Wall clock time and date at job start Sun Mar 7 2021 02:31:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45203 * 109.47096 * 2 1 4 4 C 1.34229 * 116.99579 * 179.97438 * 3 2 1 5 5 O 1.20819 * 120.00672 * 359.97438 * 4 3 2 6 6 C 1.50703 * 119.99682 * 179.97438 * 4 3 2 7 7 H 1.09002 * 109.47152 * 59.99843 * 6 4 3 8 8 C 1.53005 * 109.47304 * 179.97438 * 6 4 3 9 9 C 1.52997 * 109.47452 * 180.02562 * 8 6 4 10 10 C 1.53002 * 109.46817 * 300.00239 * 9 8 6 11 11 H 1.08992 * 109.47063 * 299.99823 * 10 9 8 12 12 N 1.46499 * 109.46799 * 179.97438 * 10 9 8 13 13 C 1.34778 * 119.99771 * 85.00174 * 12 10 9 14 14 O 1.21279 * 120.00041 * 359.97438 * 13 12 10 15 15 C 1.50703 * 119.99935 * 179.97438 * 13 12 10 16 16 O 1.42895 * 109.47270 * 179.97438 * 15 13 12 17 17 C 1.35899 * 117.00454 * 180.02562 * 16 15 13 18 18 C 1.38713 * 120.05967 * 179.72764 * 17 16 15 19 19 C 1.38165 * 119.94384 * 179.72457 * 18 17 16 20 20 C 1.50698 * 119.97435 * 180.27668 * 19 18 17 21 21 O 1.42901 * 109.46854 * 300.29324 * 20 19 18 22 22 Si 1.86299 * 109.47183 * 180.29592 * 20 19 18 23 23 C 1.38253 * 120.05386 * 0.56938 * 19 18 17 24 24 C 1.38282 * 120.11264 * 359.68315 * 23 19 18 25 25 C 1.38127 * 120.05600 * 0.04617 * 24 23 19 26 26 C 1.53000 * 109.47233 * 60.00194 * 10 9 8 27 27 C 1.52997 * 109.47060 * 299.99657 * 26 10 9 28 28 H 1.08993 * 109.47027 * 300.00255 * 1 2 3 29 29 H 1.09000 * 109.46905 * 59.99996 * 1 2 3 30 30 H 1.08998 * 109.47049 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.47476 * 240.00007 * 2 1 3 32 32 H 1.09000 * 109.46905 * 120.00003 * 2 1 3 33 33 H 1.09002 * 109.46935 * 59.99966 * 8 6 4 34 34 H 1.09001 * 109.46812 * 300.00308 * 8 6 4 35 35 H 1.08993 * 109.47194 * 179.97438 * 9 8 6 36 36 H 1.09002 * 109.46695 * 59.99734 * 9 8 6 37 37 H 0.97006 * 120.00568 * 264.99947 * 12 10 9 38 38 H 1.08995 * 109.47091 * 300.00103 * 15 13 12 39 39 H 1.08999 * 109.47030 * 59.99811 * 15 13 12 40 40 H 1.07996 * 120.02724 * 359.97438 * 18 17 16 41 41 H 1.08997 * 109.47478 * 60.29063 * 20 19 18 42 42 H 0.96698 * 114.00712 * 300.00156 * 21 20 19 43 43 H 1.48501 * 110.00010 * 58.67970 * 22 20 19 44 44 H 1.48510 * 109.99787 * 179.97438 * 22 20 19 45 45 H 1.08004 * 119.94105 * 179.70052 * 23 19 18 46 46 H 1.07992 * 119.97342 * 180.02562 * 24 23 19 47 47 H 1.07997 * 120.02469 * 180.02562 * 25 24 23 48 48 H 1.09002 * 109.47398 * 59.99826 * 26 10 9 49 49 H 1.09001 * 109.47194 * 180.02562 * 26 10 9 50 50 H 1.08996 * 109.47853 * 180.02562 * 27 26 10 51 51 H 1.09002 * 109.47153 * 300.00319 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0000 7 1 3.5844 3.4701 0.8895 8 6 5.4487 2.8573 0.0014 9 6 6.0336 4.2711 0.0015 10 6 5.5631 5.0176 -1.2484 11 1 5.8998 4.4852 -2.1379 12 7 6.1226 6.3716 -1.2480 13 6 7.3582 6.5902 -1.7400 14 8 8.0070 5.6661 -2.1826 15 6 7.9335 7.9831 -1.7402 16 8 9.2448 7.9568 -2.3075 17 6 9.9087 9.1402 -2.3821 18 6 11.1880 9.1867 -2.9164 19 6 11.8585 10.3921 -2.9964 20 6 13.2459 10.4444 -3.5825 21 8 14.1174 9.6082 -2.8188 22 14 13.8726 12.1983 -3.5392 23 6 11.2602 11.5493 -2.5336 24 6 9.9871 11.5048 -1.9957 25 6 9.3103 10.3031 -1.9186 26 6 4.0352 5.0978 -1.2498 27 6 3.4504 3.6840 -1.2499 28 1 -0.3633 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 1.8934 -0.5138 -0.8900 32 1 1.8933 -0.5138 0.8900 33 1 5.7855 2.3245 -0.8879 34 1 5.7838 2.3258 0.8921 35 1 7.1220 4.2140 0.0030 36 1 5.6968 4.8035 0.8910 37 1 5.6039 7.1107 -0.8937 38 1 7.2949 8.6399 -2.3307 39 1 7.9883 8.3537 -0.7166 40 1 11.6578 8.2822 -3.2734 41 1 13.2180 10.0939 -4.6142 42 1 14.1909 9.8619 -1.8886 43 1 13.8854 12.6986 -2.1411 44 1 15.2404 12.2632 -4.1140 45 1 11.7880 12.4898 -2.5926 46 1 9.5217 12.4101 -1.6352 47 1 8.3158 10.2690 -1.4988 48 1 3.6985 5.6302 -0.3602 49 1 3.7000 5.6292 -2.1405 50 1 2.3619 3.7410 -1.2513 51 1 3.7871 3.1516 -2.1394 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_4860298.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:31:55 Heat of formation + Delta-G solvation = -171.646944 kcal Electronic energy + Delta-G solvation = -31774.814363 eV Core-core repulsion = 27219.830808 eV Total energy + Delta-G solvation = -4554.983555 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.84206 -41.51627 -40.76982 -39.38880 -38.70100 -37.54735 -37.28346 -35.39679 -32.84181 -32.51306 -31.99574 -31.95860 -31.08122 -28.99333 -26.83081 -25.43543 -24.11936 -23.69954 -23.67200 -22.61490 -21.92040 -21.55225 -20.90680 -19.36320 -18.65343 -18.59924 -17.92020 -17.58725 -17.50130 -17.45284 -17.29350 -17.04486 -16.73150 -16.20483 -15.96385 -15.57642 -15.34078 -15.27454 -15.02216 -14.98929 -14.73050 -14.52542 -14.16876 -14.11898 -13.94743 -13.87057 -13.68695 -13.48000 -13.38037 -13.00341 -12.92122 -12.80891 -12.60608 -12.55974 -12.46179 -12.31939 -12.18252 -12.00812 -11.74787 -11.59893 -11.51712 -11.47381 -11.28960 -10.87778 -10.65211 -10.20937 -9.94973 -9.29103 -4.95273 0.17427 0.38069 1.21748 1.24934 1.42067 1.46237 1.60777 1.65012 1.97134 2.50833 2.64083 3.31498 3.38317 3.44926 3.47411 3.55664 3.60966 3.72229 3.79459 3.84475 3.85521 3.94012 3.97230 3.98786 3.99608 4.03460 4.16817 4.17001 4.21771 4.27444 4.28297 4.35378 4.49253 4.53203 4.59044 4.62021 4.70463 4.78566 4.81405 4.84738 4.92221 4.94749 4.99461 5.05598 5.11597 5.19198 5.21095 5.32695 5.33673 5.41522 5.49205 5.62352 6.21080 6.35592 6.41672 6.77340 7.06560 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.060 3.940 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.504 6.504 6 C -0.080 4.080 7 H 0.111 0.889 8 C -0.102 4.102 9 C -0.129 4.129 10 C 0.144 3.856 11 H 0.094 0.906 12 N -0.725 5.725 13 C 0.516 3.484 14 O -0.509 6.509 15 C 0.041 3.959 16 O -0.288 6.288 17 C 0.129 3.871 18 C -0.121 4.121 19 C -0.078 4.078 20 C -0.078 4.078 21 O -0.527 6.527 22 Si 0.690 3.310 23 C -0.154 4.154 24 C -0.073 4.073 25 C -0.206 4.206 26 C -0.124 4.124 27 C -0.107 4.107 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.081 0.919 31 H 0.071 0.929 32 H 0.070 0.930 33 H 0.077 0.923 34 H 0.078 0.922 35 H 0.077 0.923 36 H 0.069 0.931 37 H 0.402 0.598 38 H 0.095 0.905 39 H 0.094 0.906 40 H 0.136 0.864 41 H 0.121 0.879 42 H 0.376 0.624 43 H -0.260 1.260 44 H -0.257 1.257 45 H 0.130 0.870 46 H 0.131 0.869 47 H 0.130 0.870 48 H 0.075 0.925 49 H 0.079 0.921 50 H 0.085 0.915 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.720 6.459 1.726 10.213 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.391 6.391 6 C -0.099 4.099 7 H 0.129 0.871 8 C -0.140 4.140 9 C -0.168 4.168 10 C 0.040 3.960 11 H 0.112 0.888 12 N -0.378 5.378 13 C 0.300 3.700 14 O -0.383 6.383 15 C -0.038 4.038 16 O -0.200 6.200 17 C 0.084 3.916 18 C -0.140 4.140 19 C -0.078 4.078 20 C -0.187 4.187 21 O -0.334 6.334 22 Si 0.591 3.409 23 C -0.171 4.171 24 C -0.091 4.091 25 C -0.225 4.225 26 C -0.162 4.162 27 C -0.146 4.146 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.100 0.900 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.095 0.905 36 H 0.088 0.912 37 H 0.236 0.764 38 H 0.113 0.887 39 H 0.112 0.888 40 H 0.154 0.846 41 H 0.139 0.861 42 H 0.224 0.776 43 H -0.185 1.185 44 H -0.182 1.182 45 H 0.147 0.853 46 H 0.149 0.851 47 H 0.148 0.852 48 H 0.094 0.906 49 H 0.097 0.903 50 H 0.104 0.896 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -6.287 5.499 1.047 8.418 hybrid contribution -0.281 -0.388 1.383 1.464 sum -6.568 5.111 2.430 8.670 Atomic orbital electron populations 1.21818 0.92334 1.03265 1.03612 1.23079 0.95573 0.79900 1.02758 1.86498 1.24437 1.32715 1.83845 1.23733 0.80670 0.92634 0.72312 1.90697 1.60449 1.43143 1.44797 1.21176 0.96872 0.89835 1.02057 0.87072 1.21417 0.91234 0.96924 1.04465 1.21942 1.01907 0.95114 0.97796 1.21096 0.92938 0.82181 0.99826 0.88843 1.45876 1.16706 1.10978 1.64268 1.20042 0.81782 0.90029 0.78109 1.90800 1.58874 1.44423 1.44154 1.22468 0.84576 0.96244 1.00549 1.86176 1.27709 1.28631 1.77534 1.19044 0.92219 0.84289 0.96084 1.20276 0.92090 0.98877 1.02707 1.20105 0.96435 0.92860 0.98437 1.25110 0.87651 1.07702 0.98249 1.86619 1.66179 1.55030 1.25536 0.94946 0.83888 0.77308 0.84780 1.20945 0.96509 0.97491 1.02178 1.20903 0.93995 0.97370 0.96821 1.21298 1.01662 0.92746 1.06772 1.21801 0.93490 0.97341 1.03558 1.21475 1.01806 0.94846 0.96427 0.91386 0.91375 0.90029 0.91108 0.91135 0.90435 0.90353 0.90468 0.91224 0.76358 0.88721 0.88805 0.84593 0.86121 0.77602 1.18479 1.18190 0.85294 0.85085 0.85243 0.90616 0.90262 0.89590 0.90779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.66 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.44 10.12 -39.25 -0.40 -0.84 16 4 C 0.46 0.84 7.26 36.01 0.26 1.10 16 5 O -0.50 -2.57 15.73 -18.74 -0.29 -2.86 16 6 C -0.08 0.10 2.63 -91.77 -0.24 -0.14 16 7 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 8 C -0.10 0.03 4.49 -26.73 -0.12 -0.09 16 9 C -0.13 0.15 5.49 -26.73 -0.15 0.00 16 10 C 0.14 -0.24 2.45 -67.93 -0.17 -0.41 16 11 H 0.09 0.07 7.58 -51.93 -0.39 -0.33 16 12 N -0.72 1.82 5.08 -53.81 -0.27 1.55 16 13 C 0.52 0.47 7.87 -10.98 -0.09 0.39 16 14 O -0.51 -3.13 16.16 -14.35 -0.23 -3.36 16 15 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 16 O -0.29 -0.84 9.67 -39.33 -0.38 -1.22 16 17 C 0.13 0.24 6.69 -39.21 -0.26 -0.03 16 18 C -0.12 -0.28 9.55 -39.43 -0.38 -0.65 16 19 C -0.08 -0.06 5.39 -104.64 -0.56 -0.62 16 20 C -0.08 -0.02 2.82 36.00 0.10 0.08 16 21 O -0.53 -1.02 12.76 -35.23 -0.45 -1.47 16 22 Si 0.69 -0.62 29.79 -169.99 -5.06 -5.68 16 23 C -0.15 0.08 8.67 -39.56 -0.34 -0.26 16 24 C -0.07 0.08 10.04 -39.61 -0.40 -0.32 16 25 C -0.21 0.12 9.04 -39.43 -0.36 -0.24 16 26 C -0.12 0.48 5.39 -26.73 -0.14 0.34 16 27 C -0.11 0.28 5.14 -26.73 -0.14 0.14 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 32 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 33 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 34 H 0.08 0.04 8.10 -51.93 -0.42 -0.38 16 35 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 36 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 37 H 0.40 -2.37 8.60 -40.82 -0.35 -2.72 16 38 H 0.09 -0.37 7.66 -51.93 -0.40 -0.77 16 39 H 0.09 -0.35 7.66 -51.93 -0.40 -0.75 16 40 H 0.14 0.42 8.06 -52.49 -0.42 -0.01 16 41 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 42 H 0.38 -0.37 8.70 45.56 0.40 0.03 16 43 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 44 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 45 H 0.13 -0.30 4.87 -52.48 -0.26 -0.56 16 46 H 0.13 -0.45 8.06 -52.49 -0.42 -0.87 16 47 H 0.13 -0.42 6.30 -52.49 -0.33 -0.76 16 48 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 49 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 50 H 0.09 -0.26 8.11 -51.93 -0.42 -0.69 16 51 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 417.45 15.07 6.29 6.29 Total: 0.00 -11.19 417.45 -11.08 -22.26 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -8.10 Total: -15.00 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: -2.18 Total: 0.34 kcal Atomic # 7 Polarization: 1.82 SS G_CDS: -0.27 Total: 1.55 kcal Atomic # 8 Polarization: -8.00 SS G_CDS: -1.75 Total: -9.75 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.06 Total: -5.68 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -11.19 -11.08 -22.26 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_4860298.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.384 kcal (2) G-P(sol) polarization free energy of solvation -11.185 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -160.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.078 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.263 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds