Wall clock time and date at job start Sun Mar 7 2021 02:31:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45196 * 109.47483 * 2 1 4 4 C 1.34227 * 117.00748 * 179.97438 * 3 2 1 5 5 O 1.20824 * 119.99496 * 0.02562 * 4 3 2 6 6 C 1.50698 * 120.00546 * 179.97438 * 4 3 2 7 7 H 1.09005 * 109.46834 * 60.00480 * 6 4 3 8 8 C 1.52993 * 109.47199 * 180.02562 * 6 4 3 9 9 C 1.53001 * 109.47403 * 180.02562 * 8 6 4 10 10 C 1.53003 * 109.46849 * 300.00354 * 9 8 6 11 11 H 1.08995 * 109.47167 * 299.99571 * 10 9 8 12 12 N 1.46499 * 109.46876 * 179.97438 * 10 9 8 13 13 C 1.34779 * 119.99872 * 154.99967 * 12 10 9 14 14 O 1.21273 * 120.00093 * 359.97438 * 13 12 10 15 15 C 1.50703 * 119.99944 * 179.97438 * 13 12 10 16 16 F 1.39905 * 109.47157 * 59.99823 * 15 13 12 17 17 F 1.39900 * 109.47159 * 300.00124 * 15 13 12 18 18 O 1.42898 * 109.47171 * 180.02562 * 15 13 12 19 19 C 1.35903 * 116.99959 * 180.02562 * 18 15 13 20 20 C 1.38732 * 120.05707 * 359.72247 * 19 18 15 21 21 C 1.38138 * 119.94426 * 179.74660 * 20 19 18 22 22 C 1.38275 * 120.05527 * 0.51044 * 21 20 19 23 23 C 1.50699 * 119.94379 * 179.74616 * 22 21 20 24 24 O 1.42900 * 109.47093 * 120.01916 * 23 22 21 25 25 Si 1.86301 * 109.47124 * 0.02562 * 23 22 21 26 26 C 1.38264 * 120.10885 * 359.76496 * 22 21 20 27 27 C 1.38142 * 120.05865 * 359.97438 * 26 22 21 28 28 C 1.52993 * 109.47407 * 59.99649 * 10 9 8 29 29 C 1.53001 * 109.47403 * 300.00012 * 28 10 9 30 30 H 1.09002 * 109.46789 * 299.99822 * 1 2 3 31 31 H 1.08991 * 109.47172 * 59.99771 * 1 2 3 32 32 H 1.09002 * 109.46753 * 180.02562 * 1 2 3 33 33 H 1.09002 * 109.47302 * 240.00054 * 2 1 3 34 34 H 1.08998 * 109.47565 * 120.00135 * 2 1 3 35 35 H 1.09004 * 109.47532 * 60.00270 * 8 6 4 36 36 H 1.09007 * 109.47132 * 300.00071 * 8 6 4 37 37 H 1.08999 * 109.47426 * 179.97438 * 9 8 6 38 38 H 1.09004 * 109.46788 * 59.99530 * 9 8 6 39 39 H 0.97000 * 120.00420 * 334.99211 * 12 10 9 40 40 H 1.08003 * 120.02290 * 359.97438 * 20 19 18 41 41 H 1.08000 * 119.97715 * 180.22659 * 21 20 19 42 42 H 1.08994 * 109.46827 * 240.01994 * 23 22 21 43 43 H 0.96701 * 114.00066 * 299.99759 * 24 23 22 44 44 H 1.48500 * 110.00103 * 58.68399 * 25 23 22 45 45 H 1.48504 * 109.99635 * 179.97438 * 25 23 22 46 46 H 1.08001 * 119.96677 * 179.97438 * 26 22 21 47 47 H 1.07998 * 120.03062 * 180.02562 * 27 26 22 48 48 H 1.09004 * 109.47532 * 60.00026 * 28 10 9 49 49 H 1.08997 * 109.47615 * 179.97438 * 28 10 9 50 50 H 1.09004 * 109.46788 * 300.00470 * 29 28 10 51 51 H 1.08999 * 109.47426 * 180.02562 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.5845 3.4700 0.8896 8 6 5.4486 2.8573 0.0001 9 6 6.0335 4.2711 0.0002 10 6 5.5620 5.0181 -1.2491 11 1 5.8980 4.4860 -2.1390 12 7 6.1215 6.3720 -1.2487 13 6 6.2852 7.0339 -2.4113 14 8 5.9697 6.5084 -3.4578 15 6 6.8602 8.4269 -2.4109 16 9 8.1429 8.4017 -1.8528 17 9 6.0392 9.2701 -1.6546 18 8 6.9335 8.9124 -3.7529 19 6 7.4338 10.1635 -3.9299 20 6 7.8403 10.9108 -2.8340 21 6 8.3534 12.1802 -3.0171 22 6 8.4521 12.7103 -4.2903 23 6 9.0068 14.0977 -4.4866 24 8 10.1688 14.0331 -5.3159 25 14 9.4639 14.8235 -2.8328 26 6 8.0423 11.9697 -5.3837 27 6 7.5336 10.6977 -5.2064 28 6 4.0342 5.0982 -1.2492 29 6 3.4493 3.6844 -1.2493 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8899 32 1 -0.3633 -1.0277 0.0005 33 1 1.8934 -0.5138 -0.8900 34 1 1.8934 -0.5138 0.8899 35 1 5.7847 2.3248 -0.8896 36 1 5.7845 2.3255 0.8904 37 1 7.1220 4.2140 0.0008 38 1 5.6974 4.8032 0.8902 39 1 6.3741 6.7922 -0.4117 40 1 7.7591 10.4989 -1.8389 41 1 8.6734 12.7610 -2.1646 42 1 8.2545 14.7256 -4.9637 43 1 10.8815 13.4896 -4.9528 44 1 10.4658 13.9594 -2.1583 45 1 10.0129 16.1915 -3.0129 46 1 8.1201 12.3862 -6.3771 47 1 7.2140 10.1195 -6.0607 48 1 3.6981 5.6303 -0.3592 49 1 3.6983 5.6307 -2.1389 50 1 3.7854 3.1523 -2.1393 51 1 2.3608 3.7414 -1.2498 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_4549640.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:31:42 Heat of formation + Delta-G solvation = -261.890414 kcal Electronic energy + Delta-G solvation = -37879.051481 eV Core-core repulsion = 32381.246724 eV Total energy + Delta-G solvation = -5497.804757 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.162 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -50.88060 -48.84876 -41.92150 -41.45343 -41.18553 -39.49580 -39.05619 -37.70935 -37.37134 -35.72618 -32.80919 -32.46253 -32.06743 -31.87050 -31.35336 -28.81772 -26.42058 -25.50351 -24.47221 -23.90045 -23.67916 -22.76076 -22.32453 -21.93538 -21.09781 -20.52098 -19.79845 -19.67363 -18.74873 -18.60967 -17.79740 -17.67665 -17.63602 -17.39396 -16.97488 -16.69067 -16.44281 -16.25824 -15.88892 -15.83777 -15.55556 -15.41796 -15.35623 -15.24445 -15.11127 -15.09508 -14.94909 -14.56220 -14.42101 -14.39071 -14.22107 -14.17260 -13.85678 -13.54239 -13.53244 -13.30034 -13.03198 -12.94871 -12.86575 -12.53696 -12.45890 -12.41146 -12.26084 -12.21254 -11.78146 -11.66871 -11.60443 -11.56135 -11.50063 -11.27476 -10.65167 -10.47643 -10.18341 -9.59205 -4.92830 0.01711 0.15890 0.46957 0.64837 1.10095 1.30066 1.59503 1.62871 1.68905 1.95739 2.00741 2.45519 2.77018 3.23569 3.39110 3.44362 3.51293 3.55011 3.60948 3.65028 3.72251 3.84916 3.96649 3.99858 4.03975 4.09758 4.12979 4.20817 4.24180 4.26888 4.31630 4.40539 4.40950 4.48327 4.59254 4.73276 4.81682 4.83160 4.83599 4.88903 4.90628 5.00796 5.03836 5.04652 5.06075 5.08860 5.14703 5.21463 5.31895 5.34282 5.38943 5.45292 5.82397 5.87843 6.47632 6.48512 6.66021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.054 3.946 3 O -0.360 6.360 4 C 0.463 3.537 5 O -0.541 6.541 6 C -0.076 4.076 7 H 0.140 0.860 8 C -0.099 4.099 9 C -0.115 4.115 10 C 0.140 3.860 11 H 0.079 0.921 12 N -0.680 5.680 13 C 0.517 3.483 14 O -0.508 6.508 15 C 0.434 3.566 16 F -0.172 7.172 17 F -0.168 7.168 18 O -0.306 6.306 19 C 0.086 3.914 20 C -0.193 4.193 21 C -0.077 4.077 22 C -0.139 4.139 23 C -0.078 4.078 24 O -0.547 6.547 25 Si 0.762 3.238 26 C -0.058 4.058 27 C -0.137 4.137 28 C -0.124 4.124 29 C -0.102 4.102 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.094 0.906 33 H 0.064 0.936 34 H 0.068 0.932 35 H 0.060 0.940 36 H 0.081 0.919 37 H 0.088 0.912 38 H 0.104 0.896 39 H 0.425 0.575 40 H 0.143 0.857 41 H 0.154 0.846 42 H 0.130 0.870 43 H 0.386 0.614 44 H -0.282 1.282 45 H -0.301 1.301 46 H 0.149 0.851 47 H 0.144 0.856 48 H 0.097 0.903 49 H 0.062 0.938 50 H 0.060 0.940 51 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.570 1.386 6.493 7.538 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.431 6.431 6 C -0.094 4.094 7 H 0.157 0.843 8 C -0.137 4.137 9 C -0.153 4.153 10 C 0.037 3.963 11 H 0.098 0.902 12 N -0.333 5.333 13 C 0.295 3.705 14 O -0.381 6.381 15 C 0.356 3.644 16 F -0.154 7.154 17 F -0.150 7.150 18 O -0.223 6.223 19 C 0.043 3.957 20 C -0.211 4.211 21 C -0.094 4.094 22 C -0.140 4.140 23 C -0.187 4.187 24 O -0.355 6.355 25 Si 0.667 3.333 26 C -0.076 4.076 27 C -0.155 4.155 28 C -0.162 4.162 29 C -0.141 4.141 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.113 0.887 33 H 0.083 0.917 34 H 0.086 0.914 35 H 0.079 0.921 36 H 0.100 0.900 37 H 0.107 0.893 38 H 0.122 0.878 39 H 0.264 0.736 40 H 0.161 0.839 41 H 0.172 0.828 42 H 0.148 0.852 43 H 0.236 0.764 44 H -0.209 1.209 45 H -0.230 1.230 46 H 0.167 0.833 47 H 0.161 0.839 48 H 0.116 0.884 49 H 0.080 0.920 50 H 0.078 0.922 51 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -3.404 1.258 5.757 6.806 hybrid contribution 1.241 -0.719 -0.241 1.455 sum -2.163 0.539 5.516 5.949 Atomic orbital electron populations 1.21821 0.90723 1.04205 1.03772 1.23226 0.96897 0.79488 1.02351 1.86512 1.24387 1.33297 1.83465 1.24363 0.80515 0.93404 0.70983 1.90676 1.61138 1.44545 1.46771 1.21285 0.96583 0.88213 1.03358 0.84283 1.21362 0.91484 0.97018 1.03843 1.21782 1.02178 0.94394 0.96932 1.21367 0.93942 0.79979 1.01019 0.90244 1.45824 1.62352 1.17320 1.07800 1.19404 0.80382 0.84657 0.86086 1.90861 1.48713 1.66412 1.32125 1.21796 0.76331 0.89135 0.77108 1.93197 1.40156 1.96726 1.85279 1.93199 1.72244 1.73238 1.76290 1.86648 1.79221 1.31256 1.25174 1.19247 0.97388 0.82960 0.96080 1.21608 1.04442 0.96905 0.98144 1.21028 0.97051 0.94161 0.97197 1.20425 1.02318 0.97769 0.93460 1.25183 0.90013 0.96017 1.07453 1.86578 1.26859 1.73853 1.48222 0.94162 0.87166 0.75770 0.76187 1.21046 0.94482 0.92040 1.00035 1.20700 1.03448 0.96810 0.94562 1.21894 0.93518 0.96774 1.04060 1.21429 1.02189 0.94867 0.95577 0.91092 0.91308 0.88709 0.91717 0.91379 0.92068 0.89997 0.89341 0.87776 0.73632 0.83933 0.82846 0.85189 0.76435 1.20865 1.22952 0.83298 0.83857 0.88450 0.91962 0.92167 0.89208 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.59 10.29 71.98 0.74 1.33 16 2 C 0.05 0.03 6.19 71.98 0.45 0.48 16 3 O -0.36 -0.84 10.12 -51.38 -0.52 -1.36 16 4 C 0.46 1.35 7.26 71.24 0.52 1.87 16 5 O -0.54 -5.26 15.73 21.97 0.35 -4.91 16 6 C -0.08 0.35 2.63 -11.54 -0.03 0.32 16 7 H 0.14 -1.33 8.14 -2.38 -0.02 -1.35 16 8 C -0.10 0.47 4.49 30.59 0.14 0.61 16 9 C -0.12 1.08 5.39 30.60 0.16 1.24 16 10 C 0.14 -0.72 2.45 44.99 0.11 -0.61 16 11 H 0.08 -0.03 7.58 -2.39 -0.02 -0.05 16 12 N -0.68 3.40 5.08 -442.55 -2.25 1.16 16 13 C 0.52 1.46 7.31 87.66 0.64 2.10 16 14 O -0.51 -5.35 16.16 16.03 0.26 -5.09 16 15 C 0.43 1.22 2.05 71.24 0.15 1.36 16 16 F -0.17 -0.23 15.31 44.97 0.69 0.46 16 17 F -0.17 -0.08 15.28 44.97 0.69 0.61 16 18 O -0.31 -2.34 9.60 -73.42 -0.71 -3.05 16 19 C 0.09 0.47 6.48 22.51 0.15 0.61 16 20 C -0.19 -0.42 8.26 22.36 0.18 -0.24 16 21 C -0.08 0.06 8.66 22.25 0.19 0.25 16 22 C -0.14 0.04 5.39 -19.85 -0.11 -0.06 16 23 C -0.08 0.14 2.82 71.24 0.20 0.34 16 24 O -0.55 -0.79 12.77 -148.98 -1.90 -2.70 16 25 Si 0.76 -2.22 29.78 68.60 2.04 -0.17 16 26 C -0.06 -0.06 9.60 22.25 0.21 0.16 16 27 C -0.14 -0.48 9.99 22.37 0.22 -0.26 16 28 C -0.12 0.71 5.49 30.59 0.17 0.88 16 29 C -0.10 0.47 5.14 30.60 0.16 0.63 16 30 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 31 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 32 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 33 H 0.06 0.10 8.13 -2.39 -0.02 0.08 16 34 H 0.07 0.06 8.13 -2.39 -0.02 0.04 16 35 H 0.06 -0.05 8.10 -2.38 -0.02 -0.07 16 36 H 0.08 -0.32 8.10 -2.38 -0.02 -0.34 16 37 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 38 H 0.10 -1.45 8.14 -2.38 -0.02 -1.47 16 39 H 0.43 -4.70 8.60 -92.71 -0.80 -5.50 16 40 H 0.14 0.01 5.10 -2.91 -0.01 0.00 16 41 H 0.15 -0.83 4.87 -2.91 -0.01 -0.85 16 42 H 0.13 -0.49 7.96 -2.39 -0.02 -0.51 16 43 H 0.39 -1.47 8.70 -74.06 -0.64 -2.11 16 44 H -0.28 -0.25 7.11 99.48 0.71 0.46 16 45 H -0.30 -1.49 7.11 99.48 0.71 -0.78 16 46 H 0.15 -0.21 8.06 -2.91 -0.02 -0.24 16 47 H 0.14 0.28 8.06 -2.91 -0.02 0.25 16 48 H 0.10 -0.95 8.14 -2.38 -0.02 -0.96 16 49 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 50 H 0.06 -0.09 8.14 -2.38 -0.02 -0.11 16 51 H 0.09 -0.45 8.11 -2.39 -0.02 -0.47 16 Total: 0.00 -22.77 426.73 2.49 -20.28 By element: Atomic # 1 Polarization: -15.80 SS G_CDS: -0.41 Total: -16.22 kcal Atomic # 6 Polarization: 6.75 SS G_CDS: 4.25 Total: 11.00 kcal Atomic # 7 Polarization: 3.40 SS G_CDS: -2.25 Total: 1.16 kcal Atomic # 8 Polarization: -14.59 SS G_CDS: -2.52 Total: -17.11 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 1.38 Total: 1.07 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: 2.04 Total: -0.17 kcal Total: -22.77 2.49 -20.28 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_4549640.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -241.611 kcal (2) G-P(sol) polarization free energy of solvation -22.768 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -264.379 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.280 kcal (6) G-S(sol) free energy of system = (1) + (5) -261.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds