7.2889 12.0512 -8.0854 44 1 8.1181 12.3814 -6.3851 45 1 8.8483 13.7011 -4.4405 46 1 8.6741 12.7586 -2.1732 47 1 7.7692 10.4932 -1.8465 48 1 3.6981 5.6299 -0.3615 49 1 3.6981 5.6288 -2.1412 50 1 3.7852 3.1504 -2.1394 51 1 2.3608 3.7403 -1.2495 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_2989392.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:51 Heat of formation + Delta-G solvation = -169.018785 kcal Electronic energy + Delta-G solvation = -32489.632802 eV Core-core repulsion = 27934.763212 eV Total energy + Delta-G solvation = -4554.869590 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.82832 -41.54776 -40.75680 -39.22398 -38.34046 -37.51654 -37.45139 -35.36214 -32.85775 -32.72715 -31.94734 -31.70222 -30.96008 -29.03222 -26.61862 -25.50567 -24.00492 -23.87891 -23.33809 -22.60635 -21.96632 -21.58494 -20.86136 -19.49999 -18.66994 -18.42547 -17.96187 -17.60531 -17.54570 -17.43474 -17.14683 -16.91552 -16.48101 -16.06906 -15.75034 -15.58954 -15.45887 -15.15497 -15.00480 -14.91520 -14.85704 -14.49427 -14.21751 -14.10258 -13.88356 -13.67377 -13.58050 -13.46986 -13.32641 -13.04194 -12.91830 -12.81350 -12.54086 -12.48587 -12.45629 -12.32075 -12.17336 -11.83122 -11.70721 -11.55587 -11.50128 -11.47462 -11.25828 -10.82245 -10.39411 -10.17259 -10.01382 -9.22013 -4.88843 0.19893 0.39664 1.23019 1.38146 1.43495 1.51175 1.63449 1.67045 2.04505 2.54195 2.66585 3.39005 3.41329 3.50291 3.54249 3.60513 3.72850 3.78448 3.82031 3.86005 3.88086 3.96484 3.97834 4.00384 4.01673 4.09628 4.16509 4.22729 4.25420 4.29998 4.30359 4.32858 4.50301 4.52016 4.61747 4.70705 4.73433 4.80856 4.84481 4.89013 4.97448 4.98607 5.01278 5.04396 5.13521 5.18268 5.24452 5.30706 5.36346 5.46998 5.50765 5.67773 6.23359 6.38559 6.60254 6.78369 7.11390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.101 4.101 9 C -0.125 4.125 10 C 0.144 3.856 11 H 0.093 0.907 12 N -0.725 5.725 13 C 0.516 3.484 14 O -0.506 6.506 15 C 0.039 3.961 16 O -0.277 6.277 17 C 0.152 3.848 18 C -0.146 4.146 19 C -0.065 4.065 20 O -0.520 6.520 21 Si 0.688 3.312 22 C -0.083 4.083 23 C -0.151 4.151 24 C -0.072 4.072 25 C -0.212 4.212 26 C -0.128 4.128 27 C -0.108 4.108 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.067 0.933 31 H 0.071 0.929 32 H 0.070 0.930 33 H 0.078 0.922 34 H 0.080 0.920 35 H 0.079 0.921 36 H 0.074 0.926 37 H 0.402 0.598 38 H 0.093 0.907 39 H 0.094 0.906 40 H 0.118 0.882 41 H 0.370 0.630 42 H -0.257 1.257 43 H -0.260 1.260 44 H 0.135 0.865 45 H 0.129 0.871 46 H 0.128 0.872 47 H 0.129 0.871 48 H 0.070 0.930 49 H 0.077 0.923 50 H 0.073 0.927 51 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.677 3.918 5.718 7.132 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.139 4.139 9 C -0.163 4.163 10 C 0.040 3.960 11 H 0.111 0.889 12 N -0.379 5.379 13 C 0.300 3.700 14 O -0.379 6.379 15 C -0.040 4.040 16 O -0.189 6.189 17 C 0.106 3.894 18 C -0.147 4.147 19 C -0.175 4.175 20 O -0.325 6.325 21 Si 0.590 3.410 22 C -0.101 4.101 23 C -0.169 4.169 24 C -0.090 4.090 25 C -0.231 4.231 26 C -0.167 4.167 27 C -0.146 4.146 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.096 0.904 34 H 0.099 0.901 35 H 0.097 0.903 36 H 0.092 0.908 37 H 0.236 0.764 38 H 0.111 0.889 39 H 0.112 0.888 40 H 0.136 0.864 41 H 0.216 0.784 42 H -0.182 1.182 43 H -0.186 1.186 44 H 0.152 0.848 45 H 0.147 0.853 46 H 0.146 0.854 47 H 0.147 0.853 48 H 0.089 0.911 49 H 0.095 0.905 50 H 0.091 0.909 51 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.479 2.780 4.051 5.131 hybrid contribution -0.922 0.528 1.241 1.634 sum 0.557 3.308 5.292 6.266 Atomic orbital electron populations 1.21822 0.92342 1.03254 1.03646 1.23076 0.95593 0.79890 1.02730 1.86503 1.24428 1.32711 1.83770 1.23730 0.80692 0.92605 0.72203 1.90689 1.60460 1.43157 1.45003 1.21178 0.96683 0.89862 1.02250 0.87076 1.21394 0.91561 0.96418 1.04543 1.21814 1.01586 0.95551 0.97310 1.21086 0.93188 0.81780 0.99944 0.88863 1.45877 1.66080 1.17298 1.08658 1.20020 0.78855 0.86848 0.84253 1.90807 1.48049 1.67961 1.31093 1.22481 1.02576 0.94157 0.84813 1.86238 1.78251 1.28138 1.26279 1.18793 0.93189 0.83895 0.93511 1.19640 1.05830 0.95937 0.93261 1.24898 0.84528 1.05440 1.02594 1.86703 1.17512 1.33323 1.94996 0.95116 0.91316 0.78276 0.76287 1.21051 0.96704 0.92616 0.99748 1.21063 1.02876 1.00726 0.92280 1.21024 0.96157 0.94307 0.97557 1.21293 1.06853 0.97006 0.97943 1.21928 0.94688 0.96666 1.03410 1.21494 1.01809 0.95245 0.96099 0.90023 0.91393 0.91347 0.91105 0.91135 0.90362 0.90100 0.90256 0.90781 0.76416 0.88920 0.88838 0.86418 0.78369 1.18193 1.18561 0.84779 0.85331 0.85374 0.85284 0.91111 0.90470 0.90858 0.89866 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 10.29 37.16 0.38 0.59 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.63 10.12 -39.26 -0.40 -1.03 16 4 C 0.47 0.95 7.25 36.01 0.26 1.21 16 5 O -0.51 -2.51 15.73 -18.75 -0.29 -2.80 16 6 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 7 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 8 C -0.10 0.13 4.49 -26.73 -0.12 0.01 16 9 C -0.12 0.39 5.39 -26.73 -0.14 0.24 16 10 C 0.14 -0.19 2.45 -67.93 -0.17 -0.35 16 11 H 0.09 0.10 7.58 -51.93 -0.39 -0.29 16 12 N -0.73 1.52 5.08 -53.80 -0.27 1.25 16 13 C 0.52 0.68 7.87 -10.99 -0.09 0.59 16 14 O -0.51 -3.29 16.16 -14.35 -0.23 -3.52 16 15 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 16 O -0.28 -0.89 9.00 -39.32 -0.35 -1.25 16 17 C 0.15 0.30 6.66 -39.22 -0.26 0.04 16 18 C -0.15 -0.25 5.27 -104.47 -0.55 -0.80 16 19 C -0.06 -0.15 2.38 36.01 0.09 -0.06 16 20 O -0.52 -2.12 12.88 -35.23 -0.45 -2.57 16 21 Si 0.69 0.25 30.26 -169.99 -5.14 -4.89 16 22 C -0.08 -0.01 8.66 -39.61 -0.34 -0.36 16 23 C -0.15 0.09 10.04 -39.56 -0.40 -0.31 16 24 C -0.07 0.06 10.04 -39.61 -0.40 -0.34 16 25 C -0.21 0.06 9.04 -39.43 -0.36 -0.30 16 26 C -0.13 0.15 5.49 -26.74 -0.15 0.01 16 27 C -0.11 0.11 5.13 -26.73 -0.14 -0.03 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 31 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 32 H 0.07 0.04 8.13 -51.93 -0.42 -0.39 16 33 H 0.08 0.01 8.10 -51.93 -0.42 -0.41 16 34 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 35 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 36 H 0.07 -0.33 8.14 -51.93 -0.42 -0.76 16 37 H 0.40 -2.17 8.60 -40.82 -0.35 -2.52 16 38 H 0.09 -0.29 7.66 -51.93 -0.40 -0.69 16 39 H 0.09 -0.33 7.66 -51.93 -0.40 -0.72 16 40 H 0.12 0.38 7.83 -51.93 -0.41 -0.02 16 41 H 0.37 0.22 8.70 45.56 0.40 0.61 16 42 H -0.26 -0.98 7.11 56.52 0.40 -0.57 16 43 H -0.26 -0.36 6.67 56.52 0.38 0.02 16 44 H 0.13 -0.16 4.87 -52.49 -0.26 -0.42 16 45 H 0.13 -0.32 8.06 -52.49 -0.42 -0.74 16 46 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 47 H 0.13 -0.36 6.30 -52.49 -0.33 -0.69 16 48 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 49 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 50 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 51 H 0.08 -0.09 8.11 -51.93 -0.42 -0.51 16 LS Contribution 416.69 15.07 6.28 6.28 Total: 0.00 -11.15 416.69 -11.19 -22.33 By element: Atomic # 1 Polarization: -6.08 SS G_CDS: -8.12 Total: -14.20 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -2.20 Total: 0.40 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.27 Total: 1.25 kcal Atomic # 8 Polarization: -9.44 SS G_CDS: -1.73 Total: -11.17 kcal Atomic # 14 Polarization: 0.25 SS G_CDS: -5.14 Total: -4.89 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -11.15 -11.19 -22.33 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_2989392.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.684 kcal (2) G-P(sol) polarization free energy of solvation -11.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.335 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.019 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds