Wall clock time and date at job start Sun Mar 7 2021 02:31:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45203 * 109.46837 * 2 1 4 4 C 1.34229 * 116.99579 * 180.02562 * 3 2 1 5 5 O 1.20824 * 120.00177 * 0.02562 * 4 3 2 6 6 C 1.50703 * 119.99682 * 179.97438 * 4 3 2 7 7 H 1.09001 * 109.46980 * 299.99944 * 6 4 3 8 8 C 1.53006 * 109.47126 * 59.99713 * 6 4 3 9 9 C 1.52997 * 109.47127 * 179.97438 * 8 6 4 10 10 C 1.53000 * 109.47060 * 300.00449 * 9 8 6 11 11 H 1.09001 * 109.47194 * 299.99650 * 10 9 8 12 12 N 1.46499 * 109.46840 * 180.02562 * 10 9 8 13 13 C 1.34782 * 120.00074 * 155.00031 * 12 10 9 14 14 O 1.21279 * 119.99782 * 359.97438 * 13 12 10 15 15 C 1.50703 * 120.00040 * 179.97438 * 13 12 10 16 16 C 1.53002 * 109.47014 * 179.97438 * 15 13 12 17 17 O 1.42900 * 109.46941 * 179.97438 * 16 15 13 18 18 C 1.35903 * 116.99753 * 179.97438 * 17 16 15 19 19 C 1.38709 * 120.05175 * 179.73067 * 18 17 16 20 20 C 1.38170 * 119.94274 * 179.77244 * 19 18 17 21 21 C 1.50697 * 119.97389 * 180.23210 * 20 19 18 22 22 O 1.42904 * 109.46901 * 300.24647 * 21 20 19 23 23 Si 1.86296 * 109.47032 * 180.25073 * 21 20 19 24 24 C 1.38244 * 120.05328 * 0.47854 * 20 19 18 25 25 C 1.38298 * 120.11211 * 359.77217 * 24 20 19 26 26 C 1.38122 * 120.05460 * 0.02562 * 25 24 20 27 27 C 1.52996 * 109.47328 * 60.00126 * 10 9 8 28 28 C 1.52997 * 109.47084 * 179.97438 * 6 4 3 29 29 H 1.08998 * 109.46790 * 179.97438 * 1 2 3 30 30 H 1.08993 * 109.47437 * 299.99801 * 1 2 3 31 31 H 1.09000 * 109.47218 * 59.99963 * 1 2 3 32 32 H 1.09003 * 109.46711 * 240.00428 * 2 1 3 33 33 H 1.09000 * 109.47218 * 120.00037 * 2 1 3 34 34 H 1.08998 * 109.46505 * 59.99690 * 8 6 4 35 35 H 1.08996 * 109.46884 * 300.00571 * 8 6 4 36 36 H 1.09002 * 109.47153 * 180.02562 * 9 8 6 37 37 H 1.09001 * 109.46832 * 60.00321 * 9 8 6 38 38 H 0.97002 * 120.00427 * 334.99530 * 12 10 9 39 39 H 1.09002 * 109.47083 * 299.99967 * 15 13 12 40 40 H 1.09003 * 109.46851 * 59.99654 * 15 13 12 41 41 H 1.09004 * 109.47003 * 300.00323 * 16 15 13 42 42 H 1.08997 * 109.46609 * 60.00348 * 16 15 13 43 43 H 1.07998 * 120.02916 * 359.97438 * 19 18 17 44 44 H 1.08999 * 109.47074 * 60.24983 * 21 20 19 45 45 H 0.96697 * 114.00008 * 300.00503 * 22 21 20 46 46 H 1.48497 * 110.00415 * 58.67931 * 23 21 20 47 47 H 1.48502 * 110.00330 * 179.97438 * 23 21 20 48 48 H 1.07999 * 119.94313 * 179.75165 * 24 20 19 49 49 H 1.07995 * 119.96793 * 179.97438 * 25 24 20 50 50 H 1.08002 * 120.02751 * 180.02562 * 26 25 24 51 51 H 1.08992 * 109.47554 * 59.99639 * 27 10 9 52 52 H 1.09004 * 109.47108 * 179.97438 * 27 10 9 53 53 H 1.09002 * 109.47045 * 60.00033 * 28 6 4 54 54 H 1.09001 * 109.47375 * 299.99958 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9207 2.9375 -0.0012 7 1 3.5844 3.4693 -0.8912 8 6 3.4495 3.6848 1.2481 9 6 4.0348 5.0984 1.2477 10 6 5.5626 5.0178 1.2475 11 1 5.8986 4.4858 2.1375 12 7 6.1230 6.3714 1.2478 13 6 7.3583 6.5893 1.7410 14 8 8.0057 5.6649 2.1849 15 6 7.9349 7.9817 1.7408 16 6 9.3377 7.9528 2.3509 17 8 9.8847 9.2729 2.3502 18 6 11.1344 9.4232 2.8627 19 6 11.7287 10.6763 2.8882 20 6 12.9974 10.8273 3.4141 21 6 13.6416 12.1892 3.4469 22 8 13.7522 12.6960 2.1153 23 14 15.3389 12.0553 4.2032 24 6 13.6784 9.7292 3.9056 25 6 13.0901 8.4779 3.8766 26 6 11.8203 8.3224 3.3557 27 6 6.0338 4.2706 -0.0017 28 6 5.4486 2.8574 -0.0010 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 -0.3634 0.5138 -0.8900 32 1 1.8933 -0.5138 -0.8901 33 1 1.8934 -0.5138 0.8900 34 1 3.7857 3.1529 2.1380 35 1 2.3610 3.7417 1.2484 36 1 3.6994 5.6307 2.1379 37 1 3.6988 5.6305 0.3577 38 1 5.6051 7.1109 0.8930 39 1 7.9911 8.3515 0.7170 40 1 7.2961 8.6395 2.3302 41 1 9.2811 7.5830 3.3748 42 1 9.9765 7.2948 1.7618 43 1 11.1989 11.5337 2.5003 44 1 13.0303 12.8661 4.0438 45 1 14.2839 12.1429 1.5269 46 1 16.1723 11.1107 3.4169 47 1 15.9852 13.3917 4.2408 48 1 14.6716 9.8486 4.3126 49 1 13.6243 7.6216 4.2607 50 1 11.3611 7.3451 3.3336 51 1 5.6979 4.8026 -0.8917 52 1 7.1223 4.2136 -0.0021 53 1 5.7846 2.3249 -0.8908 54 1 5.7845 2.3257 0.8892 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_4549614.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:31:04 Heat of formation + Delta-G solvation = -180.369267 kcal Electronic energy + Delta-G solvation = -33422.130559 eV Core-core repulsion = 28711.231157 eV Total energy + Delta-G solvation = -4710.899403 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.197 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -41.89929 -41.41557 -40.93560 -39.35291 -38.95632 -37.70794 -37.38566 -35.37489 -33.43481 -32.72125 -32.48745 -31.85254 -31.21576 -30.42365 -27.08067 -26.04449 -24.86620 -23.90429 -23.68416 -23.52858 -22.17330 -21.85270 -21.42434 -20.80395 -19.38155 -18.76411 -18.24589 -17.77822 -17.73679 -17.62294 -17.48549 -17.22878 -17.11057 -16.79269 -16.27696 -16.06878 -15.67909 -15.50495 -15.25721 -15.04337 -14.92901 -14.75990 -14.60181 -14.45924 -14.13585 -14.05149 -14.04989 -13.75996 -13.50118 -13.28409 -13.20699 -12.95757 -12.94317 -12.86388 -12.77399 -12.54607 -12.40252 -12.38770 -12.19715 -11.99969 -11.82094 -11.66557 -11.58373 -11.56141 -11.41716 -11.37633 -10.98774 -10.68293 -10.11372 -9.94481 -9.28421 -4.90078 0.18680 0.38264 1.08030 1.29870 1.53427 1.59614 1.62625 1.71846 1.96957 2.48501 2.65030 3.40092 3.41714 3.56407 3.59914 3.61542 3.64183 3.83454 3.88529 3.88852 3.95061 3.97996 4.02891 4.07790 4.10143 4.17065 4.22749 4.27649 4.29463 4.30252 4.32055 4.40467 4.41284 4.55394 4.60432 4.64844 4.68010 4.74833 4.77026 4.82367 4.88627 4.93176 4.97398 5.02347 5.08277 5.09453 5.14594 5.23819 5.25027 5.28492 5.37095 5.42057 5.42861 5.49117 5.69308 6.31987 6.46934 6.49434 6.64150 7.18939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.053 3.947 3 O -0.357 6.357 4 C 0.462 3.538 5 O -0.545 6.545 6 C -0.074 4.074 7 H 0.138 0.862 8 C -0.104 4.104 9 C -0.114 4.114 10 C 0.142 3.858 11 H 0.064 0.936 12 N -0.709 5.709 13 C 0.519 3.481 14 O -0.584 6.584 15 C -0.133 4.133 16 C 0.074 3.926 17 O -0.324 6.324 18 C 0.117 3.883 19 C -0.141 4.141 20 C -0.081 4.081 21 C -0.086 4.086 22 O -0.548 6.548 23 Si 0.774 3.226 24 C -0.157 4.157 25 C -0.076 4.076 26 C -0.212 4.212 27 C -0.120 4.120 28 C -0.098 4.098 29 H 0.094 0.906 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.065 0.935 33 H 0.065 0.935 34 H 0.059 0.941 35 H 0.097 0.903 36 H 0.088 0.912 37 H 0.100 0.900 38 H 0.421 0.579 39 H 0.126 0.874 40 H 0.128 0.872 41 H 0.065 0.935 42 H 0.062 0.938 43 H 0.129 0.871 44 H 0.126 0.874 45 H 0.386 0.614 46 H -0.282 1.282 47 H -0.302 1.302 48 H 0.148 0.852 49 H 0.152 0.848 50 H 0.135 0.865 51 H 0.090 0.910 52 H 0.052 0.948 53 H 0.067 0.933 54 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.994 2.050 0.323 6.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.020 4.020 3 O -0.273 6.273 4 C 0.307 3.693 5 O -0.435 6.435 6 C -0.093 4.093 7 H 0.155 0.845 8 C -0.142 4.142 9 C -0.151 4.151 10 C 0.037 3.963 11 H 0.083 0.917 12 N -0.361 5.361 13 C 0.307 3.693 14 O -0.464 6.464 15 C -0.172 4.172 16 C -0.002 4.002 17 O -0.238 6.238 18 C 0.072 3.928 19 C -0.160 4.160 20 C -0.082 4.082 21 C -0.194 4.194 22 O -0.356 6.356 23 Si 0.679 3.321 24 C -0.174 4.174 25 C -0.094 4.094 26 C -0.230 4.230 27 C -0.159 4.159 28 C -0.137 4.137 29 H 0.112 0.888 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.084 0.916 33 H 0.083 0.917 34 H 0.078 0.922 35 H 0.116 0.884 36 H 0.107 0.893 37 H 0.118 0.882 38 H 0.258 0.742 39 H 0.144 0.856 40 H 0.146 0.854 41 H 0.083 0.917 42 H 0.081 0.919 43 H 0.147 0.853 44 H 0.144 0.856 45 H 0.235 0.765 46 H -0.208 1.208 47 H -0.230 1.230 48 H 0.165 0.835 49 H 0.170 0.830 50 H 0.153 0.847 51 H 0.109 0.891 52 H 0.071 0.929 53 H 0.085 0.915 54 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -5.048 1.800 0.681 5.402 hybrid contribution 0.013 -0.699 -1.388 1.554 sum -5.035 1.101 -0.707 5.202 Atomic orbital electron populations 1.21817 0.90496 1.04221 1.03876 1.23240 0.97026 0.79496 1.02275 1.86509 1.24108 1.33265 1.83458 1.24386 0.80580 0.93384 0.70937 1.90678 1.61267 1.44663 1.46856 1.21254 0.95693 0.88373 1.03938 0.84456 1.21475 1.02488 0.95258 0.94979 1.21752 0.91474 0.96667 1.05248 1.21020 0.94498 0.82619 0.98181 0.91743 1.45881 1.16461 1.11103 1.62690 1.20630 0.81748 0.90572 0.76381 1.90747 1.60823 1.46655 1.48192 1.21443 0.95194 0.94404 1.06166 1.22443 0.94533 0.81509 1.01688 1.85953 1.28312 1.31831 1.77730 1.19140 0.84518 0.94526 0.94622 1.20323 0.95802 0.95345 1.04501 1.20170 0.93850 0.96092 0.98064 1.25339 1.12167 0.93787 0.88134 1.86569 1.74873 1.52850 1.21313 0.93914 0.72033 0.77283 0.88843 1.21174 1.01052 0.92329 1.02878 1.21242 0.93817 0.98157 0.96148 1.21550 0.97670 0.98520 1.05288 1.21834 1.00249 0.94713 0.99060 1.21320 0.92319 0.97260 1.02782 0.88755 0.91071 0.91079 0.91621 0.91705 0.92198 0.88405 0.89315 0.88165 0.74162 0.85597 0.85428 0.91663 0.91934 0.85349 0.85595 0.76456 1.20843 1.22999 0.83466 0.83046 0.84685 0.89146 0.92912 0.91459 0.92787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.61 10.29 71.98 0.74 1.35 16 2 C 0.05 0.05 6.19 71.98 0.45 0.50 16 3 O -0.36 -0.93 10.12 -51.41 -0.52 -1.46 16 4 C 0.46 2.01 7.26 71.24 0.52 2.53 16 5 O -0.54 -6.51 15.73 21.97 0.35 -6.17 16 6 C -0.07 0.21 2.63 -11.54 -0.03 0.17 16 7 H 0.14 -1.06 8.14 -2.39 -0.02 -1.08 16 8 C -0.10 0.61 5.14 30.60 0.16 0.77 16 9 C -0.11 1.05 5.39 30.59 0.16 1.21 16 10 C 0.14 -0.53 2.45 44.99 0.11 -0.42 16 11 H 0.06 0.16 7.58 -2.39 -0.02 0.14 16 12 N -0.71 4.26 5.08 -442.53 -2.25 2.02 16 13 C 0.52 -0.05 7.79 87.66 0.68 0.63 16 14 O -0.58 -5.59 15.64 -3.03 -0.05 -5.63 16 15 C -0.13 0.60 6.07 29.85 0.18 0.78 16 16 C 0.07 0.10 4.03 71.98 0.29 0.39 16 17 O -0.32 -1.49 10.14 -92.46 -0.94 -2.42 16 18 C 0.12 0.64 6.69 22.51 0.15 0.79 16 19 C -0.14 -0.70 9.55 22.37 0.21 -0.49 16 20 C -0.08 -0.17 5.39 -19.88 -0.11 -0.27 16 21 C -0.09 -0.04 2.82 71.24 0.20 0.16 16 22 O -0.55 -2.03 12.76 -148.98 -1.90 -3.93 16 23 Si 0.77 -1.29 29.79 68.60 2.04 0.76 16 24 C -0.16 0.00 8.67 22.29 0.19 0.19 16 25 C -0.08 -0.05 10.04 22.26 0.22 0.18 16 26 C -0.21 -0.73 9.04 22.37 0.20 -0.52 16 27 C -0.12 0.28 5.50 30.58 0.17 0.44 16 28 C -0.10 -0.04 4.49 30.58 0.14 0.09 16 29 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 30 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 31 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 32 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 33 H 0.06 0.12 8.13 -2.39 -0.02 0.10 16 34 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 35 H 0.10 -0.75 8.11 -2.39 -0.02 -0.77 16 36 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 37 H 0.10 -1.34 8.14 -2.39 -0.02 -1.36 16 38 H 0.42 -5.44 8.60 -92.71 -0.80 -6.23 16 39 H 0.13 -1.01 8.14 -2.39 -0.02 -1.03 16 40 H 0.13 -1.06 8.14 -2.39 -0.02 -1.08 16 41 H 0.07 0.17 7.62 -2.38 -0.02 0.16 16 42 H 0.06 0.19 7.62 -2.39 -0.02 0.17 16 43 H 0.13 0.67 8.06 -2.91 -0.02 0.65 16 44 H 0.13 -0.13 7.96 -2.39 -0.02 -0.15 16 45 H 0.39 -0.70 8.70 -74.06 -0.64 -1.34 16 46 H -0.28 -0.57 7.11 99.48 0.71 0.14 16 47 H -0.30 -1.77 7.11 99.48 0.71 -1.06 16 48 H 0.15 -0.66 4.87 -2.91 -0.01 -0.67 16 49 H 0.15 -0.63 8.06 -2.91 -0.02 -0.65 16 50 H 0.14 0.29 6.30 -2.91 -0.02 0.28 16 51 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 52 H 0.05 0.15 8.14 -2.38 -0.02 0.14 16 53 H 0.07 0.16 8.10 -2.39 -0.02 0.15 16 54 H 0.05 0.27 8.10 -2.39 -0.02 0.25 16 Total: 0.00 -25.45 438.40 0.89 -24.57 By element: Atomic # 1 Polarization: -15.73 SS G_CDS: -0.49 Total: -16.22 kcal Atomic # 6 Polarization: 3.85 SS G_CDS: 4.64 Total: 8.50 kcal Atomic # 7 Polarization: 4.26 SS G_CDS: -2.25 Total: 2.02 kcal Atomic # 8 Polarization: -16.55 SS G_CDS: -3.06 Total: -19.61 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: 2.04 Total: 0.76 kcal Total: -25.45 0.89 -24.57 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_4549614.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -155.804 kcal (2) G-P(sol) polarization free energy of solvation -25.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.255 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.565 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds