Wall clock time and date at job start Sun Mar 7 2021 02:30:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45206 * 109.47147 * 2 1 4 4 C 1.34228 * 117.00001 * 179.97438 * 3 2 1 5 5 O 1.20826 * 120.00094 * 0.02562 * 4 3 2 6 6 C 1.50703 * 120.00120 * 179.97438 * 4 3 2 7 7 H 1.09001 * 109.46702 * 59.99746 * 6 4 3 8 8 C 1.53001 * 109.47109 * 179.97438 * 6 4 3 9 9 C 1.52998 * 109.46870 * 180.02562 * 8 6 4 10 10 C 1.53006 * 109.47349 * 300.00289 * 9 8 6 11 11 H 1.09009 * 109.46869 * 300.00267 * 10 9 8 12 12 N 1.46494 * 109.47525 * 180.02562 * 10 9 8 13 13 C 1.34779 * 120.00269 * 154.99740 * 12 10 9 14 14 O 1.21280 * 119.99734 * 0.02562 * 13 12 10 15 15 C 1.50693 * 120.00177 * 180.02562 * 13 12 10 16 16 O 1.42895 * 109.47420 * 180.02562 * 15 13 12 17 17 C 1.35902 * 117.00604 * 179.97438 * 16 15 13 18 18 C 1.38732 * 120.05281 * 359.72207 * 17 16 15 19 19 C 1.38146 * 119.94685 * 179.74629 * 18 17 16 20 20 C 1.38268 * 120.05139 * 0.50730 * 19 18 17 21 21 C 1.50691 * 119.94371 * 179.74626 * 20 19 18 22 22 O 1.42904 * 109.47476 * 120.02192 * 21 20 19 23 23 Si 1.86298 * 109.47327 * 0.02562 * 21 20 19 24 24 C 1.38273 * 120.11389 * 359.76758 * 20 19 18 25 25 C 1.38151 * 120.05280 * 359.97438 * 24 20 19 26 26 C 1.53003 * 109.47188 * 59.99688 * 10 9 8 27 27 C 1.52998 * 109.47231 * 300.00384 * 26 10 9 28 28 H 1.09002 * 109.47153 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46832 * 60.00119 * 1 2 3 30 30 H 1.09004 * 109.47261 * 300.00100 * 1 2 3 31 31 H 1.08998 * 109.47533 * 119.99701 * 2 1 3 32 32 H 1.08996 * 109.47853 * 240.00044 * 2 1 3 33 33 H 1.08994 * 109.47315 * 299.99860 * 8 6 4 34 34 H 1.08998 * 109.46820 * 60.00578 * 8 6 4 35 35 H 1.09004 * 109.47423 * 59.99780 * 9 8 6 36 36 H 1.08999 * 109.47398 * 180.02562 * 9 8 6 37 37 H 0.97001 * 119.99823 * 335.00106 * 12 10 9 38 38 H 1.09006 * 109.46828 * 300.00057 * 15 13 12 39 39 H 1.09003 * 109.47630 * 59.99443 * 15 13 12 40 40 H 1.08002 * 120.02834 * 359.97438 * 18 17 16 41 41 H 1.07996 * 119.97684 * 180.23502 * 19 18 17 42 42 H 1.09000 * 109.47274 * 240.01798 * 21 20 19 43 43 H 0.96700 * 114.00172 * 300.00332 * 22 21 20 44 44 H 1.48499 * 110.00137 * 179.97438 * 23 21 20 45 45 H 1.48502 * 109.99951 * 301.32221 * 23 21 20 46 46 H 1.08000 * 119.97406 * 179.97438 * 24 20 19 47 47 H 1.07996 * 120.02425 * 180.02562 * 25 24 20 48 48 H 1.08998 * 109.46642 * 60.00055 * 26 10 9 49 49 H 1.08994 * 109.47132 * 180.02562 * 26 10 9 50 50 H 1.09004 * 109.47423 * 300.00223 * 27 26 10 51 51 H 1.08999 * 109.47398 * 179.97438 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9208 2.9375 0.0000 7 1 3.5843 3.4701 0.8895 8 6 5.4487 2.8574 0.0014 9 6 6.0334 4.2712 0.0015 10 6 5.5630 5.0178 -1.2484 11 1 5.8997 4.4853 -2.1380 12 7 6.1233 6.3713 -1.2487 13 6 6.2879 7.0324 -2.4116 14 8 5.9717 6.5068 -3.4579 15 6 6.8649 8.4245 -2.4119 16 8 6.9389 8.9092 -3.7541 17 6 7.4400 10.1600 -3.9318 18 6 7.8466 10.9076 -2.8362 19 6 8.3604 12.1768 -3.0198 20 6 8.4599 12.7060 -4.2933 21 6 9.0155 14.0928 -4.4902 22 8 10.1777 14.0272 -5.3191 23 14 9.4724 14.8194 -2.8367 24 6 8.0501 11.9650 -5.3864 25 6 7.5404 10.6933 -5.2085 26 6 4.0350 5.0978 -1.2498 27 6 3.4503 3.6840 -1.2499 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 0.5139 0.8900 31 1 1.8934 -0.5138 0.8900 32 1 1.8934 -0.5138 -0.8899 33 1 5.7838 2.3259 0.8921 34 1 5.7853 2.3246 -0.8879 35 1 5.6966 4.8037 0.8910 36 1 7.1219 4.2142 0.0021 37 1 6.3760 6.7918 -0.4118 38 1 6.2260 9.0827 -1.8230 39 1 7.8642 8.4038 -1.9770 40 1 7.7649 10.4964 -1.8409 41 1 8.6806 12.7577 -2.1675 42 1 8.2636 14.7210 -4.9679 43 1 10.8900 13.4835 -4.9555 44 1 10.0222 16.1870 -3.0173 45 1 8.2789 14.8637 -1.9541 46 1 8.1284 12.3808 -6.3801 47 1 7.2209 10.1149 -6.0626 48 1 3.6983 5.6302 -0.3603 49 1 3.6999 5.6293 -2.1404 50 1 3.7870 3.1515 -2.1394 51 1 2.3618 3.7410 -1.2505 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_2989410.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:54 Heat of formation + Delta-G solvation = -171.988005 kcal Electronic energy + Delta-G solvation = -31694.675505 eV Core-core repulsion = 27139.677160 eV Total energy + Delta-G solvation = -4554.998345 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.90277 -41.53011 -40.76452 -39.35623 -38.73018 -37.68725 -37.09697 -35.41081 -32.82214 -32.42999 -31.84373 -31.75877 -31.30944 -29.12713 -26.25764 -25.44537 -24.09010 -23.84409 -23.57817 -22.42669 -21.95422 -21.59547 -20.83576 -19.47797 -18.78781 -18.48136 -18.08929 -17.69185 -17.60487 -17.39330 -17.19259 -16.82241 -16.38147 -15.96460 -15.87802 -15.58256 -15.44617 -15.19022 -14.99744 -14.89951 -14.63232 -14.54508 -14.31139 -14.13469 -13.84717 -13.73278 -13.56038 -13.50630 -13.38952 -13.24866 -12.95956 -12.78334 -12.53637 -12.40441 -12.23502 -12.19649 -12.05341 -12.03863 -11.71839 -11.63356 -11.54738 -11.47040 -11.35102 -10.93526 -10.39566 -10.14850 -10.03438 -9.21205 -4.97531 0.28521 0.31739 1.08255 1.35588 1.47061 1.48666 1.63936 1.65824 2.00240 2.60515 2.66916 3.43284 3.50506 3.56842 3.59920 3.65451 3.76093 3.84631 3.90830 3.95694 3.97297 4.01846 4.05536 4.06136 4.14307 4.16573 4.28889 4.30702 4.31775 4.32265 4.42550 4.43825 4.51591 4.61315 4.68244 4.75406 4.81815 4.87242 4.92812 4.98080 5.04352 5.07403 5.09441 5.14199 5.16814 5.24679 5.26416 5.27573 5.41654 5.46935 5.50836 5.70909 6.28583 6.50934 6.64374 6.80620 7.17092 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.542 6.542 6 C -0.074 4.074 7 H 0.140 0.860 8 C -0.100 4.100 9 C -0.112 4.112 10 C 0.143 3.857 11 H 0.061 0.939 12 N -0.703 5.703 13 C 0.512 3.488 14 O -0.574 6.574 15 C 0.036 3.964 16 O -0.321 6.321 17 C 0.121 3.879 18 C -0.199 4.199 19 C -0.076 4.076 20 C -0.161 4.161 21 C -0.075 4.075 22 O -0.559 6.559 23 Si 0.783 3.217 24 C -0.061 4.061 25 C -0.167 4.167 26 C -0.121 4.121 27 C -0.104 4.104 28 H 0.095 0.905 29 H 0.067 0.933 30 H 0.071 0.929 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.080 0.920 34 H 0.055 0.945 35 H 0.103 0.897 36 H 0.086 0.914 37 H 0.423 0.577 38 H 0.126 0.874 39 H 0.129 0.871 40 H 0.167 0.833 41 H 0.154 0.846 42 H 0.102 0.898 43 H 0.395 0.605 44 H -0.304 1.304 45 H -0.280 1.280 46 H 0.131 0.869 47 H 0.124 0.876 48 H 0.096 0.904 49 H 0.053 0.947 50 H 0.053 0.947 51 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.571 1.710 9.633 9.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.431 6.431 6 C -0.092 4.092 7 H 0.158 0.842 8 C -0.139 4.139 9 C -0.149 4.149 10 C 0.038 3.962 11 H 0.079 0.921 12 N -0.357 5.357 13 C 0.298 3.702 14 O -0.452 6.452 15 C -0.042 4.042 16 O -0.234 6.234 17 C 0.076 3.924 18 C -0.217 4.217 19 C -0.093 4.093 20 C -0.162 4.162 21 C -0.184 4.184 22 O -0.367 6.367 23 Si 0.689 3.311 24 C -0.080 4.080 25 C -0.186 4.186 26 C -0.159 4.159 27 C -0.142 4.142 28 H 0.114 0.886 29 H 0.086 0.914 30 H 0.090 0.910 31 H 0.087 0.913 32 H 0.082 0.918 33 H 0.099 0.901 34 H 0.074 0.926 35 H 0.122 0.878 36 H 0.105 0.895 37 H 0.262 0.738 38 H 0.144 0.856 39 H 0.146 0.854 40 H 0.184 0.816 41 H 0.171 0.829 42 H 0.119 0.881 43 H 0.245 0.755 44 H -0.233 1.233 45 H -0.207 1.207 46 H 0.149 0.851 47 H 0.142 0.858 48 H 0.114 0.886 49 H 0.072 0.928 50 H 0.072 0.928 51 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -0.035 1.889 8.938 9.135 hybrid contribution -0.460 -0.420 -0.688 0.928 sum -0.495 1.469 8.250 8.394 Atomic orbital electron populations 1.21822 0.90682 1.04237 1.03756 1.23234 0.96931 0.79474 1.02360 1.86516 1.24385 1.33336 1.83470 1.24397 0.80518 0.93450 0.70964 1.90671 1.61134 1.44544 1.46786 1.21270 0.96667 0.88129 1.03167 0.84248 1.21376 0.91450 0.97548 1.03485 1.21741 1.01899 0.94085 0.97218 1.21027 0.93277 0.82138 0.99735 0.92079 1.45694 1.64491 1.16694 1.08837 1.20577 0.77925 0.87682 0.83993 1.90773 1.51314 1.69634 1.33483 1.22775 1.05073 0.92792 0.83546 1.86130 1.78983 1.29032 1.29281 1.19205 0.94485 0.83851 0.94875 1.21513 1.05135 0.96054 0.98979 1.21076 0.96923 0.94976 0.96346 1.20359 1.04246 0.97689 0.93904 1.25203 0.89655 0.96265 1.07287 1.86464 1.26283 1.74344 1.49641 0.93740 0.83505 0.79332 0.74509 1.20891 0.95019 0.92498 0.99545 1.20613 1.05459 0.96921 0.95617 1.21851 0.94535 0.96149 1.03376 1.21431 1.01959 0.95365 0.95438 0.88639 0.91396 0.91032 0.91282 0.91792 0.90089 0.92596 0.87809 0.89545 0.73835 0.85592 0.85358 0.81564 0.82887 0.88066 0.75529 1.23265 1.20654 0.85086 0.85752 0.88593 0.92838 0.92796 0.89574 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.49 10.29 71.98 0.74 1.23 16 2 C 0.05 0.08 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.26 10.12 -51.40 -0.52 -1.78 16 4 C 0.46 1.96 7.26 71.24 0.52 2.47 16 5 O -0.54 -5.90 15.73 21.96 0.35 -5.56 16 6 C -0.07 0.23 2.63 -11.54 -0.03 0.20 16 7 H 0.14 -1.18 8.14 -2.39 -0.02 -1.20 16 8 C -0.10 0.34 4.49 30.59 0.14 0.48 16 9 C -0.11 0.97 5.39 30.60 0.16 1.14 16 10 C 0.14 -0.56 2.45 45.00 0.11 -0.45 16 11 H 0.06 0.19 7.58 -2.38 -0.02 0.18 16 12 N -0.70 4.82 5.08 -442.52 -2.25 2.57 16 13 C 0.51 0.48 7.87 87.65 0.69 1.17 16 14 O -0.57 -7.68 16.16 16.01 0.26 -7.42 16 15 C 0.04 -0.18 5.22 71.23 0.37 0.19 16 16 O -0.32 -1.60 9.67 -73.41 -0.71 -2.31 16 17 C 0.12 0.32 6.69 22.51 0.15 0.47 16 18 C -0.20 0.74 9.04 22.37 0.20 0.94 16 19 C -0.08 0.28 8.66 22.25 0.19 0.47 16 20 C -0.16 0.03 5.39 -19.85 -0.11 -0.07 16 21 C -0.07 0.06 2.82 71.23 0.20 0.26 16 22 O -0.56 -0.25 12.77 -148.98 -1.90 -2.16 16 23 Si 0.78 -2.95 29.78 68.60 2.04 -0.91 16 24 C -0.06 -0.17 9.61 22.26 0.21 0.04 16 25 C -0.17 -0.78 9.99 22.37 0.22 -0.56 16 26 C -0.12 0.46 5.50 30.59 0.17 0.63 16 27 C -0.10 0.24 5.14 30.59 0.16 0.40 16 28 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 29 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 30 H 0.07 -0.27 8.14 -2.38 -0.02 -0.29 16 31 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 32 H 0.06 0.16 8.13 -2.39 -0.02 0.14 16 33 H 0.08 -0.24 8.10 -2.39 -0.02 -0.26 16 34 H 0.06 0.07 8.10 -2.39 -0.02 0.05 16 35 H 0.10 -1.43 8.14 -2.38 -0.02 -1.45 16 36 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 37 H 0.42 -6.47 8.60 -92.71 -0.80 -7.27 16 38 H 0.13 -1.45 7.65 -2.38 -0.02 -1.47 16 39 H 0.13 -1.52 7.68 -2.39 -0.02 -1.54 16 40 H 0.17 -1.91 6.30 -2.91 -0.02 -1.93 16 41 H 0.15 -1.37 4.87 -2.91 -0.01 -1.39 16 42 H 0.10 0.10 7.96 -2.39 -0.02 0.08 16 43 H 0.39 -3.05 8.70 -74.06 -0.64 -3.70 16 44 H -0.30 -1.37 7.11 99.48 0.71 -0.66 16 45 H -0.28 0.05 7.11 99.48 0.71 0.76 16 46 H 0.13 0.29 8.06 -2.91 -0.02 0.27 16 47 H 0.12 0.68 8.06 -2.91 -0.02 0.66 16 48 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 49 H 0.05 0.09 8.14 -2.39 -0.02 0.07 16 50 H 0.05 0.08 8.14 -2.38 -0.02 0.06 16 51 H 0.09 -0.24 8.11 -2.39 -0.02 -0.26 16 Total: 0.00 -30.89 417.46 1.36 -29.53 By element: Atomic # 1 Polarization: -21.07 SS G_CDS: -0.45 Total: -21.52 kcal Atomic # 6 Polarization: 4.99 SS G_CDS: 4.55 Total: 9.54 kcal Atomic # 7 Polarization: 4.82 SS G_CDS: -2.25 Total: 2.57 kcal Atomic # 8 Polarization: -16.68 SS G_CDS: -2.53 Total: -19.21 kcal Atomic # 14 Polarization: -2.95 SS G_CDS: 2.04 Total: -0.91 kcal Total: -30.89 1.36 -29.53 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_2989410.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.458 kcal (2) G-P(sol) polarization free energy of solvation -30.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.365 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.530 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.988 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds