Wall clock time and date at job start Sun Mar 7 2021 02:30:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45206 * 109.46850 * 2 1 4 4 C 1.34224 * 116.99841 * 180.02562 * 3 2 1 5 5 O 1.20828 * 120.00118 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00059 * 179.97438 * 4 3 2 7 7 H 1.09002 * 109.47060 * 60.00008 * 6 4 3 8 8 C 1.53002 * 109.47419 * 180.02562 * 6 4 3 9 9 C 1.52997 * 109.47415 * 179.97438 * 8 6 4 10 10 C 1.53002 * 109.46978 * 300.00098 * 9 8 6 11 11 H 1.09002 * 109.46838 * 299.99316 * 10 9 8 12 12 N 1.46497 * 109.46729 * 179.97438 * 10 9 8 13 13 C 1.34778 * 119.99664 * 155.00120 * 12 10 9 14 14 O 1.21275 * 120.00492 * 359.97438 * 13 12 10 15 15 C 1.50701 * 119.99875 * 179.97438 * 13 12 10 16 16 C 1.52997 * 109.47444 * 179.97438 * 15 13 12 17 17 O 1.42898 * 109.47419 * 179.97438 * 16 15 13 18 18 C 1.35905 * 116.99977 * 179.97438 * 17 16 15 19 19 C 1.38732 * 120.05339 * 359.73528 * 18 17 16 20 20 C 1.38149 * 119.93892 * 179.74498 * 19 18 17 21 21 C 1.38266 * 120.05683 * 0.49902 * 20 19 18 22 22 C 1.50699 * 119.94260 * 179.74814 * 21 20 19 23 23 O 1.42901 * 109.47037 * 245.02296 * 22 21 20 24 24 Si 1.86304 * 109.47278 * 5.02565 * 22 21 20 25 25 C 1.38259 * 120.11355 * 359.77266 * 21 20 19 26 26 C 1.38150 * 120.05542 * 359.97438 * 25 21 20 27 27 C 1.53002 * 109.47128 * 59.99726 * 10 9 8 28 28 C 1.52992 * 109.47106 * 300.00123 * 27 10 9 29 29 H 1.09004 * 109.47695 * 60.00078 * 1 2 3 30 30 H 1.09000 * 109.47210 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47315 * 300.00042 * 1 2 3 32 32 H 1.09002 * 109.47315 * 239.99958 * 2 1 3 33 33 H 1.08991 * 109.47430 * 119.99794 * 2 1 3 34 34 H 1.09000 * 109.46986 * 300.00096 * 8 6 4 35 35 H 1.09002 * 109.47075 * 59.99368 * 8 6 4 36 36 H 1.09002 * 109.47045 * 59.99931 * 9 8 6 37 37 H 1.08998 * 109.47171 * 179.97438 * 9 8 6 38 38 H 0.97000 * 120.00413 * 334.99384 * 12 10 9 39 39 H 1.09006 * 109.47337 * 299.99806 * 15 13 12 40 40 H 1.09006 * 109.47440 * 59.99416 * 15 13 12 41 41 H 1.08995 * 109.47253 * 300.00023 * 16 15 13 42 42 H 1.09006 * 109.47022 * 59.99475 * 16 15 13 43 43 H 1.07995 * 120.02975 * 359.97438 * 19 18 17 44 44 H 1.08000 * 119.97225 * 180.27357 * 20 19 18 45 45 H 1.09004 * 109.46720 * 125.02164 * 22 21 20 46 46 H 0.96694 * 113.99853 * 60.00592 * 23 22 21 47 47 H 1.48493 * 109.99912 * 58.67924 * 24 22 21 48 48 H 1.48500 * 109.99988 * 180.02562 * 24 22 21 49 49 H 1.07996 * 119.97709 * 179.97438 * 25 21 20 50 50 H 1.08000 * 120.02925 * 180.02562 * 26 25 21 51 51 H 1.09002 * 109.47070 * 60.00059 * 27 10 9 52 52 H 1.08996 * 109.46550 * 179.97438 * 27 10 9 53 53 H 1.09002 * 109.47103 * 299.99915 * 28 27 10 54 54 H 1.08998 * 109.46862 * 180.02562 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9206 2.9375 -0.0012 7 1 3.5849 3.4699 0.8888 8 6 5.4485 2.8575 -0.0023 9 6 6.0333 4.2714 -0.0036 10 6 5.5607 5.0176 -1.2529 11 1 5.8960 4.4849 -2.1428 12 7 6.1201 6.3715 -1.2538 13 6 6.2827 7.0327 -2.4169 14 8 5.9664 6.5066 -3.4629 15 6 6.8577 8.4257 -2.4178 16 6 6.9361 8.9442 -3.8551 17 8 7.4808 10.2653 -3.8559 18 6 7.6191 10.8750 -5.0626 19 6 7.2435 10.2130 -6.2225 20 6 7.3802 10.8370 -7.4475 21 6 7.9004 12.1160 -7.5190 22 6 8.0536 12.7920 -8.8571 23 8 9.4408 13.0026 -9.1282 24 14 7.3178 11.7132 -10.1858 25 6 8.2807 12.7757 -6.3649 26 6 8.1412 12.1582 -5.1370 27 6 4.0327 5.0976 -1.2517 28 6 3.4481 3.6838 -1.2504 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5138 0.8900 32 1 1.8933 -0.5138 -0.8900 33 1 1.8933 -0.5137 0.8899 34 1 5.7852 2.3255 0.8875 35 1 5.7838 2.3252 -0.8925 36 1 5.6980 4.8040 0.8864 37 1 7.1218 4.2143 -0.0040 38 1 6.3734 6.7922 -0.4173 39 1 6.2184 9.0831 -1.8284 40 1 7.8574 8.4065 -1.9838 41 1 7.5756 8.2869 -4.4441 42 1 5.9366 8.9634 -4.2895 43 1 6.8412 9.2123 -6.1676 44 1 7.0838 10.3238 -8.3504 45 1 7.5368 13.7516 -8.8406 46 1 9.9635 12.1897 -9.1578 47 1 5.8831 11.4605 -9.8983 48 1 7.4632 12.3685 -11.5105 49 1 8.6871 13.7745 -6.4233 50 1 8.4380 12.6740 -4.2358 51 1 3.6975 5.6302 -0.3618 52 1 3.6962 5.6296 -2.1415 53 1 3.7833 3.1511 -2.1404 54 1 2.3596 3.7408 -1.2500 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_4549602.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:30:59 Heat of formation + Delta-G solvation = -180.747177 kcal Electronic energy + Delta-G solvation = -33434.168382 eV Core-core repulsion = 28723.252592 eV Total energy + Delta-G solvation = -4710.915790 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.197 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -41.88897 -41.39382 -40.91176 -39.33457 -38.94313 -37.69636 -37.16502 -35.35776 -33.44888 -32.74070 -32.07630 -31.83915 -31.54224 -30.62573 -26.72928 -25.93171 -25.04240 -23.87002 -23.76946 -23.27510 -22.23385 -21.89031 -21.45927 -20.75754 -19.49666 -18.76076 -18.32097 -17.85715 -17.70303 -17.55686 -17.45032 -17.31095 -16.89627 -16.44483 -16.11582 -15.92429 -15.68505 -15.52313 -15.27584 -14.97562 -14.79990 -14.69706 -14.57029 -14.44211 -14.28658 -14.14790 -13.99011 -13.77182 -13.56565 -13.46972 -13.26607 -12.96232 -12.89047 -12.84783 -12.69394 -12.53185 -12.38798 -12.21330 -12.19249 -12.03986 -11.76920 -11.71257 -11.63036 -11.54486 -11.46669 -11.35047 -10.95623 -10.41560 -10.08919 -10.04457 -9.21693 -5.01540 0.28167 0.30291 1.08173 1.31822 1.56400 1.60954 1.61966 1.73696 1.94522 2.50141 2.65768 3.45387 3.53632 3.56045 3.60109 3.62980 3.73303 3.83684 3.89568 3.91826 3.92844 3.96174 4.01911 4.04023 4.08623 4.17571 4.26439 4.29145 4.31087 4.32525 4.35374 4.42711 4.45560 4.50295 4.62514 4.67688 4.71377 4.75206 4.79949 4.82057 4.87332 4.93917 4.97515 5.04352 5.07800 5.09588 5.14287 5.17868 5.24976 5.28229 5.30222 5.42484 5.49438 5.50807 5.71946 6.32605 6.51593 6.64277 6.78298 7.21066 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.541 6.541 6 C -0.074 4.074 7 H 0.137 0.863 8 C -0.100 4.100 9 C -0.114 4.114 10 C 0.142 3.858 11 H 0.065 0.935 12 N -0.710 5.710 13 C 0.520 3.480 14 O -0.583 6.583 15 C -0.133 4.133 16 C 0.072 3.928 17 O -0.321 6.321 18 C 0.123 3.877 19 C -0.210 4.210 20 C -0.078 4.078 21 C -0.162 4.162 22 C -0.065 4.065 23 O -0.556 6.556 24 Si 0.767 3.233 25 C -0.060 4.060 26 C -0.159 4.159 27 C -0.120 4.120 28 C -0.103 4.103 29 H 0.068 0.932 30 H 0.095 0.905 31 H 0.070 0.930 32 H 0.064 0.936 33 H 0.068 0.932 34 H 0.078 0.922 35 H 0.057 0.943 36 H 0.099 0.901 37 H 0.084 0.916 38 H 0.420 0.580 39 H 0.127 0.873 40 H 0.127 0.873 41 H 0.067 0.933 42 H 0.064 0.936 43 H 0.141 0.859 44 H 0.145 0.855 45 H 0.107 0.893 46 H 0.395 0.605 47 H -0.290 1.290 48 H -0.298 1.298 49 H 0.139 0.861 50 H 0.142 0.858 51 H 0.091 0.909 52 H 0.057 0.943 53 H 0.056 0.944 54 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.726 -0.354 5.800 5.856 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.431 6.431 6 C -0.093 4.093 7 H 0.155 0.845 8 C -0.138 4.138 9 C -0.151 4.151 10 C 0.037 3.963 11 H 0.083 0.917 12 N -0.362 5.362 13 C 0.307 3.693 14 O -0.463 6.463 15 C -0.172 4.172 16 C -0.003 4.003 17 O -0.235 6.235 18 C 0.078 3.922 19 C -0.228 4.228 20 C -0.096 4.096 21 C -0.163 4.163 22 C -0.176 4.176 23 O -0.364 6.364 24 Si 0.674 3.326 25 C -0.078 4.078 26 C -0.177 4.177 27 C -0.158 4.158 28 C -0.141 4.141 29 H 0.087 0.913 30 H 0.114 0.886 31 H 0.089 0.911 32 H 0.083 0.917 33 H 0.087 0.913 34 H 0.097 0.903 35 H 0.076 0.924 36 H 0.117 0.883 37 H 0.102 0.898 38 H 0.258 0.742 39 H 0.145 0.855 40 H 0.145 0.855 41 H 0.085 0.915 42 H 0.082 0.918 43 H 0.158 0.842 44 H 0.162 0.838 45 H 0.124 0.876 46 H 0.244 0.756 47 H -0.217 1.217 48 H -0.226 1.226 49 H 0.157 0.843 50 H 0.160 0.840 51 H 0.109 0.891 52 H 0.075 0.925 53 H 0.074 0.926 54 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -1.502 -0.444 4.635 4.892 hybrid contribution -0.156 -0.006 0.379 0.410 sum -1.658 -0.450 5.013 5.299 Atomic orbital electron populations 1.21822 0.90679 1.04239 1.03758 1.23235 0.96931 0.79463 1.02369 1.86516 1.24366 1.33345 1.83468 1.24383 0.80525 0.93423 0.70969 1.90671 1.61133 1.44534 1.46788 1.21266 0.96629 0.88167 1.03225 0.84504 1.21366 0.91479 0.97479 1.03456 1.21738 1.01763 0.94206 0.97429 1.21006 0.93264 0.82480 0.99544 0.91718 1.45886 1.64306 1.16638 1.09391 1.20630 0.77263 0.87818 0.83599 1.90743 1.52342 1.70151 1.33048 1.21442 1.05828 0.92845 0.97102 1.22468 0.98922 0.80779 0.98179 1.85958 1.79217 1.30786 1.27545 1.19180 0.95830 0.92798 0.84380 1.21428 1.07025 1.02098 0.92273 1.20989 0.97060 0.93902 0.97632 1.20320 1.04059 0.95614 0.96316 1.25033 0.87909 1.05587 0.99031 1.86459 1.18412 1.37790 1.93713 0.93817 0.79416 0.85165 0.74245 1.20980 0.96216 1.00009 0.90619 1.20670 1.04340 0.93309 0.99402 1.21843 0.94573 0.96083 1.03346 1.21427 1.01924 0.95389 0.95393 0.91335 0.88636 0.91093 0.91715 0.91344 0.90317 0.92415 0.88288 0.89769 0.74236 0.85517 0.85510 0.91509 0.91776 0.84173 0.83756 0.87569 0.75553 1.21662 1.22577 0.84321 0.84027 0.89061 0.92450 0.92561 0.89605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.52 10.29 71.98 0.74 1.26 16 2 C 0.05 0.07 6.19 71.98 0.45 0.51 16 3 O -0.36 -1.19 10.12 -51.36 -0.52 -1.71 16 4 C 0.46 1.90 7.25 71.24 0.52 2.42 16 5 O -0.54 -5.82 15.73 21.96 0.35 -5.48 16 6 C -0.07 0.23 2.63 -11.54 -0.03 0.20 16 7 H 0.14 -1.09 8.14 -2.39 -0.02 -1.10 16 8 C -0.10 0.32 4.49 30.59 0.14 0.45 16 9 C -0.11 0.91 5.39 30.59 0.16 1.08 16 10 C 0.14 -0.60 2.45 44.99 0.11 -0.49 16 11 H 0.06 0.12 7.58 -2.39 -0.02 0.11 16 12 N -0.71 4.75 5.08 -442.53 -2.25 2.50 16 13 C 0.52 -0.65 7.79 87.66 0.68 0.04 16 14 O -0.58 -4.72 15.64 -3.01 -0.05 -4.77 16 15 C -0.13 0.78 6.07 29.85 0.18 0.96 16 16 C 0.07 -0.02 4.03 71.98 0.29 0.27 16 17 O -0.32 -0.83 10.14 -92.48 -0.94 -1.76 16 18 C 0.12 0.47 6.69 22.51 0.15 0.62 16 19 C -0.21 -0.52 9.04 22.37 0.20 -0.31 16 20 C -0.08 -0.07 8.66 22.26 0.19 0.12 16 21 C -0.16 -0.27 5.35 -19.85 -0.11 -0.37 16 22 C -0.07 -0.05 2.80 71.24 0.20 0.15 16 23 O -0.56 -0.66 12.83 -148.98 -1.91 -2.57 16 24 Si 0.77 -0.44 29.80 68.60 2.04 1.61 16 25 C -0.06 -0.14 9.68 22.25 0.22 0.08 16 26 C -0.16 -0.44 9.99 22.37 0.22 -0.22 16 27 C -0.12 0.52 5.49 30.59 0.17 0.69 16 28 C -0.10 0.30 5.13 30.59 0.16 0.46 16 29 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 30 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 31 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 32 H 0.06 0.14 8.13 -2.39 -0.02 0.12 16 33 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 34 H 0.08 -0.19 8.10 -2.39 -0.02 -0.21 16 35 H 0.06 0.06 8.10 -2.39 -0.02 0.04 16 36 H 0.10 -1.22 8.14 -2.39 -0.02 -1.24 16 37 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 38 H 0.42 -5.60 8.60 -92.71 -0.80 -6.40 16 39 H 0.13 -1.21 8.14 -2.38 -0.02 -1.23 16 40 H 0.13 -1.20 8.14 -2.38 -0.02 -1.22 16 41 H 0.07 0.06 7.61 -2.39 -0.02 0.05 16 42 H 0.06 0.08 7.63 -2.38 -0.02 0.07 16 43 H 0.14 0.09 6.30 -2.91 -0.02 0.07 16 44 H 0.15 -0.47 4.90 -2.91 -0.01 -0.48 16 45 H 0.11 0.17 7.96 -2.38 -0.02 0.15 16 46 H 0.39 -2.62 8.70 -74.06 -0.64 -3.27 16 47 H -0.29 -1.34 7.11 99.48 0.71 -0.63 16 48 H -0.30 -1.98 7.11 99.48 0.71 -1.28 16 49 H 0.14 0.05 8.06 -2.91 -0.02 0.03 16 50 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 51 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 52 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 53 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 54 H 0.09 -0.28 8.11 -2.39 -0.02 -0.30 16 Total: 0.00 -24.45 438.52 0.88 -23.57 By element: Atomic # 1 Polarization: -18.79 SS G_CDS: -0.49 Total: -19.28 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: 4.64 Total: 7.89 kcal Atomic # 7 Polarization: 4.75 SS G_CDS: -2.25 Total: 2.50 kcal Atomic # 8 Polarization: -13.22 SS G_CDS: -3.07 Total: -16.29 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: 2.04 Total: 1.61 kcal Total: -24.45 0.88 -23.57 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_4549602.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -157.174 kcal (2) G-P(sol) polarization free energy of solvation -24.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.625 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.573 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds