Wall clock time and date at job start Sun Mar 7 2021 02:32:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45201 * 109.47082 * 2 1 4 4 C 1.34226 * 116.99941 * 180.02562 * 3 2 1 5 5 O 1.20825 * 120.00182 * 359.97438 * 4 3 2 6 6 C 1.50704 * 119.99958 * 180.02562 * 4 3 2 7 7 H 1.09004 * 109.46806 * 299.99473 * 6 4 3 8 8 C 1.52997 * 109.47315 * 59.99392 * 6 4 3 9 9 C 1.52996 * 109.47044 * 180.02562 * 8 6 4 10 10 C 1.52995 * 109.47531 * 299.99910 * 9 8 6 11 11 H 1.09004 * 109.46967 * 300.00239 * 10 9 8 12 12 N 1.46494 * 109.47704 * 179.97438 * 10 9 8 13 13 C 1.34779 * 119.99928 * 84.99905 * 12 10 9 14 14 O 1.21290 * 120.00021 * 0.02562 * 13 12 10 15 15 C 1.50696 * 120.00209 * 180.02562 * 13 12 10 16 16 O 1.42902 * 109.47375 * 180.02562 * 15 13 12 17 17 C 1.35899 * 117.00158 * 180.02562 * 16 15 13 18 18 C 1.38749 * 120.02627 * 179.72760 * 17 16 15 19 19 C 1.50705 * 119.97388 * 0.26465 * 18 17 16 20 20 O 1.42894 * 109.47516 * 285.00644 * 19 18 17 21 21 Si 1.86303 * 109.47138 * 165.00174 * 19 18 17 22 22 C 1.38194 * 120.05431 * 180.27503 * 18 17 16 23 23 C 1.38159 * 120.11035 * 359.97438 * 22 18 17 24 24 C 1.38792 * 120.05062 * 0.02562 * 23 22 18 25 25 O 1.35900 * 120.02304 * 179.97438 * 24 23 22 26 26 C 1.42894 * 117.00302 * 0.02562 * 25 24 23 27 27 C 1.38607 * 119.94873 * 359.97438 * 24 23 22 28 28 C 1.53008 * 109.47011 * 59.99711 * 10 9 8 29 29 C 1.52996 * 109.47209 * 300.00487 * 28 10 9 30 30 H 1.09000 * 109.47370 * 60.00176 * 1 2 3 31 31 H 1.08997 * 109.47004 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47051 * 299.99894 * 1 2 3 33 33 H 1.08999 * 109.47051 * 240.00106 * 2 1 3 34 34 H 1.08998 * 109.47264 * 120.00356 * 2 1 3 35 35 H 1.09005 * 109.47236 * 299.99830 * 8 6 4 36 36 H 1.08990 * 109.47321 * 60.00251 * 8 6 4 37 37 H 1.09002 * 109.47192 * 179.97438 * 9 8 6 38 38 H 1.09004 * 109.47190 * 60.00013 * 9 8 6 39 39 H 0.96999 * 120.00179 * 265.00171 * 12 10 9 40 40 H 1.09003 * 109.47354 * 60.00075 * 15 13 12 41 41 H 1.08997 * 109.47213 * 300.00109 * 15 13 12 42 42 H 1.08999 * 109.46601 * 45.00548 * 19 18 17 43 43 H 0.96703 * 114.00008 * 299.99790 * 20 19 18 44 44 H 1.48496 * 109.99794 * 180.02562 * 21 19 18 45 45 H 1.48501 * 110.00058 * 301.32710 * 21 19 18 46 46 H 1.08008 * 119.94573 * 179.97438 * 22 18 17 47 47 H 1.07993 * 119.97249 * 179.97438 * 23 22 18 48 48 H 1.09006 * 109.47440 * 300.00345 * 26 25 24 49 49 H 1.09004 * 109.47015 * 60.00078 * 26 25 24 50 50 H 1.08996 * 109.47599 * 180.02562 * 26 25 24 51 51 H 1.08003 * 120.06004 * 180.02562 * 27 24 23 52 52 H 1.09004 * 109.46824 * 60.00440 * 28 10 9 53 53 H 1.08998 * 109.46841 * 180.02562 * 28 10 9 54 54 H 1.08998 * 109.47263 * 179.97438 * 29 28 10 55 55 H 1.08998 * 109.47287 * 300.00186 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5867 -0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.5843 3.4701 -0.8896 8 6 3.4496 3.6837 1.2498 9 6 4.0339 5.0977 1.2500 10 6 5.5618 5.0183 1.2490 11 1 5.8985 4.4859 2.1386 12 7 6.1213 6.3722 1.2486 13 6 6.2854 7.0339 2.4112 14 8 5.9702 6.5083 3.4579 15 6 6.8604 8.4269 2.4108 16 8 6.9353 8.9118 3.7529 17 6 7.4347 10.1632 3.9298 18 6 7.5303 10.6986 5.2063 19 6 7.0856 9.8894 6.3974 20 8 5.6578 9.8598 6.4470 21 14 7.7452 10.6660 7.9571 22 6 8.0328 11.9732 5.3864 23 6 8.4417 12.7174 4.2965 24 6 8.3480 12.1863 3.0177 25 8 8.7499 12.9191 1.9460 26 6 9.2590 14.2280 2.2091 27 6 7.8444 10.9081 2.8344 28 6 6.0329 4.2719 -0.0008 29 6 5.4486 2.8579 -0.0010 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5138 0.8900 33 1 1.8933 -0.5138 -0.8900 34 1 1.8933 -0.5139 0.8899 35 1 2.3611 3.7408 1.2503 36 1 3.7859 3.1512 2.1393 37 1 3.6980 5.6296 2.1401 38 1 3.6972 5.6301 0.3604 39 1 6.3737 6.7924 0.4116 40 1 6.2204 9.0840 1.8218 41 1 7.8596 8.4074 1.9756 42 1 7.4672 8.8723 6.3085 43 1 5.2488 10.7325 6.5262 44 1 7.3141 9.8770 9.1389 45 1 9.2278 10.7317 7.9040 46 1 8.1061 12.3884 6.3808 47 1 8.8336 13.7135 4.4398 48 1 8.4905 14.8249 2.7005 49 1 10.1320 14.1547 2.8577 50 1 9.5425 14.7033 1.2701 51 1 7.7711 10.4929 1.8401 52 1 5.6962 4.8043 -0.8904 53 1 7.1214 4.2149 -0.0012 54 1 5.7839 2.3263 -0.8916 55 1 5.7852 2.3256 0.8886 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589458_4974312.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:03 Heat of formation + Delta-G solvation = -207.145434 kcal Electronic energy + Delta-G solvation = -36851.870211 eV Core-core repulsion = 31821.127515 eV Total energy + Delta-G solvation = -5030.742696 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.196 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -41.95454 -41.78152 -41.02273 -39.98725 -39.08649 -38.24848 -37.69457 -36.91166 -35.44903 -32.82462 -32.29299 -31.87698 -31.79014 -31.00067 -29.07203 -28.32233 -26.10992 -25.53795 -23.99209 -23.85497 -23.38995 -22.48345 -22.03871 -21.63643 -20.86540 -19.92982 -18.82038 -18.60066 -18.07713 -17.86768 -17.68955 -17.65439 -17.50541 -17.23034 -16.90252 -16.66358 -16.50215 -16.01506 -15.92566 -15.51866 -15.41183 -15.15861 -15.11076 -14.94573 -14.64305 -14.53970 -14.46026 -14.15175 -13.89640 -13.82884 -13.55303 -13.45245 -13.31604 -13.28312 -13.15655 -12.97263 -12.80261 -12.54892 -12.49630 -12.41113 -12.27041 -12.22705 -12.00650 -11.86567 -11.65921 -11.61746 -11.56758 -11.49705 -11.38363 -10.98391 -10.35469 -10.19252 -9.69258 -9.09429 -5.04245 0.21434 0.30893 1.06373 1.31471 1.41470 1.42399 1.61700 1.64203 1.98360 2.25877 2.55801 2.58974 3.40539 3.47314 3.56831 3.60776 3.63739 3.74382 3.84073 3.87769 3.93944 3.94387 3.99250 4.01527 4.07080 4.09085 4.13806 4.17536 4.25696 4.28560 4.29360 4.35532 4.39354 4.40345 4.44779 4.47780 4.58023 4.61842 4.72654 4.80159 4.81023 4.86421 4.89417 5.00998 5.02752 5.04972 5.06607 5.12412 5.21206 5.23705 5.24349 5.28562 5.39020 5.43611 5.49078 6.13356 6.36961 6.45082 6.62653 6.86684 7.11591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.463 3.537 5 O -0.541 6.541 6 C -0.074 4.074 7 H 0.140 0.860 8 C -0.103 4.103 9 C -0.121 4.121 10 C 0.143 3.857 11 H 0.060 0.940 12 N -0.704 5.704 13 C 0.513 3.487 14 O -0.569 6.569 15 C 0.034 3.966 16 O -0.306 6.306 17 C 0.173 3.827 18 C -0.204 4.204 19 C -0.068 4.068 20 O -0.557 6.557 21 Si 0.794 3.206 22 C -0.032 4.032 23 C -0.238 4.238 24 C 0.164 3.836 25 O -0.331 6.331 26 C 0.016 3.984 27 C -0.253 4.253 28 C -0.112 4.112 29 C -0.100 4.100 30 H 0.071 0.929 31 H 0.095 0.905 32 H 0.067 0.933 33 H 0.069 0.931 34 H 0.063 0.937 35 H 0.087 0.913 36 H 0.053 0.947 37 H 0.052 0.948 38 H 0.096 0.904 39 H 0.422 0.578 40 H 0.123 0.877 41 H 0.121 0.879 42 H 0.080 0.920 43 H 0.391 0.609 44 H -0.304 1.304 45 H -0.280 1.280 46 H 0.166 0.834 47 H 0.161 0.839 48 H 0.071 0.929 49 H 0.068 0.932 50 H 0.116 0.884 51 H 0.153 0.847 52 H 0.104 0.896 53 H 0.085 0.915 54 H 0.082 0.918 55 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.142 9.303 -6.514 11.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.431 6.431 6 C -0.092 4.092 7 H 0.158 0.842 8 C -0.141 4.141 9 C -0.159 4.159 10 C 0.039 3.961 11 H 0.079 0.921 12 N -0.358 5.358 13 C 0.299 3.701 14 O -0.447 6.447 15 C -0.043 4.043 16 O -0.218 6.218 17 C 0.127 3.873 18 C -0.205 4.205 19 C -0.176 4.176 20 O -0.365 6.365 21 Si 0.699 3.301 22 C -0.049 4.049 23 C -0.256 4.256 24 C 0.117 3.883 25 O -0.244 6.244 26 C -0.078 4.078 27 C -0.272 4.272 28 C -0.150 4.150 29 C -0.138 4.138 30 H 0.090 0.910 31 H 0.114 0.886 32 H 0.086 0.914 33 H 0.087 0.913 34 H 0.082 0.918 35 H 0.106 0.894 36 H 0.072 0.928 37 H 0.071 0.929 38 H 0.114 0.886 39 H 0.260 0.740 40 H 0.141 0.859 41 H 0.138 0.862 42 H 0.097 0.903 43 H 0.240 0.760 44 H -0.233 1.233 45 H -0.207 1.207 46 H 0.183 0.817 47 H 0.179 0.821 48 H 0.090 0.910 49 H 0.086 0.914 50 H 0.134 0.866 51 H 0.170 0.830 52 H 0.122 0.878 53 H 0.103 0.897 54 H 0.100 0.900 55 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 0.354 7.691 -5.209 9.295 hybrid contribution 0.294 -0.958 -0.630 1.184 sum 0.647 6.733 -5.839 8.935 Atomic orbital electron populations 1.21821 0.90632 1.04258 1.03771 1.23242 0.96972 0.79447 1.02365 1.86516 1.24322 1.33370 1.83456 1.24358 0.80546 0.93381 0.70968 1.90669 1.61141 1.44520 1.46794 1.21262 0.96596 0.88218 1.03158 0.84190 1.21424 1.02021 0.95235 0.95457 1.21848 0.94410 0.96269 1.03372 1.21040 0.93400 0.81963 0.99742 0.92144 1.45700 1.64618 1.16743 1.08722 1.20476 0.77990 0.87499 0.84095 1.90786 1.51060 1.69501 1.33334 1.22750 1.04620 0.93153 0.83819 1.86225 1.78393 1.28535 1.28631 1.18627 0.91887 0.83289 0.93496 1.19745 1.10278 0.97406 0.93070 1.25122 0.85568 1.02320 1.04609 1.86542 1.17701 1.35551 1.96688 0.94147 0.77631 0.86379 0.71931 1.20860 0.93273 0.90902 0.99849 1.21448 1.09759 1.03438 0.90978 1.18877 0.91932 0.90564 0.86900 1.86053 1.77076 1.29822 1.31433 1.23412 0.99323 0.80080 1.05034 1.20546 1.11995 0.95262 0.99443 1.21745 1.01832 0.94214 0.97185 1.21371 0.91536 0.97389 1.03505 0.91009 0.88600 0.91398 0.91256 0.91807 0.89432 0.92833 0.92918 0.88569 0.73965 0.85916 0.86174 0.90274 0.76011 1.23300 1.20707 0.81689 0.82131 0.91024 0.91364 0.86614 0.82965 0.87782 0.89688 0.89987 0.92617 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.38 10.29 71.98 0.74 1.12 16 2 C 0.05 0.12 6.19 71.98 0.45 0.57 16 3 O -0.36 -1.62 10.12 -51.38 -0.52 -2.14 16 4 C 0.46 2.51 7.26 71.24 0.52 3.03 16 5 O -0.54 -6.51 15.73 21.97 0.35 -6.17 16 6 C -0.07 0.12 2.63 -11.54 -0.03 0.09 16 7 H 0.14 -0.98 8.14 -2.38 -0.02 -1.00 16 8 C -0.10 0.06 5.14 30.59 0.16 0.22 16 9 C -0.12 0.19 5.49 30.59 0.17 0.35 16 10 C 0.14 -0.18 2.45 44.99 0.11 -0.07 16 11 H 0.06 0.35 7.58 -2.38 -0.02 0.33 16 12 N -0.70 2.44 5.08 -442.53 -2.25 0.19 16 13 C 0.51 2.47 7.87 87.66 0.69 3.16 16 14 O -0.57 -9.67 16.16 15.98 0.26 -9.41 16 15 C 0.03 0.00 5.22 71.23 0.37 0.37 16 16 O -0.31 -2.79 9.00 -73.38 -0.66 -3.45 16 17 C 0.17 1.03 6.66 22.49 0.15 1.18 16 18 C -0.20 -0.90 5.27 -19.75 -0.10 -1.01 16 19 C -0.07 -0.44 2.37 71.24 0.17 -0.27 16 20 O -0.56 -4.47 12.88 -148.98 -1.92 -6.39 16 21 Si 0.79 0.78 29.91 68.60 2.05 2.84 16 22 C -0.03 0.04 8.65 22.24 0.19 0.24 16 23 C -0.24 0.47 9.04 22.38 0.20 0.67 16 24 C 0.16 0.20 6.68 22.49 0.15 0.35 16 25 O -0.33 -0.08 10.49 -92.42 -0.97 -1.05 16 26 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 27 C -0.25 -0.54 8.97 22.46 0.20 -0.34 16 28 C -0.11 0.72 5.39 30.60 0.16 0.89 16 29 C -0.10 0.17 4.50 30.59 0.14 0.31 16 30 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 31 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 32 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 33 H 0.07 0.16 8.13 -2.39 -0.02 0.14 16 34 H 0.06 0.22 8.13 -2.39 -0.02 0.20 16 35 H 0.09 -0.11 8.11 -2.38 -0.02 -0.13 16 36 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 37 H 0.05 0.22 8.14 -2.39 -0.02 0.20 16 38 H 0.10 -0.61 8.14 -2.38 -0.02 -0.63 16 39 H 0.42 -4.91 8.60 -92.71 -0.80 -5.71 16 40 H 0.12 -0.73 7.66 -2.39 -0.02 -0.75 16 41 H 0.12 -0.70 7.66 -2.39 -0.02 -0.71 16 42 H 0.08 0.99 7.83 -2.39 -0.02 0.97 16 43 H 0.39 -0.81 8.70 -74.06 -0.64 -1.46 16 44 H -0.30 -2.80 7.11 99.48 0.71 -2.10 16 45 H -0.28 -1.32 7.11 99.48 0.71 -0.61 16 46 H 0.17 -1.29 5.12 -2.91 -0.01 -1.31 16 47 H 0.16 -1.23 6.29 -2.91 -0.02 -1.25 16 48 H 0.07 -0.67 7.66 -2.38 -0.02 -0.69 16 49 H 0.07 -0.60 7.66 -2.38 -0.02 -0.62 16 50 H 0.12 -1.15 8.14 -2.39 -0.02 -1.17 16 51 H 0.15 -0.35 6.30 -2.91 -0.02 -0.37 16 52 H 0.10 -1.21 8.14 -2.38 -0.02 -1.23 16 53 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 54 H 0.08 -0.12 8.10 -2.39 -0.02 -0.14 16 55 H 0.05 0.16 8.10 -2.39 -0.02 0.14 16 Total: 0.00 -34.40 446.53 1.41 -33.00 By element: Atomic # 1 Polarization: -18.77 SS G_CDS: -0.48 Total: -19.25 kcal Atomic # 6 Polarization: 6.29 SS G_CDS: 5.55 Total: 11.83 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -2.25 Total: 0.19 kcal Atomic # 8 Polarization: -25.14 SS G_CDS: -3.47 Total: -28.60 kcal Atomic # 14 Polarization: 0.78 SS G_CDS: 2.05 Total: 2.84 kcal Total: -34.40 1.41 -33.00 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_4974312.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -174.148 kcal (2) G-P(sol) polarization free energy of solvation -34.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -208.551 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.997 kcal (6) G-S(sol) free energy of system = (1) + (5) -207.145 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds